BLASTX nr result

ID: Coptis25_contig00001550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001550
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   159   3e-37
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   156   3e-36
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   155   5e-36
ref|XP_003632834.1| PREDICTED: putative disease resistance prote...   152   5e-35
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   150   2e-34

>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 923

 Score =  159 bits (402), Expect = 3e-37
 Identities = 87/221 (39%), Positives = 124/221 (56%), Gaps = 27/221 (12%)
 Frame = +2

Query: 2    LKRCFSYCVVFRQDAEIDKDELIKLWMAQGFFSYDSSKDLEKIGTNYFNDLAMRSLFQDF 181
            ++RCFS+C VF +D+ I++DELIKLWMAQ +   D SK++E +G  YF  LA RS FQDF
Sbjct: 425  IQRCFSFCAVFPKDSVIERDELIKLWMAQSYLKSDGSKEMEMVGRTYFEYLAARSFFQDF 484

Query: 182  KKDSEGNVIGCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGVANGSS- 343
            +KD +GN+I CKMHD+VHDFAQ L  +E  I   ++++ G++     K+RH  +    S 
Sbjct: 485  EKDDDGNIIHCKMHDIVHDFAQFLTLNECFIVEVDNQKKGSMDLFFQKIRHATLVVREST 544

Query: 344  --------------------MSDDIKLQLCQMTCLRVLDLCDTSL-EELPDEVEXXXXXX 460
                                    +   L  +TCLR LDL    L EELP EV       
Sbjct: 545  PNFASTCNMKNLHTLLAKRAFDSRVLEALGHLTCLRALDLRSNQLIEELPKEVGKLIHLR 604

Query: 461  XXXXSFNRKMKKLPETVCNLFNLQTLKLNWCDLSENYPKEL 583
                S+   +++LPET+C+L+NLQTL +  C   +  P+ +
Sbjct: 605  YLNLSYCDSLRELPETICDLYNLQTLNIQACSRLQKLPQAM 645


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  156 bits (394), Expect = 3e-36
 Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 32/226 (14%)
 Frame = +2

Query: 2    LKRCFSYCVVFRQDAEIDKDELIKLWMAQGFFSYDSSKDLEKIGTNYFNDLAMRSLFQDF 181
            ++RCFS+C VF +D+ I  DELIKLWMAQ + + D SK++E +G  YF  LA RS FQDF
Sbjct: 424  IQRCFSFCAVFPKDSVIWSDELIKLWMAQSYLNSDRSKEMEMVGRTYFEYLAARSFFQDF 483

Query: 182  KKDSEGNVIGCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGVA----- 331
            +KD +GN+I CKMHD+VHDFAQ L ++E  I   ++++ G++     K+RH  +      
Sbjct: 484  EKDDDGNIICCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVREST 543

Query: 332  ---------------------NGSSMSDDIKLQLCQMTCLRVLDLCDTSL-EELPDEVEX 445
                                 + S + + +   L  +TCLR LDL    L EELP EV  
Sbjct: 544  PNFASTCNMKNLHTLLAKEEFBISXVLEALXNLLRHLTCLRALDLSRNRLIEELPKEVGK 603

Query: 446  XXXXXXXXXSFNRKMKKLPETVCNLFNLQTLKLNWCDLSENYPKEL 583
                     S   ++++LPET+C+L+NLQTL +  C   +  P+ +
Sbjct: 604  LIHLRYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAM 649


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 919

 Score =  155 bits (392), Expect = 5e-36
 Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 28/222 (12%)
 Frame = +2

Query: 2    LKRCFSYCVVFRQDAEIDKDELIKLWMAQGFFSYDSSKDLEKIGTNYFNDLAMRSLFQDF 181
            +KRCFS+C VF +D+ I++DELIKLWMAQ +   D SK++E +G  YF  LA RS FQDF
Sbjct: 424  IKRCFSFCAVFPKDSVIERDELIKLWMAQSYLKSDGSKEMEMVGREYFEYLAARSFFQDF 483

Query: 182  KKDSEGNVIGCKMHDLVHDFAQHLAKSESSIFMKNDREVG-------------------- 301
            +KD + ++I CKMHD+VHDFAQ L ++E  +   ++++ G                    
Sbjct: 484  EKDGDDDIIRCKMHDIVHDFAQFLTQNECFVVEVDNQKKGSMDLFFQKICHATLVVQEST 543

Query: 302  -------NIKLRHFGVANGSSMSDDIKLQLCQMTCLRVLDLC-DTSLEELPDEVEXXXXX 457
                   N+K  H  +A  S+    +   L  +TCLR LDL  +  +EELP EV      
Sbjct: 544  LNFASTCNMKNLHTLLAK-SAFDSRVLEALGHLTCLRALDLSWNQLIEELPKEVGKLIHL 602

Query: 458  XXXXXSFNRKMKKLPETVCNLFNLQTLKLNWCDLSENYPKEL 583
                 S  + +++LPET+C+L+NLQTL + +C   +  P+ +
Sbjct: 603  RYLDLSRCQSLRELPETICDLYNLQTLNIQYCISLQKLPQAM 644


>ref|XP_003632834.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 904

 Score =  152 bits (383), Expect = 5e-35
 Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 27/218 (12%)
 Frame = +2

Query: 2    LKRCFSYCVVFRQDAEIDKDELIKLWMAQGFFSYDSSKDLEKIGTNYFNDLAMRSLFQDF 181
            ++RCFS+C VF +D+ I + ELIKLWMAQ +   D  K++E +G  YF  LA RS FQDF
Sbjct: 405  IQRCFSFCAVFPKDSVIVRAELIKLWMAQSYLKSDGRKEMEMVGRTYFEYLAARSFFQDF 464

Query: 182  KKDSEGNVIGCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGVANGSS- 343
            +KD++GN+I C+MHD+VHDFAQ L ++E  I   ++++ G++     K+RH  +    S 
Sbjct: 465  EKDTDGNIIRCEMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVREST 524

Query: 344  --------------------MSDDIKLQLCQMTCLRVLDLCDTS-LEELPDEVEXXXXXX 460
                                    +   L  +TCLR LDL     +EELP EV       
Sbjct: 525  PNFASTCNMKNLHTLLAKEAFDSRVLEALGNLTCLRALDLSSNDWIEELPKEVGKLIHLR 584

Query: 461  XXXXSFNRKMKKLPETVCNLFNLQTLKLNWCDLSENYP 574
                S+   +++LPET+C+L+NLQTL +  C   +  P
Sbjct: 585  YLNLSWCESLRELPETICDLYNLQTLNIEGCSSLQKLP 622


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 922

 Score =  150 bits (378), Expect = 2e-34
 Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 27/211 (12%)
 Frame = +2

Query: 2    LKRCFSYCVVFRQDAEIDKDELIKLWMAQGFFSYDSSKDLEKIGTNYFNDLAMRSLFQDF 181
            ++RCFS+C VF +D+ I + ELIKLWMAQ +   D  K++E +G  YF  LA RS FQDF
Sbjct: 424  IQRCFSFCAVFPKDSVIVRAELIKLWMAQSYLKSDGCKEMEMVGRTYFEYLAARSFFQDF 483

Query: 182  KKDSEGNVIGCKMHDLVHDFAQHLAKSESSIFMKNDREVGNI-----KLRHFGVANGSS- 343
            +KD +GN+I CKMHD+VHDFAQ L ++E  I   ++++ G++     K+RH  +    S 
Sbjct: 484  EKDDDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVREST 543

Query: 344  --------------------MSDDIKLQLCQMTCLRVLDLCDTSL-EELPDEVEXXXXXX 460
                                    +   L  +TCLR LDL    L EELP EV       
Sbjct: 544  PNFASTCNMKNLHTLLAKKAFDSRVLEALGNLTCLRALDLSRNRLIEELPKEVGKLIHLR 603

Query: 461  XXXXSFNRKMKKLPETVCNLFNLQTLKLNWC 553
                S    +++LPET+C+L+NLQTL +  C
Sbjct: 604  YLNLSLCYSLRELPETICDLYNLQTLNIQGC 634


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