BLASTX nr result

ID: Coptis25_contig00001559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001559
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517125.1| PREDICTED: phosphoenolpyruvate carboxykinase...   405   e-111
dbj|BAB43907.1| phosphoenolpyruvate carboxykinase [Flaveria trin...   402   e-110
dbj|BAB43909.1| phosphoenolpyruvate carboxykinase [Flaveria prin...   401   e-109
ref|XP_002302349.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
dbj|BAB43908.1| phosphoenolpyruvate carboxykinase [Flaveria trin...   401   e-109

>ref|XP_003517125.1| PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Glycine
           max]
          Length = 660

 Score =  405 bits (1041), Expect = e-111
 Identities = 212/278 (76%), Positives = 232/278 (83%), Gaps = 3/278 (1%)
 Frame = -1

Query: 825 MASNGNGKVVATSNGNGEFSFGTGRNGLAKIQTQKKPTNGICHDDSSAPVKAQTVDELHS 646
           MASNGNG V   +NGNG     + RNGLAKIQTQKK  +GICHDDS   VKAQT+DELHS
Sbjct: 1   MASNGNGSV---ANGNG-----SARNGLAKIQTQKKH-DGICHDDSGPTVKAQTIDELHS 51

Query: 645 LQKKKSAPTTPIDGAQGAF-TMSEEERHKXXXXXXXXXXXXLTRETGPKLVKGDPAKKSD 469
           LQKKKSAPTTP+ G Q  F T++EEERHK            LTRETGPKLVKGDPA+KSD
Sbjct: 52  LQKKKSAPTTPVTGFQAPFATLTEEERHKQQLQSISASLASLTRETGPKLVKGDPARKSD 111

Query: 468 GPKVAH--HHVTTPNLNLSTSDSALKFTHILYNLSPAELYEQAIKYEHGSFITASGALAT 295
             KV H  HHV+TP + +S  DS+LKFTH+LYNLSPAELYEQAIKYE GSFIT++GALAT
Sbjct: 112 TQKVTHVHHHVSTPTIVVS--DSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALAT 169

Query: 294 LSGAKTGRSPRDKRVVRDDTTEDELWWGKGSPNIEMDGETFLVNRERAVDYLNSLDKVFV 115
           LSGAKTGRSPRDKRVV+DD TE+ELWWGKGSPNIEMD  TF+VNRERAVDYLNSLDKVFV
Sbjct: 170 LSGAKTGRSPRDKRVVKDDLTENELWWGKGSPNIEMDEHTFMVNRERAVDYLNSLDKVFV 229

Query: 114 NDQFLNWDPEHQIKVRIVSARAYHSLFMHNMCIRPTPE 1
           NDQFLNWD E++IKVRIVSARAYHSLFMHNMCIRPTPE
Sbjct: 230 NDQFLNWDTENRIKVRIVSARAYHSLFMHNMCIRPTPE 267


>dbj|BAB43907.1| phosphoenolpyruvate carboxykinase [Flaveria trinervia]
          Length = 662

 Score =  402 bits (1034), Expect = e-110
 Identities = 208/278 (74%), Positives = 231/278 (83%), Gaps = 3/278 (1%)
 Frame = -1

Query: 825 MASNGNGKVVATSNGNGEFSFGTGRNGLAKIQTQKKPTNGICHDDSSAPVKAQTVDELHS 646
           MASNGNG V     G G    G GRNGL KIQTQK+  NGICHDDSSAPVK QT+DELHS
Sbjct: 1   MASNGNGNVA----GKGNVVSG-GRNGLPKIQTQKRQ-NGICHDDSSAPVKVQTIDELHS 54

Query: 645 LQKKKSAPTTPIDGAQGAFT-MSEEERHKXXXXXXXXXXXXLTRETGPKLVKGDPAKKSD 469
           LQ+KKSAPTTP+DG QGAF  MSE++R K            LTRETGPK+V+GDPA++ +
Sbjct: 55  LQRKKSAPTTPLDGVQGAFANMSEDDRQKQQLQSISASLASLTRETGPKVVRGDPARRPE 114

Query: 468 GPKVAH--HHVTTPNLNLSTSDSALKFTHILYNLSPAELYEQAIKYEHGSFITASGALAT 295
            P+VAH   H  TP    + SDS+LKFTH+LYNLSPAELYEQAIKYE GSFIT+SGALAT
Sbjct: 115 TPRVAHGPDHYFTPTF--AASDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSSGALAT 172

Query: 294 LSGAKTGRSPRDKRVVRDDTTEDELWWGKGSPNIEMDGETFLVNRERAVDYLNSLDKVFV 115
           LSGAKTGRSP+DKRVVRDD TE+ELWWGKGSPNIEMD +TFLVNRERAVDYLNSL+KVFV
Sbjct: 173 LSGAKTGRSPKDKRVVRDDVTENELWWGKGSPNIEMDEQTFLVNRERAVDYLNSLEKVFV 232

Query: 114 NDQFLNWDPEHQIKVRIVSARAYHSLFMHNMCIRPTPE 1
           NDQFLNWDPE++IKVRIVSARAYHSLFMHNMCIRP+PE
Sbjct: 233 NDQFLNWDPENRIKVRIVSARAYHSLFMHNMCIRPSPE 270


>dbj|BAB43909.1| phosphoenolpyruvate carboxykinase [Flaveria pringlei]
          Length = 658

 Score =  401 bits (1031), Expect = e-109
 Identities = 206/278 (74%), Positives = 228/278 (82%), Gaps = 3/278 (1%)
 Frame = -1

Query: 825 MASNGNGKVVATSNGNGEFSFGTGRNGLAKIQTQKKPTNGICHDDSSAPVKAQTVDELHS 646
           MASNGNG V    NG         RNGL KIQTQK+  NGICHDDSSAPVK QT+DELHS
Sbjct: 1   MASNGNGNVAGKGNG---------RNGLPKIQTQKRQ-NGICHDDSSAPVKVQTIDELHS 50

Query: 645 LQKKKSAPTTPIDGAQGAFT-MSEEERHKXXXXXXXXXXXXLTRETGPKLVKGDPAKKSD 469
           LQ+KKSAPTTP+DG QGAF   SE+ER K            LTRETGPK+V+GDPA++ +
Sbjct: 51  LQRKKSAPTTPLDGVQGAFANFSEDERQKQQLQSISASLASLTRETGPKVVRGDPARRPE 110

Query: 468 GPKVAH--HHVTTPNLNLSTSDSALKFTHILYNLSPAELYEQAIKYEHGSFITASGALAT 295
            P+VAH   H  TP    + SDS+LKFTH+LYNLSPAELYEQAIKYE GSFIT+SGALAT
Sbjct: 111 TPRVAHGPDHYFTPTF--AASDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSSGALAT 168

Query: 294 LSGAKTGRSPRDKRVVRDDTTEDELWWGKGSPNIEMDGETFLVNRERAVDYLNSLDKVFV 115
           LSGAKTGRSP+DKRVVRDD TE+ELWWGKGSPNIEMD +TFLVNRERAVDYLNSL+KVFV
Sbjct: 169 LSGAKTGRSPKDKRVVRDDVTENELWWGKGSPNIEMDEQTFLVNRERAVDYLNSLEKVFV 228

Query: 114 NDQFLNWDPEHQIKVRIVSARAYHSLFMHNMCIRPTPE 1
           NDQFLNWDPE++IKVRIVSARAYHSLFMHNMCIRP+PE
Sbjct: 229 NDQFLNWDPENRIKVRIVSARAYHSLFMHNMCIRPSPE 266


>ref|XP_002302349.1| predicted protein [Populus trichocarpa] gi|222844075|gb|EEE81622.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  401 bits (1031), Expect = e-109
 Identities = 204/269 (75%), Positives = 222/269 (82%), Gaps = 9/269 (3%)
 Frame = -1

Query: 780 NGEFSFG------TGRNGLAKIQTQ--KKPTNGICHDDSSAPVKAQTVDELHSLQKKKSA 625
           NGEFSF       TGR GL KIQTQ   K  N +CHDDS  PVKA+T+DELHSLQ+KKSA
Sbjct: 8   NGEFSFASNTPRSTGRKGLPKIQTQDHNKKANDVCHDDSGTPVKAKTIDELHSLQRKKSA 67

Query: 624 PTTPIDGAQGAFT-MSEEERHKXXXXXXXXXXXXLTRETGPKLVKGDPAKKSDGPKVAHH 448
           PTTPI GAQGAF  +SEEER K            L RETGPKLVKGDPA+K +G ++AHH
Sbjct: 68  PTTPIKGAQGAFNAISEEERQKQQLQSISASLASLMRETGPKLVKGDPARKGEGQQIAHH 127

Query: 447 HVTTPNLNLSTSDSALKFTHILYNLSPAELYEQAIKYEHGSFITASGALATLSGAKTGRS 268
           H  TP +  S +DS+LKFTH L+NLSPAELYEQAIKYE GSFI +SGALATLSGAKTGRS
Sbjct: 128 HHYTPTI--SATDSSLKFTHYLHNLSPAELYEQAIKYEKGSFIASSGALATLSGAKTGRS 185

Query: 267 PRDKRVVRDDTTEDELWWGKGSPNIEMDGETFLVNRERAVDYLNSLDKVFVNDQFLNWDP 88
           PRDKRVVRD+TTED+LWWGKGSPNIEMD  TF+VNRERAVDYLNSLDKVFVNDQFLNWDP
Sbjct: 186 PRDKRVVRDETTEDDLWWGKGSPNIEMDEHTFMVNRERAVDYLNSLDKVFVNDQFLNWDP 245

Query: 87  EHQIKVRIVSARAYHSLFMHNMCIRPTPE 1
           EH+IKVRIVSARAYHSLFMHNMCIRPTPE
Sbjct: 246 EHRIKVRIVSARAYHSLFMHNMCIRPTPE 274


>dbj|BAB43908.1| phosphoenolpyruvate carboxykinase [Flaveria trinervia]
          Length = 662

 Score =  401 bits (1030), Expect = e-109
 Identities = 205/278 (73%), Positives = 230/278 (82%), Gaps = 3/278 (1%)
 Frame = -1

Query: 825 MASNGNGKVVATSNGNGEFSFGTGRNGLAKIQTQKKPTNGICHDDSSAPVKAQTVDELHS 646
           MAS+GNG V    N     +   GRNGL KIQTQK+  NGICHDDSSAPVK QT+DELHS
Sbjct: 1   MASSGNGNVAGKGN-----AVSGGRNGLPKIQTQKRQ-NGICHDDSSAPVKVQTIDELHS 54

Query: 645 LQKKKSAPTTPIDGAQGAFT-MSEEERHKXXXXXXXXXXXXLTRETGPKLVKGDPAKKSD 469
           LQ+KKSAPTTP+DG QGAF  MSE++R K            LTRETGPK+V+GDPA++ +
Sbjct: 55  LQRKKSAPTTPLDGVQGAFANMSEDDRQKQQLQSISASLASLTRETGPKVVRGDPARRPE 114

Query: 468 GPKVAH--HHVTTPNLNLSTSDSALKFTHILYNLSPAELYEQAIKYEHGSFITASGALAT 295
            P+VAH   H  TP    + SDS+LKFTH+LYNLSPAELYEQAIKYE GSFIT+SGALAT
Sbjct: 115 TPRVAHGPDHYFTPTF--AASDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSSGALAT 172

Query: 294 LSGAKTGRSPRDKRVVRDDTTEDELWWGKGSPNIEMDGETFLVNRERAVDYLNSLDKVFV 115
           LSGAKTGRSP+DKRVVRDD TE+ELWWGKGSPNIEMD +TFLVNRERAVDYLNSL+KVFV
Sbjct: 173 LSGAKTGRSPKDKRVVRDDVTENELWWGKGSPNIEMDEQTFLVNRERAVDYLNSLEKVFV 232

Query: 114 NDQFLNWDPEHQIKVRIVSARAYHSLFMHNMCIRPTPE 1
           NDQFLNWDPE++IKVRIVSARAYHSLFMHNMCIRP+PE
Sbjct: 233 NDQFLNWDPENRIKVRIVSARAYHSLFMHNMCIRPSPE 270


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