BLASTX nr result

ID: Coptis25_contig00001561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001561
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256...   106   7e-21
gb|ABK20308.1| Myb transcription factor [Malus x domestica] gi|3...    96   1e-17
gb|ADP09382.1| Myb transcription factor, partial [Pyrus pyrifolia]     95   3e-17
ref|XP_002312135.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
emb|CCA29114.1| putative MYB transcription factor [Rosa hybrid c...    84   6e-14

>ref|XP_002276375.1| PREDICTED: uncharacterized protein LOC100256309 [Vitis vinifera]
           gi|297740274|emb|CBI30456.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score =  106 bits (265), Expect = 7e-21
 Identities = 54/99 (54%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   VEFEEPPYFSSHELASIATDLSKIAWLKSGLENSNTK--GNAGSSCVMPQGACLEMGNLK 174
           VEF EPP FSS ELA+IATD+S IAWLKSGLENS  +  G+A     M +G+ ++M   +
Sbjct: 308 VEFSEPPPFSSFELAAIATDISNIAWLKSGLENSTVRVMGDAAGR-TMSRGSQVQMARFE 366

Query: 175 ESRMNELMRFEEGRIRVMGLMTDVMSTQMSSETFALPAR 291
           ESR N+ +RFEEG+ ++MG+MTDV STQ+  ++F++PA+
Sbjct: 367 ESRKNDHLRFEEGKNKLMGMMTDVRSTQIGKQSFSVPAK 405


>gb|ABK20308.1| Myb transcription factor [Malus x domestica]
           gi|302398917|gb|ADL36753.1| MYB domain class
           transcription factor [Malus x domestica]
          Length = 412

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 52/98 (53%), Positives = 70/98 (71%), Gaps = 3/98 (3%)
 Frame = +1

Query: 1   VEFEEPPYFSSHELASIATDLSKIAWLKSGLENSNTK--GNAGSSCVMPQGAC-LEMGNL 171
           VE++EP  FSSHEL SIATDL+KIAW+K GLE++  +   +  S  V    A  L+MG  
Sbjct: 308 VEYDEPLPFSSHELISIATDLNKIAWIKGGLESNGIRMPEHVASQRVFQAAATTLQMGLP 367

Query: 172 KESRMNELMRFEEGRIRVMGLMTDVMSTQMSSETFALP 285
             + MN+ MRFEEGR ++MG+MTDV+STQ+  +TFA+P
Sbjct: 368 ANTPMNDHMRFEEGRNKLMGMMTDVLSTQVPRQTFAMP 405


>gb|ADP09382.1| Myb transcription factor, partial [Pyrus pyrifolia]
          Length = 173

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
 Frame = +1

Query: 1   VEFEEPPYFSSHELASIATDLSKIAWLKSGLENSNTK---GNAGSSCVMPQGACLEMGNL 171
           VE++EP  FSSHEL SIATDL+KIAW+KSGLE++  +     A           L+MG  
Sbjct: 69  VEYDEPLPFSSHELISIATDLNKIAWIKSGLESNGIRMPESVASQRVFQAAATTLQMGLP 128

Query: 172 KESRMNELMRFEEGRIRVMGLMTDVMSTQMSSETFALP 285
             + MN+ M FEEGR ++MG+MTDV+STQ+  +TFA+P
Sbjct: 129 ANTPMNDHMCFEEGRNKLMGMMTDVLSTQVPRQTFAMP 166


>ref|XP_002312135.1| predicted protein [Populus trichocarpa] gi|222851955|gb|EEE89502.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 51/91 (56%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
 Frame = +1

Query: 1   VEFEEPPYFSSHELASIATDLSKIAWLKSGLENSNT--KGNAGSSCVMPQGACL--EMGN 168
           VE+EEPP FSS EL SIATDL+ IAW+KSGLENS+T    NA +S  M QG  +  +MG 
Sbjct: 218 VEYEEPPPFSSQELISIATDLNNIAWMKSGLENSSTGIPSNA-ASYRMSQGTPVDSQMGM 276

Query: 169 LKESRMNELMRFEEGRIRVMGLMTDVMSTQM 261
            +++  N  M FEEGR R+MG M   +STQM
Sbjct: 277 SEQNLRNGHMHFEEGRSRLMGTMAGTISTQM 307


>emb|CCA29114.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 284

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   VEFEEPPYFSSHELASIATDLSKIAWLKSGLENSNTKGNAGSSCVMPQGACL-EMGNLKE 177
           VEF EPP F S ELA+IATD+S +AWLKSGLENS+ +    ++  +P  A   ++G+ +E
Sbjct: 199 VEFSEPPCFPSFELAAIATDISNLAWLKSGLENSSARVTGDAAGSIPSHASQGQLGHFEE 258

Query: 178 SRMNELMRFEEGRIRVMGLMTDVMST 255
           SRMN L   EE + R+M + T+V+ST
Sbjct: 259 SRMNHLFHHEERKDRLMSMKTNVLST 284


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