BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001533
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like...   289   7e-76
ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|2...   286   6e-75
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...   281   2e-73
gb|AFK35756.1| unknown [Lotus japonicus]                              280   4e-73
ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycin...   274   3e-71

>ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
           gi|297743767|emb|CBI36650.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  289 bits (740), Expect = 7e-76
 Identities = 145/246 (58%), Positives = 171/246 (69%)
 Frame = -3

Query: 980 MTVXXXXXXXXXXXGPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXWRAFLPIK 801
           MTV           GPS S+FVSVISKKPF                      WRAFLP+K
Sbjct: 1   MTVTAGIGYALIALGPSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLK 60

Query: 800 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 621
           TT+WWP+AI+II+S+ FQE LR+LFWKVYKRLEDILD FADRVSKPRLFLTDKMQI    
Sbjct: 61  TTAWWPYAILIITSIAFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAG 120

Query: 620 XXXXXXXXAIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 441
                   A+FFCLSLLTPAFG ATF+VD+CS++PFFL+SA+++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGGAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFN 180

Query: 440 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXLHCAKTAWTKLT 261
           GYA+G K DQ+FVPV+H+VA MVTL+N A GGC IG            +HC K  W +LT
Sbjct: 181 GYAEGNKVDQLFVPVVHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLT 240

Query: 260 EDRGRQ 243
           E + R+
Sbjct: 241 ETQSRE 246


>ref|XP_002309813.1| predicted protein [Populus trichocarpa] gi|222852716|gb|EEE90263.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  286 bits (732), Expect = 6e-75
 Identities = 147/243 (60%), Positives = 168/243 (69%)
 Frame = -3

Query: 980 MTVXXXXXXXXXXXGPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXWRAFLPIK 801
           MTV           GPSLS+F+SVISKKPF                      WRAFLP+K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60

Query: 800 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 621
           +T+WWPFAI+I++SV FQE LR+LFWKVYKRLEDILD FADR++KPRLFLTDKM I    
Sbjct: 61  STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120

Query: 620 XXXXXXXXAIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 441
                   A+FFCLSLLTPAFGPATF+VDKCSQ+PFFLVSAI++L FVTIHT SMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180

Query: 440 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXLHCAKTAWTKLT 261
           GYA+G K DQ FVP +HLVA MVTLVNFA GGC +G            LHC K  W +L+
Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240

Query: 260 EDR 252
           E R
Sbjct: 241 ETR 243


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/246 (58%), Positives = 167/246 (67%)
 Frame = -3

Query: 980 MTVXXXXXXXXXXXGPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXWRAFLPIK 801
           MTV           GPSLS+FVSVISKKPF                      WR FLP+K
Sbjct: 1   MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLK 60

Query: 800 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 621
           T +WWP+A++I++SV FQE LRLLFWK+YKRLEDILD FAD++SKPRLFLTDKM I    
Sbjct: 61  TKTWWPYALLIVTSVCFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAG 120

Query: 620 XXXXXXXXAIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 441
                   A+FFCLSLLTPAFGPATF++D CSQ+PFFLVSAI++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180

Query: 440 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXLHCAKTAWTKLT 261
           GYA+G K DQIFVPV+HLVA +VTL N A GGC +G            L C K  W +LT
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLT 240

Query: 260 EDRGRQ 243
           E+R  Q
Sbjct: 241 ENRSTQ 246


>gb|AFK35756.1| unknown [Lotus japonicus]
          Length = 249

 Score =  280 bits (716), Expect = 4e-73
 Identities = 138/242 (57%), Positives = 164/242 (67%)
 Frame = -3

Query: 980 MTVXXXXXXXXXXXGPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXWRAFLPIK 801
           MTV           GPSLSIF+SVISKKPF                      WR FLP+ 
Sbjct: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLS 60

Query: 800 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 621
           TT+WWP+AI+I+SS+ FQE LRL FWK+YKRLEDILD FADRVSKP LFLTDKM I    
Sbjct: 61  TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIALAG 120

Query: 620 XXXXXXXXAIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 441
                   A+FFC+SLLTPAFGPAT++VD+CSQ+PFFL+SA++ L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180

Query: 440 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXLHCAKTAWTKLT 261
           GYA+G K DQ FVP++H VA  VT+VN APGGC +G            +HC + AW +LT
Sbjct: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240

Query: 260 ED 255
           E+
Sbjct: 241 EN 242


>ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycine max]
           gi|255642888|gb|ACU22669.1| unknown [Glycine max]
          Length = 249

 Score =  274 bits (700), Expect = 3e-71
 Identities = 137/242 (56%), Positives = 163/242 (67%)
 Frame = -3

Query: 980 MTVXXXXXXXXXXXGPSLSIFVSVISKKPFXXXXXXXXXXXXXXXXXXXXXXWRAFLPIK 801
           MTV           GPSLSIFVSVISKKPF                      WR  LP+ 
Sbjct: 1   MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLN 60

Query: 800 TTSWWPFAIIIISSVVFQESLRLLFWKVYKRLEDILDGFADRVSKPRLFLTDKMQIXXXX 621
           TT+WWPF I+I SSV FQE+LRL  WK+YKRL+D+LD FADR+SKP L LTDKM I    
Sbjct: 61  TTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAG 120

Query: 620 XXXXXXXXAIFFCLSLLTPAFGPATFYVDKCSQMPFFLVSAIVSLGFVTIHTFSMVIAFN 441
                   A+FFC+SLLTPAFGPAT++VD+CS++PFFL+SAI++L FVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFN 180

Query: 440 GYADGKKTDQIFVPVIHLVAAMVTLVNFAPGGCAIGXXXXXXXXXXXXLHCAKTAWTKLT 261
           GY++G K DQ FVP++H+VA MVTLVN APGGCA+G            +HC +  W KLT
Sbjct: 181 GYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240

Query: 260 ED 255
           ED
Sbjct: 241 ED 242