BLASTX nr result

ID: Coptis25_contig00001541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001541
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279879.1| PREDICTED: cell number regulator 8-like [Vit...   243   5e-62
ref|XP_003521380.1| PREDICTED: cell number regulator 8-like [Gly...   240   6e-61
ref|XP_002525168.1| conserved hypothetical protein [Ricinus comm...   239   1e-60
ref|XP_003554365.1| PREDICTED: cell number regulator 8-like [Gly...   235   1e-59
gb|AFK42661.1| unknown [Lotus japonicus]                              235   2e-59

>ref|XP_002279879.1| PREDICTED: cell number regulator 8-like [Vitis vinifera]
          Length = 240

 Score =  243 bits (621), Expect = 5e-62
 Identities = 124/193 (64%), Positives = 141/193 (73%), Gaps = 2/193 (1%)
 Frame = -1

Query: 960 WTVDGLPIG-ASVVGEPVAPRRAQWNSGLFACLGRNDQFCSSDLEVCLLGSLAPCVLYGS 784
           WT DGLP+G  SVVGEP+   R QW+S LFACLGRND+FCSSDLEVCLLGS+APCVLYG 
Sbjct: 49  WTADGLPLGHGSVVGEPM--ERTQWDSSLFACLGRNDEFCSSDLEVCLLGSMAPCVLYGG 106

Query: 783 NAERLGSHSGTFANHCLPYTGLYLLGNFLFGWNCMAPLFSHPSRTVIRQKFNXXXXXXXX 604
           NAERLGS +G+FANHCLPYTGLYL+GN  FG+NC+AP FS+PSRT IR+KFN        
Sbjct: 107 NAERLGSGAGSFANHCLPYTGLYLIGNSFFGYNCLAPWFSYPSRTAIRRKFNLEGSCEAF 166

Query: 603 XXXXXXXXXGIMEDEVPREQCESAXXXXXXXXXXXXXXCQEGRELRRRLPHPGFNGR-VM 427
                     + EDE+ RE CE+A              CQEGRELRRRLPHPGFN + V+
Sbjct: 167 ARSCGCCGSFV-EDELQREHCETACDFATHVFCHACALCQEGRELRRRLPHPGFNAQPVL 225

Query: 426 VMIPPGEQMMGRS 388
           VMIPPGEQ MGRS
Sbjct: 226 VMIPPGEQTMGRS 238


>ref|XP_003521380.1| PREDICTED: cell number regulator 8-like [Glycine max]
          Length = 230

 Score =  240 bits (612), Expect = 6e-61
 Identities = 128/226 (56%), Positives = 149/226 (65%), Gaps = 9/226 (3%)
 Frame = -1

Query: 1035 NNQTAAPTKMVEEKEYKSNKCEEDQ-------WTVDGLPIG-ASVVGEPVAPRRAQWNSG 880
            NN+ A+P       + KS      +       WT DGLP+  ASVVG+P+   RA WNS 
Sbjct: 8    NNEEASPLLHQPHPQPKSEPPTPPETPEFLLGWTADGLPLAHASVVGQPMG--RAPWNSS 65

Query: 879  LFACLGRNDQFCSSDLEVCLLGSLAPCVLYGSNAERLGSHSGTFANHCLPYTGLYLLGNF 700
            + ACLG+ND FCSSDLEVCLLGS+APCVLYGSN ERLGS  GTFANHCLPY+G+Y++GN 
Sbjct: 66   ICACLGQNDHFCSSDLEVCLLGSVAPCVLYGSNVERLGSARGTFANHCLPYSGMYIIGNS 125

Query: 699  LFGWNCMAPLFSHPSRTVIRQKFNXXXXXXXXXXXXXXXXXGIMEDEVPREQCESAXXXX 520
             FGWNC+AP FS+PSRT IR++FN                  I+EDEV RE CESA    
Sbjct: 126  CFGWNCLAPWFSYPSRTAIRRRFN-LEGSCEALNRSCGCCGSILEDEVQREHCESACDLA 184

Query: 519  XXXXXXXXXXCQEGRELRRRLPHPGFNGR-VMVMIPPGEQMMGRSA 385
                      CQEGRELRRRLPHPGFN + V+VMIPPGEQ MGR A
Sbjct: 185  THVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQTMGREA 230


>ref|XP_002525168.1| conserved hypothetical protein [Ricinus communis]
            gi|223535465|gb|EEF37134.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 247

 Score =  239 bits (610), Expect = 1e-60
 Identities = 126/213 (59%), Positives = 146/213 (68%), Gaps = 2/213 (0%)
 Frame = -1

Query: 1023 AAPTKMVEEKEYKSNKCEEDQWTVDGLPIG-ASVVGEPVAPRRAQWNSGLFACLGRNDQF 847
            AA    VE+      +  E  WT +GLP+   SVVGEP+   RAQW+S + ACLGRND+F
Sbjct: 36   AAAESPVEKPAPPQLRRPEYGWTANGLPLSHGSVVGEPMG--RAQWDSSICACLGRNDEF 93

Query: 846  CSSDLEVCLLGSLAPCVLYGSNAERLGSHSGTFANHCLPYTGLYLLGNFLFGWNCMAPLF 667
            CSSDLEVCLLGS+APCVLYGSNAERLGS  GTFANHCLPYTGLYL+GN  FGWNC+AP F
Sbjct: 94   CSSDLEVCLLGSVAPCVLYGSNAERLGSTPGTFANHCLPYTGLYLIGNSFFGWNCIAPWF 153

Query: 666  SHPSRTVIRQKFNXXXXXXXXXXXXXXXXXGIMEDEVPREQCESAXXXXXXXXXXXXXXC 487
            S+PSRT IR++FN                  + EDE+ REQCESA              C
Sbjct: 154  SYPSRTAIRRRFNLEGSCEALNRSCGCCGSCV-EDELQREQCESACDFATHVFCHLCALC 212

Query: 486  QEGRELRRRLPHPGFNGR-VMVMIPPGEQMMGR 391
            QEGRE+RRR+PHPGFN + V+VMIPPGEQ M R
Sbjct: 213  QEGREIRRRVPHPGFNAQPVLVMIPPGEQAMAR 245


>ref|XP_003554365.1| PREDICTED: cell number regulator 8-like [Glycine max]
          Length = 228

 Score =  235 bits (600), Expect = 1e-59
 Identities = 120/194 (61%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
 Frame = -1

Query: 960 WTVDGLPIG-ASVVGEPVAPRRAQWNSGLFACLGRNDQFCSSDLEVCLLGSLAPCVLYGS 784
           WT DGLP+G  SVVG+P+   RA WNS + ACLG+ D FCSSDLEVCLLGS+APCVLYGS
Sbjct: 38  WTADGLPLGHGSVVGQPMG--RAPWNSSICACLGQTDHFCSSDLEVCLLGSVAPCVLYGS 95

Query: 783 NAERLGSHSGTFANHCLPYTGLYLLGNFLFGWNCMAPLFSHPSRTVIRQKFNXXXXXXXX 604
           N ERL S  GTFANHCLPY+G+Y++GN  FGWNC+AP FS+PSRT IR++FN        
Sbjct: 96  NVERLESAPGTFANHCLPYSGMYIIGNSCFGWNCLAPWFSYPSRTAIRRRFN-LEGSCEA 154

Query: 603 XXXXXXXXXGIMEDEVPREQCESAXXXXXXXXXXXXXXCQEGRELRRRLPHPGFNGR-VM 427
                     I+EDEV REQCES               CQEGRELRRRLPHPGFN + V+
Sbjct: 155 LNRSCGCCGSILEDEVQREQCESTCDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVL 214

Query: 426 VMIPPGEQMMGRSA 385
           VMIPPGEQ MGR A
Sbjct: 215 VMIPPGEQTMGREA 228


>gb|AFK42661.1| unknown [Lotus japonicus]
          Length = 234

 Score =  235 bits (599), Expect = 2e-59
 Identities = 119/194 (61%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
 Frame = -1

Query: 960 WTVDGLPIG-ASVVGEPVAPRRAQWNSGLFACLGRNDQFCSSDLEVCLLGSLAPCVLYGS 784
           WT DG P+   SVVG+P++  R+ WNS + ACLG+ND FCSSDLEVCLLGS+APCVLYGS
Sbjct: 44  WTADGHPVPHGSVVGQPMS--RSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGS 101

Query: 783 NAERLGSHSGTFANHCLPYTGLYLLGNFLFGWNCMAPLFSHPSRTVIRQKFNXXXXXXXX 604
           N ERLGS  GTF NHCLPY+GLY++GN  FGWNC+APLFS+PSRT +R++FN        
Sbjct: 102 NVERLGSTPGTFVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFN-LEGSCEA 160

Query: 603 XXXXXXXXXGIMEDEVPREQCESAXXXXXXXXXXXXXXCQEGRELRRRLPHPGFNGR-VM 427
                      MEDE  REQCESA              CQEGRELRRRLPHPGFN + V+
Sbjct: 161 LNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVL 220

Query: 426 VMIPPGEQMMGRSA 385
           VMIPPGEQ MGR+A
Sbjct: 221 VMIPPGEQTMGRAA 234


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