BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001547
         (1468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   223   1e-55
emb|CBI29028.3| unnamed protein product [Vitis vinifera]              223   1e-55
ref|XP_002521533.1| ring finger protein, putative [Ricinus commu...   218   2e-54
ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   216   9e-54
ref|XP_003592714.1| RING finger protein [Medicago truncatula] gi...   216   9e-54

>ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
          Length = 452

 Score =  223 bits (568), Expect = 1e-55
 Identities = 118/191 (61%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
 Frame = +3

Query: 591  EEDAFDVHXXXXXXXXXXXXXX-DPSAFSSDEAFARALQDAEERELAVRLMALTGVNDIT 767
            +EDAFDVH               DP+ FSSDEA+ARALQ  EE+E+A RL+AL G++D  
Sbjct: 277  DEDAFDVHAQADDGEDDNPTIEFDPAVFSSDEAYARALQHIEEQEMAARLLALAGIHDHG 336

Query: 768  GWVAXXXXXXXXXXXXXWEEVDPDELSYEELIALGEVVGTESRGLSADTIASLPSVTYKA 947
                             WEEVDPDELSYEEL+ALGEV+GTESRGLS+DTIASLPSVTYKA
Sbjct: 337  ---VEDTEDHGGNSQDTWEEVDPDELSYEELLALGEVIGTESRGLSSDTIASLPSVTYKA 393

Query: 948  QSNQDGSAEQCVICRXXXXXXXXXXXXXXEYEDEDTLTVLSCKHSYHSECINNWLQINKV 1127
            QSNQ+GS + CVICR              +YED +TLTVLSCKHSYHSECINNWLQINKV
Sbjct: 394  QSNQEGSNDSCVICR-------------LDYEDGETLTVLSCKHSYHSECINNWLQINKV 440

Query: 1128 CPVCSTEVSTS 1160
            CP+CSTEVS+S
Sbjct: 441  CPICSTEVSSS 451



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 4/45 (8%)
 Frame = +2

Query: 227 PESN----RQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMN 349
           P SN    RQ+SRTPFTNLSQVDAD+ALARTLQEQERAYMMLR+N
Sbjct: 186 PNSNQAPPRQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRIN 230


>emb|CBI29028.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  223 bits (568), Expect = 1e-55
 Identities = 118/191 (61%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
 Frame = +3

Query: 591  EEDAFDVHXXXXXXXXXXXXXX-DPSAFSSDEAFARALQDAEERELAVRLMALTGVNDIT 767
            +EDAFDVH               DP+ FSSDEA+ARALQ  EE+E+A RL+AL G++D  
Sbjct: 133  DEDAFDVHAQADDGEDDNPTIEFDPAVFSSDEAYARALQHIEEQEMAARLLALAGIHDHG 192

Query: 768  GWVAXXXXXXXXXXXXXWEEVDPDELSYEELIALGEVVGTESRGLSADTIASLPSVTYKA 947
                             WEEVDPDELSYEEL+ALGEV+GTESRGLS+DTIASLPSVTYKA
Sbjct: 193  ---VEDTEDHGGNSQDTWEEVDPDELSYEELLALGEVIGTESRGLSSDTIASLPSVTYKA 249

Query: 948  QSNQDGSAEQCVICRXXXXXXXXXXXXXXEYEDEDTLTVLSCKHSYHSECINNWLQINKV 1127
            QSNQ+GS + CVICR              +YED +TLTVLSCKHSYHSECINNWLQINKV
Sbjct: 250  QSNQEGSNDSCVICR-------------LDYEDGETLTVLSCKHSYHSECINNWLQINKV 296

Query: 1128 CPVCSTEVSTS 1160
            CP+CSTEVS+S
Sbjct: 297  CPICSTEVSSS 307



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 4/45 (8%)
 Frame = +2

Query: 227 PESN----RQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMN 349
           P SN    RQ+SRTPFTNLSQVDAD+ALARTLQEQERAYMMLR+N
Sbjct: 42  PNSNQAPPRQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRIN 86


>ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
            gi|223539211|gb|EEF40804.1| ring finger protein, putative
            [Ricinus communis]
          Length = 316

 Score =  218 bits (556), Expect = 2e-54
 Identities = 117/191 (61%), Positives = 133/191 (69%)
 Frame = +3

Query: 588  EEEDAFDVHXXXXXXXXXXXXXXDPSAFSSDEAFARALQDAEERELAVRLMALTGVNDIT 767
            ++ DAFDVH              DP  FSSDEA+ARALQDAEERE+A RL+A  G+ND  
Sbjct: 145  DDVDAFDVHESGGAAADL-----DPCMFSSDEAYARALQDAEEREMAARLLAFAGIND-- 197

Query: 768  GWVAXXXXXXXXXXXXXWEEVDPDELSYEELIALGEVVGTESRGLSADTIASLPSVTYKA 947
                             WEEVDPDELSYEELIALGEVVG+ESRGLSADTIASLP+V YKA
Sbjct: 198  --QVEDTDDHGGNSQDAWEEVDPDELSYEELIALGEVVGSESRGLSADTIASLPTVNYKA 255

Query: 948  QSNQDGSAEQCVICRXXXXXXXXXXXXXXEYEDEDTLTVLSCKHSYHSECINNWLQINKV 1127
             S+Q+G+ + CVICR              +YED +TLT+LSCKHSYHSECINNWL+INKV
Sbjct: 256  GSSQNGTNDSCVICR-------------LDYEDGETLTLLSCKHSYHSECINNWLKINKV 302

Query: 1128 CPVCSTEVSTS 1160
            CPVCSTEVSTS
Sbjct: 303  CPVCSTEVSTS 313



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +2

Query: 224 EPESNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNS 352
           +P     + RTPFTNLSQVDAD+ALARTLQEQERAYMMLR N+
Sbjct: 50  DPPRQSSSRRTPFTNLSQVDADLALARTLQEQERAYMMLRFNN 92


>ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 2
            [Glycine max]
          Length = 341

 Score =  216 bits (551), Expect = 9e-54
 Identities = 114/198 (57%), Positives = 133/198 (67%), Gaps = 4/198 (2%)
 Frame = +3

Query: 579  EHDEEEDAFDVHXXXXXXXXXXXXXX-DPSAFSSDEAFARALQDAEERELAVRLMALTGV 755
            E DE+EDAFDVH               DP  FSSDEA+ARALQ+AEERE+A RL+A  G+
Sbjct: 153  EEDEDEDAFDVHAHASAGEHDNPTIEFDPDVFSSDEAYARALQEAEEREMAARLLAFAGI 212

Query: 756  NDITGWVAXXXXXXXXXXXXX---WEEVDPDELSYEELIALGEVVGTESRGLSADTIASL 926
            ND++  ++                WE+VDPDELSYEEL+ALGE VGTESRGLS DTIA L
Sbjct: 213  NDLSFSISGEEEDIEEHGANSQDAWEDVDPDELSYEELLALGEAVGTESRGLSTDTIACL 272

Query: 927  PSVTYKAQSNQDGSAEQCVICRXXXXXXXXXXXXXXEYEDEDTLTVLSCKHSYHSECINN 1106
            PSV YK  S+Q GS + CVICR              +YED+++LTVLSCKH YH ECINN
Sbjct: 273  PSVNYKTGSDQHGSNDSCVICR-------------VDYEDDESLTVLSCKHLYHPECINN 319

Query: 1107 WLQINKVCPVCSTEVSTS 1160
            WL+INKVCPVCSTEVS S
Sbjct: 320  WLKINKVCPVCSTEVSAS 337



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +2

Query: 218 EIEPESNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNS 352
           E E   +RQ SRTPFTNLSQVDAD+ALARTLQEQERAYMMLRMN+
Sbjct: 64  EGEQTGSRQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNN 108


>ref|XP_003592714.1| RING finger protein [Medicago truncatula] gi|355481762|gb|AES62965.1|
            RING finger protein [Medicago truncatula]
          Length = 339

 Score =  216 bits (551), Expect = 9e-54
 Identities = 116/197 (58%), Positives = 135/197 (68%), Gaps = 5/197 (2%)
 Frame = +3

Query: 585  DEEEDAFDVHXXXXXXXXXXXXXX--DPSAFSSDEAFARALQDAEERELAVRLMALTGVN 758
            DE+EDAFDVH                DP  FSSDEA+ARALQ+AEERE+A RL+AL G++
Sbjct: 152  DEDEDAFDVHDHASVGDRENNPVIEFDPELFSSDEAYARALQEAEEREMAARLLALAGIH 211

Query: 759  DITGWV---AXXXXXXXXXXXXXWEEVDPDELSYEELIALGEVVGTESRGLSADTIASLP 929
            D++  +   A             WE+VDPDELSYEEL+ALGEVVGTESRGLS DTIA LP
Sbjct: 212  DLSFSITEDAEDMEEHAANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTIACLP 271

Query: 930  SVTYKAQSNQDGSAEQCVICRXXXXXXXXXXXXXXEYEDEDTLTVLSCKHSYHSECINNW 1109
            SV YKA S+Q GS + CVICR              +YED+++LTVLSCKH YH ECINNW
Sbjct: 272  SVNYKAGSDQLGSNDSCVICR-------------VDYEDDESLTVLSCKHLYHPECINNW 318

Query: 1110 LQINKVCPVCSTEVSTS 1160
            L+INKVCPVCSTEVS S
Sbjct: 319  LKINKVCPVCSTEVSAS 335



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +2

Query: 233 SNRQTSRTPFTNLSQVDADMALARTLQEQERAYMMLRMNS 352
           + +Q SRTPFTNLSQVDAD+ALARTLQEQERAYMMLRMN+
Sbjct: 66  NTQQPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNN 105