BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001506
         (5848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240...  1244   0.0  
emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]  1222   0.0  
ref|XP_002311103.1| predicted protein [Populus trichocarpa] gi|2...  1022   0.0  
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc...   995   0.0  
ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc...   959   0.0  

>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
          Length = 1940

 Score = 1244 bits (3218), Expect = 0.0
 Identities = 822/1852 (44%), Positives = 1089/1852 (58%), Gaps = 65/1852 (3%)
 Frame = -2

Query: 5730 GAVADAVL-AFMPPEPLPWERKDVVVYRKHDRSDGGLIRSGVARWRDXXXXXXXXXXXXX 5554
            G  A A+   FMPPEPLPW+RKD    RKH+RS+        ARWRD             
Sbjct: 119  GGAAHAIYWVFMPPEPLPWDRKDFFKERKHERSES---LGFSARWRDSHQGS-------- 167

Query: 5553 XXXXSREFGHRWASDDFRRPQGHGKQGGQQLYSEDSAGYGCVPFRASDRMVGDENG--FR 5380
                 REF  RW S + RRP GHGKQGG  ++ E+S G+G VP R+SD+MV DEN   F 
Sbjct: 168  -----REFA-RWGSAEVRRPPGHGKQGGWHIFPEES-GHGFVPSRSSDKMVEDENSRPFT 220

Query: 5379 SR---NAKYVNRNTREVKGSFSYKETKGYLWESGDA--NASVRQHDLNIQRSVSDLLTYT 5215
            +R   N KY +RN RE++GSFS K+ KG+  E+G+A  N S R   +N QRSV D+L + 
Sbjct: 221  TRGDGNGKY-SRNNREIRGSFSQKDWKGHPLETGNASPNMSGRSLAINDQRSVDDMLIH- 278

Query: 5214 PHPQSDVVDNSSWDDLQLRDHQNDKLATVDALGTGHRYGKEQSLGPTGWKPLKWNXXXXX 5035
                SD V+   WD LQL+D Q+DK+ +V+ LGTG R  +E SL    WKPLKW      
Sbjct: 279  ----SDFVNG--WDQLQLKD-QHDKMGSVNGLGTGQRAERENSLSSIDWKPLKWTRSGSL 331

Query: 5034 XXXXXXXXXXXXXXXXGADSDETKPDLPSGRATPVHXXXXXXXXXXXXXXXGEDTCPRKK 4855
                            G DS+E + DL     TPV                 E+T  RKK
Sbjct: 332  SSRGSGFSHSSSSKSMGVDSNEARGDLQPRNVTPVQSPSGDAVACVASTAPSEETSSRKK 391

Query: 4854 QRLGWGQGLAKYEKQKVEGSDETFCKSGMVPCXXXXXXXXXXXS-LPDKSPRVLGPSECA 4678
             RLGWG+GLAKYE++KVEG DE+  K+G+V C           S L DKSPRV+G S+CA
Sbjct: 392  PRLGWGEGLAKYERKKVEGPDESVNKNGIVFCTSNGESTHSLNSNLADKSPRVMGFSDCA 451

Query: 4677 SPVTTSSVACSSSPGIDDKPHIKAANDDIDTCNLSVSPA----HGVQSCXXXXXXXXXXX 4510
            SP T SSVACSSSPG+++K   KA N D DT  LS SP     + +              
Sbjct: 452  SPATPSSVACSSSPGMEEKSFSKAGNVDNDTSTLSGSPGPVSLNHLDGFSFILESLEPNQ 511

Query: 4509 XSATSFNTLLNDLLQLEDASSGDSNFVKSTAMNKLLLMKSELSKALEKTECEIDLFENEL 4330
             +   F+ +  +LLQ +D SS DSNF++STAM+KLL+ K ++SK+LE TE EID  ENEL
Sbjct: 512  IANLGFSPI--ELLQSDDPSSVDSNFMRSTAMSKLLIWKGDISKSLEMTESEIDTLENEL 569

Query: 4329 KLLNSKVESKARYSVASDSR---------EHMGAVSNVFQKPVPLQLESSSCLNVDLPNS 4177
            K L S   S      AS S          E  GA SN+  +P PLQ+     +  D    
Sbjct: 570  KSLKSGSGSSCPCPAASSSFPVEGKAKPCEEQGAASNLILRPAPLQIVPPGDMMTDKTLL 629

Query: 4176 CNNALEEVHGEGKDDEIDSPGTATSKFVETLCM---ETPLQVYTMGRNDGRSIEDITARP 4006
             ++A+E+ H E KD++IDSPGTATSKFVE  C+    +P  +   G   G     IT R 
Sbjct: 630  GSDAMEDAHAEVKDEDIDSPGTATSKFVEPPCLVKTASPSDMVIQGECSGNL--KIT-RS 686

Query: 4005 VSSEQHCLLPSA-AEKLAVSGNGHEDQQV------GSICTDVLSQMSAECELNDVIFVSN 3847
             + E   L+     E+  +S +G + + +        +  D+      E ++ ++I  SN
Sbjct: 687  TNMEVELLVSGPNVEETGISTSGGDSRLLVESKTGARVSGDMGVLDDEEDKIYNLILASN 746

Query: 3846 RNCAAKSFEVFSKLLPTDNSEIDIWGSCSISCQKNNSLVKQRLAARKCFQRFKERVLTLK 3667
            ++CA ++ EVF+KLLP +  + DI G+ + +C++N+SL+KQ+ A RK F RFKE+V+TLK
Sbjct: 747  KDCANRASEVFNKLLPQNQCQNDILGAANFACRQNDSLIKQKFAMRKRFLRFKEKVITLK 806

Query: 3666 FRALHYLWKEDVRL---RKYKAKSQKRIESNSRTLHIVNQKHRSNIRSRFTSPAGSLTLV 3496
            FR   ++WKED+RL   RKY+AKSQK+ E + RT H   QKHRS+IRSRF+SPAG+L+ V
Sbjct: 807  FRVSQHVWKEDMRLLSIRKYRAKSQKKFELSLRTSHCGYQKHRSSIRSRFSSPAGNLSPV 866

Query: 3495 PTSEIVDFTSKLLSDSQVKLCRDNLKMPSL-LDVKEKRISRFVTSNGLVEDPFAAEKERM 3319
            PT+E++++TSK+LS+SQ+KLCR+ LKMP+L LD KEK  SRF++SNGLVEDP A E ER 
Sbjct: 867  PTAEMINYTSKMLSESQMKLCRNILKMPALILDKKEKTASRFISSNGLVEDPCAVENERT 926

Query: 3318 MINPWMPEEKEIFLEKLGTFGKDFKKIASYLDHKTTADCVEFYYKNHKSESFEAVKKKSE 3139
            MINPW  EEKEIF++KL  FGK+FKKIAS+LDHKTTADCVEFYYKNHKS+ FE  KKK E
Sbjct: 927  MINPWTAEEKEIFMDKLAIFGKEFKKIASFLDHKTTADCVEFYYKNHKSDCFEKTKKKLE 986

Query: 3138 LRKQEKGFPTSTYLMTSGKKWNREVNAASLDLLGEASVIAAHADCSLKSQHTYMSRAVLG 2959
            LRKQ K    +TYL+TSGKKWNRE+NAASLD+LG ASV+AA A  S+++  T   + +LG
Sbjct: 987  LRKQGKSLSATTYLVTSGKKWNREMNAASLDMLGAASVMAARAGDSMENLQTCPGKFLLG 1046

Query: 2958 GHYYHKTCWGDDASYEKSSSVDILGSEREAAAADTLAGICGALSSEAMSSCVTSSVDPGE 2779
             H+ ++T  GD+   E+SSS DI+ +ERE  AAD LAGICG+LSSEAMSSC+TSS+DPGE
Sbjct: 1047 AHHDYRTPHGDNGVVERSSSYDIIRNERETVAADVLAGICGSLSSEAMSSCITSSLDPGE 1106

Query: 2778 SCQEVKFQKNSVTDRPLTPKYMQTIDDEETCSDESCGELDSVDWTDEEKSNFIDALRSFG 2599
              +E++ +  S   RPLTP+  Q+I DEETCSDESCGE+D  DWTDEEK  F+ A+ S+G
Sbjct: 1107 GYRELRQKVGSGVKRPLTPEVTQSI-DEETCSDESCGEMDPADWTDEEKCIFVQAVSSYG 1165

Query: 2598 KDFVKISLCVRSRSRDQCKVFFSKARKSLGLDDFHLGGGSEGTPVS-DINGGRSDTEDAC 2422
            KDF KIS CVR+RSRDQCKVFFSKARK LGLD  H  G + GTP S D NGG SDTEDAC
Sbjct: 1166 KDFAKISRCVRTRSRDQCKVFFSKARKCLGLDLIH-PGPNVGTPESDDANGGGSDTEDAC 1224

Query: 2421 VLEMESAICSTQSCSKMEIDLQFYVMNTSCEVVEHAATNHLQLNESDRLGEKNGKELLNN 2242
            V+E  S ICS +S SKME D    V+N             +  +ESD  G KN +  LN 
Sbjct: 1225 VVEAGSVICSNKSGSKMEEDSLLSVLN-------------INPDESDFSGMKNLQTDLN- 1270

Query: 2241 LQIDKPEKSGENNDV--VLNRDDGVLDAEGLILNKCEPADKSELVLCGRDSSVKVSESLD 2068
                   +S ENN +  V ++DD  +    L+ +KC   +K+E V          S SL+
Sbjct: 1271 -------RSYENNGIGRVDHKDDETV--TNLVSDKCHQLEKTEQVFGD-------SNSLN 1314

Query: 2067 GSPEIMRPDSFLGKDSSLSCEVHQHAAFTH---STDAVKQHRTTTPTNESLCAEMPGGVT 1897
            G               SL+  V ++   T      ++V     T P++ S          
Sbjct: 1315 GI-----------DSKSLTLHVEKNGPCTKMEMDHESVSAVEATDPSDRSNAV------- 1356

Query: 1896 RTMSVDAIEHKAISRSSADGLNVESGLEQGSVDGSQNVKTGLETNTSSSSGCFSQDTNI- 1720
                           S A+ L   + L + S++  +      +T+   S  C  +D+ + 
Sbjct: 1357 ---------------SQAEDLTEGNLLPETSLNVRREENNDADTSGQMSLKCTVKDSEVK 1401

Query: 1719 ----YRHPSNLASERSISQSFSPIQNQHQNPLELLHSVQKAHGASWKQKEDSPASANSVL 1552
                ++ P++ +  R I  S      Q Q  +EL    QK    S  Q+    A  +   
Sbjct: 1402 ENALHQVPNSTSCPRFIFNSGC----QDQVSVEL--DNQKPGVISLLQESSLMAEDSVPK 1455

Query: 1551 PGSVIHFEDHLRQGSSSSTLNFDGSRNEQHQKLVSAEVYQRYLSNNSL--NRIDS--LQI 1384
              SVI +E  L QG S STL+   ++++   K +  + Y ++LS +SL  N +++   Q 
Sbjct: 1456 DSSVIQYEKTLDQGMSPSTLDLKETKDK--NKSIGVDEYHQHLSGHSLLNNAVNAELSQK 1513

Query: 1383 LRGYPLQVLNKKDVNGHVDSGSEENHSVIHNSLTSGNHQSGKFIGQD---KKCKGSELPH 1213
            + G PLQ   K+D+N  + S    + +    S    + QS   + QD   +KC GS+  H
Sbjct: 1514 VGGCPLQTPPKEDMNRDL-SCKNPSSAAERLSKLDRDIQSSHSLAQDCYLQKCNGSK-SH 1571

Query: 1212 SL-AELSLLSKNHEKLPSGHTRSRSQGSADTDEHSCRNGNVKLFGQILSHHPSTSQKTNV 1036
            SL  EL  LS++ E+  S  TR+  +  +DT++ S RNG+ KLFGQILSH PS     + 
Sbjct: 1572 SLGTELPFLSQSLER-TSNQTRAHGRSLSDTEKTS-RNGDFKLFGQILSHPPSLQNPNSC 1629

Query: 1035 ILQETDNTAAVPQSSSNVFELKVPDHG-TDRPLTASMFDGNRHSCDDFPARSYGFWDGSR 859
              +  D  A  P+ SS    LK   H   D  L AS  D N +   +    SYGFWDG+R
Sbjct: 1630 SNENDDKGAHNPKLSSKSVNLKFTGHHCIDGNLGASKVDRNNYLGLENLPMSYGFWDGNR 1689

Query: 858  TQTGLTSLPDSSILLTKYPPAFSEYSTASSCG-DQQSLPAIITRNDRNLGSISVCPVKDV 682
             QTG +SLPDS++LL KYP AFS Y  +SS   +QQSL  ++  N+RNL  ISV P +D+
Sbjct: 1690 IQTGFSSLPDSTLLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNERNLNGISVFPTRDM 1749

Query: 681  RGNGNLPDY-QGSRSYDGAKVQPFTVDVK-RHDTFSELQKRKGIE-MSSFQKQAR-VVGM 514
              +  + DY Q  R  D  K+QPFTVD+K R D FSE+Q+R G E +SS Q   R +VGM
Sbjct: 1750 SSSNGVADYHQVFRGRDCTKLQPFTVDMKQRQDLFSEMQRRNGFEAVSSLQAPGRGMVGM 1809

Query: 513  NVMGT-GILVGGSCT-GVSDPVAAIKMHYA-TTERYGGHNGS-IREEDSWRE 370
            NV+G  GILVGG+CT  VSDPVAAIKMHYA TT+++GG  GS IR+++SWRE
Sbjct: 1810 NVVGRGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDESWRE 1861


>emb|CAN62996.1| hypothetical protein VITISV_026902 [Vitis vinifera]
          Length = 1971

 Score = 1222 bits (3161), Expect = 0.0
 Identities = 818/1882 (43%), Positives = 1084/1882 (57%), Gaps = 83/1882 (4%)
 Frame = -2

Query: 5700 MPPEPLPWERKDVVVYRKHDRSDGGLIRSGVARWRDXXXXXXXXXXXXXXXXXSREFGHR 5521
            MPPEPLPW+RKD    RKH+RS+        ARWRD                  REF  R
Sbjct: 1    MPPEPLPWDRKDFFKERKHERSES---LGFSARWRDSHQGS-------------REFA-R 43

Query: 5520 WASDDFRRPQGHGKQGGQQLYSEDSAGYGCVPFRASDRMVGDENG--FRSR---NAKYVN 5356
            W S   RRP GHGKQGG  ++ E+S G+G VP R+SD+MV DEN   F  R   N KY +
Sbjct: 44   WGSAXVRRPPGHGKQGGWHIFPEES-GHGFVPSRSSDKMVEDENSRPFTXRGDGNGKY-S 101

Query: 5355 RNTREVKGSFSYKETKGYLWESGDA--NASVRQHDLNIQRSVSDLLTYTPHPQSDVVDNS 5182
            RN RE++GSFS K+ KG+  E+G+A  N S R   +N QRSV D+L +     SD V+  
Sbjct: 102  RNNREIRGSFSQKDWKGHPLETGNASPNMSGRSLAINDQRSVDDMLIH-----SDFVNG- 155

Query: 5181 SWDDLQLRDHQNDKLATVDALGTGHRYGKEQSLGPTGWKPLKWNXXXXXXXXXXXXXXXX 5002
             WD LQL+D Q+DK+ +V+ LGTG R  +E SL    WKPLKW                 
Sbjct: 156  -WDQLQLKD-QHDKMGSVNGLGTGQRAERENSLSSIDWKPLKWTRSGSLSSRGSGFSHSS 213

Query: 5001 XXXXXGADSDETKPDLPSGRATPVHXXXXXXXXXXXXXXXGEDTCPRKKQRLGWGQGLAK 4822
                 G DS+E + DL     TPV                 E+T  RKK RLGWG+GLAK
Sbjct: 214  SSKSMGVDSNEARGDLQXRNVTPVQSPSGDAVACVASTAPSEETSSRKKPRLGWGEGLAK 273

Query: 4821 YEKQKVEGSDETFCKSGMVPCXXXXXXXXXXXS-LPDKSPRVLGPSECASPVTTSSVACS 4645
            YE++KVEG DE+  K+G+V C           S L DKSPRV+G S+CASP T SSVACS
Sbjct: 274  YERKKVEGPDESVNKNGIVFCTSNGESTHSLNSNLADKSPRVMGFSDCASPATPSSVACS 333

Query: 4644 SSPGIDDKPHIKAANDDIDTCNLSVSPA----HGVQSCXXXXXXXXXXXXSATSFNTLLN 4477
            SSPG++DK   KA N D DT  LS SP     + +               +   F+ +  
Sbjct: 334  SSPGMEDKSFSKAGNVDNDTSTLSGSPGPVSLNHLDGFSFILESLEPNQIANLGFSPI-- 391

Query: 4476 DLLQLEDASSGDSNFVKSTAMNKLLLMKSELSKALEKTECEIDLFENELKLLNSKVESKA 4297
            +LLQ +D SS DSNF++STAM+KLL+ K ++SK+LE TE EID  ENELK L S   S  
Sbjct: 392  ELLQSDDPSSVDSNFMRSTAMSKLLIWKGDISKSLEMTESEIDTLENELKSLKSGSGSSC 451

Query: 4296 RYSVASDSR---------EHMGAVSNVFQKPVPLQLESSSCLNVDLPNSCNNALEEVHGE 4144
                AS S          E  GA SN+  +P PLQ+     +  D     ++A+E+ H E
Sbjct: 452  PCPAASSSFPVEGKAKPCEEQGAASNLILRPAPLQIVPPGDMMTDKTLLGSDAMEDAHAE 511

Query: 4143 GKDDEIDSPGTATSKFVETLCM---ETPLQVYTMGRNDGRSIEDITARPVSSEQHCLLPS 3973
             KD++IDSPGTATSKFVE  C+    +P  +   G   G     IT R  + E   L+  
Sbjct: 512  VKDEDIDSPGTATSKFVEPPCLVKTASPSDMVIQGECSGNL--KIT-RSTNMEVELLVSG 568

Query: 3972 A-AEKLAVSGNGHEDQQV------GSICTDVLSQMSAECELNDVIFVSNRNCAAKSFEVF 3814
               E+  +S +G + + +        +  D+      E ++ ++I  SN++CA ++ EVF
Sbjct: 569  PNVEETGISTSGGDSRLLVESKTGARVSGDMGVLDDEEDKIYNLILASNKDCANRASEVF 628

Query: 3813 SKLLPTDNSEIDIWGSCSISCQKNNSLVKQRLAARKCFQRFKERVLTLKFRALHYLWKED 3634
            +KLLP +  + DI G+ + +C++N+SL+KQ+ A RK F RFKE+V+TLKFR   ++WKED
Sbjct: 629  NKLLPQNQCQNDILGAANFACRQNDSLIKQKFAMRKRFLRFKEKVITLKFRVSQHVWKED 688

Query: 3633 VRL---RKYKAKSQKRIESNSRTLHIVNQKHRSNIRSRFTSPA----------------- 3514
            +RL   RKY+AKSQK+ E + RT H   QKHRS+IRSRF+SP                  
Sbjct: 689  MRLLSIRKYRAKSQKKFELSLRTSHCGYQKHRSSIRSRFSSPGADFFLNLVLALFFEKLA 748

Query: 3513 ---GSLTLVPTSEIVDFTSKLLSDSQVKLCRDNLKMPSL-LDVKEKRISRFVTSNGLVED 3346
               G+L+ VPT+E++++TSK+LS+SQ+KLCR+ LKMP+L LD KEK  SRF++SNGLVED
Sbjct: 749  VQPGNLSPVPTAEMINYTSKMLSESQMKLCRNILKMPALILDKKEKTASRFISSNGLVED 808

Query: 3345 PFAAEKERMMINPWMPEEKEIFLEKLGTFGKDFKKIASYLDHKTTADCVEFYYKNHKSES 3166
            P A E ER MINPW  EEKEIF++KL  FGK+FKKIAS+LDHKTTADCVEFYYKNHKS+ 
Sbjct: 809  PCAVENERTMINPWTAEEKEIFMDKLAIFGKEFKKIASFLDHKTTADCVEFYYKNHKSDC 868

Query: 3165 FEAVKKKSELRKQEKGFPTSTYLMTSGKKWNREVNAASLDLLGEASVIAAHADCSLKSQH 2986
            FE  KKK ELRKQ K    +TYL+TSGKKWNRE+NAASLD+LG ASV+AA A  S+++  
Sbjct: 869  FEKTKKKLELRKQGKSLSATTYLVTSGKKWNREMNAASLDMLGAASVMAARAGDSMENLQ 928

Query: 2985 TYMSRAVLGGHYYHKTCWGDDASYEKSSSVDILGSEREAAAADTLAGICGALSSEAMSSC 2806
            T   + +LG H+ ++T  GD+   E+SSS DI+ +ERE  AAD LAGICG+LSSEAMSSC
Sbjct: 929  TCPGKFLLGAHHDYRTPHGDNGVVERSSSYDIIRNERETVAADVLAGICGSLSSEAMSSC 988

Query: 2805 VTSSVDPGESCQEVKFQKNSVTDRPLTPKYMQTIDDEETCSDESCGELDSVDWTDEEKSN 2626
            +TSS+DPGE  +E++ +  S   RPLTP+  Q+I  EETCSDESCGE+D  DWTDEEK  
Sbjct: 989  ITSSLDPGEGYRELRQKVGSGVKRPLTPEVTQSI-AEETCSDESCGEMDPADWTDEEKCI 1047

Query: 2625 FIDALRSFGKDFVKISLCVRSRSRDQCKVFFSKARKSLGLDDFHLGGGSEGTPVS-DING 2449
            F+ A+ S+GKDF KIS CVR+RSRDQCKVFFSKARK LGLD  H  G + GTP S D NG
Sbjct: 1048 FVQAVSSYGKDFAKISRCVRTRSRDQCKVFFSKARKCLGLDLIH-PGPNVGTPESDDANG 1106

Query: 2448 GRSDTEDACVLEMESAICSTQSCSKMEIDLQFYVMNTSCEVVEHAATNHLQLNESDRLGE 2269
            G SDTEDACV+E  S ICS +S SKME D    V+N             +  +ESD  G 
Sbjct: 1107 GGSDTEDACVVEAGSVICSNKSGSKMEEDSLLSVLN-------------INPDESDFSGM 1153

Query: 2268 KNGKELLNNLQIDKPEKSGENNDV--VLNRDDGVLDAEGLILNKCEPADKSELVLCGRDS 2095
            KN +  LN        +S ENN +  V ++DD  +    L+ +KC   +K+E V      
Sbjct: 1154 KNLQTDLN--------RSYENNGIGRVDHKDDETV--TNLVSDKCHQLEKTEQVFGD--- 1200

Query: 2094 SVKVSESLDGSPEIMRPDSFLGKDSSLSCEVHQHAAFTH---STDAVKQHRTTTPTNESL 1924
                S SL+G               SL+  V ++   T      ++V     T P++ S 
Sbjct: 1201 ----SNSLNGI-----------DSKSLTLHVEKNGPCTKMEMDHESVSAVEATDPSDRSN 1245

Query: 1923 CAEMPGGVTRTMSVDAIEHKAISRSSADGLNVESGLEQGSVDGSQNVKTGLETNTSSSSG 1744
                      + + D  E   +  +S +    E+        G  ++K  ++ ++     
Sbjct: 1246 AV--------SQAEDXTEGNLLPETSLNVRREEN--XDADTSGQMSLKCTVK-DSEVKEN 1294

Query: 1743 CFSQDTNIYRHPSNLASERSISQSFSPIQNQHQNPLELLHSVQKAHGASWKQKEDSPASA 1564
               Q  N    P  + +     Q    + NQ    + LL              ++S   A
Sbjct: 1295 ALHQVXNSTSCPRFIFNSGCQDQVSVELDNQKPGVISLL--------------QESSLMA 1340

Query: 1563 NSVLP--GSVIHFEDHLRQGSSSSTLNFDGSRNEQHQKLVSAEVYQRYLSNNSL--NRID 1396
               +P   SVI +E  L QG S STL+   ++++   K +  + Y ++LS +SL  N ++
Sbjct: 1341 EDSVPKDSSVIQYEKTLDQGMSPSTLDLKETKDK--NKSIGVDEYHQHLSGHSLLNNAVN 1398

Query: 1395 S--LQILRGYPLQVLNKKDVNGHVDSGSEENHSVIHNSLTSGNHQSGKFIGQD---KKCK 1231
            +   Q + G PLQ   K+D+N  + S    + +    S    + QS   + QD   +KC 
Sbjct: 1399 AELSQKVGGCPLQTPPKEDMNRDL-SCKNPSSAAERLSKLDRDIQSSHSLAQDCYLQKCN 1457

Query: 1230 GSELPHSL-AELSLLSKNHEKLPSGHTRSRSQGSADTDEHSCRNGNVKLFGQILSHHPST 1054
            GS+  HSL  EL  LS++ E+  S  TR+  +  +DT++ S RNG+ KLFGQILSH PS 
Sbjct: 1458 GSK-SHSLGTELPFLSQSLER-TSNQTRAHGRSLSDTEKTS-RNGDFKLFGQILSHPPSL 1514

Query: 1053 SQKTNVILQETDNTAAVPQSSSNVFELKVPDHG-TDRPLTASMFDGNRHSCDDFPARSYG 877
                +   +  D  A  P+ SS    LK   H   D  L AS  D N +   +    SYG
Sbjct: 1515 QNPNSCSNENDDKGAHNPKLSSKSVNLKFTGHHCIDGNLGASKVDRNNYLGLENLPMSYG 1574

Query: 876  FWDGSRTQTGLTSLPDSSILLTKYPPAFSEYSTASSCG-DQQSLPAIITRNDRNLGSISV 700
            FWDG+R QTG +SLPDS++LL KYP AFS Y  +SS   +QQSL  ++  N+RNL  ISV
Sbjct: 1575 FWDGNRIQTGFSSLPDSTLLLAKYPAAFSNYPMSSSTKIEQQSLQTVVKSNERNLNGISV 1634

Query: 699  CPVKDVRGNGNLPDY-QGSRSYDGAKVQPFTVDVK-RHDTFSELQKRKGIE-MSSFQKQA 529
             P +D+  +  + DY Q  R  D  K+QPFTVD+K R D FSE+Q+R G E +SS Q   
Sbjct: 1635 FPTRDMSSSNGVADYHQVFRGRDCTKLQPFTVDMKQRQDLFSEMQRRNGFEAVSSLQAPG 1694

Query: 528  R-VVGMNVMGT-GILVGGSCT-GVSDPVAAIKMHYA-TTERYGGHNGS-IREEDSWR--E 370
            R +VGMNV+G  GILVGG+CT  VSDPVAAIKMHYA TT+++GG  GS IR+++SWR   
Sbjct: 1695 RGMVGMNVVGRGGILVGGACTPSVSDPVAAIKMHYAKTTDQFGGQGGSIIRDDESWRGNG 1754

Query: 369  DMGR*FVRW*LNGYLVAVCAEL 304
            D+G  FV    +G    +C  L
Sbjct: 1755 DIGSSFVFVVFDGNTEIICGNL 1776


>ref|XP_002311103.1| predicted protein [Populus trichocarpa] gi|222850923|gb|EEE88470.1|
            predicted protein [Populus trichocarpa]
          Length = 1666

 Score = 1022 bits (2643), Expect = 0.0
 Identities = 707/1742 (40%), Positives = 961/1742 (55%), Gaps = 51/1742 (2%)
 Frame = -2

Query: 5700 MPPEPLPWERKDVVVYRKHDRSDGGLIRSG---VARWRDXXXXXXXXXXXXXXXXXSREF 5530
            MPPEPLPW+RKD    RKH+RS+      G    +RW+D                  R+F
Sbjct: 1    MPPEPLPWDRKDFFKERKHERSETTSSSFGGGSTSRWKDFSYSSSSHYGSS------RDF 54

Query: 5529 GHRWASDDFRRPQGHGKQGGQQLYSEDSAGYGCVPFRASDRMVGDEN--GFRSRNAKYVN 5356
             +RW   DFRRP GHGKQGG  + +E+S G+   P+R+SD+M+ DEN   F   + +YV 
Sbjct: 55   -NRWGPHDFRRPPGHGKQGGWHMLAEES-GHLYAPYRSSDKMLEDENCRPFLRGDGRYVR 112

Query: 5355 RNTREVKGSFSYKETKG-YLWE--SGDANASVRQHDL-NIQRSVSDLLTYTPHP--QSDV 5194
             N    +G FS ++ +G + WE  +G +N  VRQHD+ N   SV ++L + P     SD 
Sbjct: 113  NN----RGYFSQRDWRGGHSWEMSNGSSNMPVRQHDVSNDHMSVDEMLMFPPSQPAHSDF 168

Query: 5193 VDNSSWDDLQLRDHQ-NDKLATVDALGTGHRYGKEQSLGPTGWKPLKWNXXXXXXXXXXX 5017
            VD  SWD  QL+D Q N+K+  V+ LGTG R  +E SL    WKPLKW            
Sbjct: 169  VD--SWDQHQLKDQQDNNKMGGVNGLGTGQRGDRENSLD---WKPLKWTRSGSLSSRGSG 223

Query: 5016 XXXXXXXXXXG-ADSDETKPDLPSGRATPVHXXXXXXXXXXXXXXXGEDTCPRKKQRLGW 4840
                      G ADS+E K +L    ATPVH                E+   RKK RLGW
Sbjct: 224  LSHSSSSKSLGGADSNEGKAELQPKNATPVHSLSGDVAACVTSAALSEEISSRKKARLGW 283

Query: 4839 GQGLAKYEKQKVEGSDETFCKSG-MVPCXXXXXXXXXXXSLPDKSPRVLGPSECASPVTT 4663
            G+GLAKYEK+KVEG + +  K G +V             +L +KS  V+G S+CASP T 
Sbjct: 284  GEGLAKYEKKKVEGPETSDNKDGAVVSANNVESIHYQTSNLAEKSHGVMGFSDCASPATP 343

Query: 4662 SSVACSSSPGIDDKPHIKAANDDIDTCNLSVSPAHGVQSCXXXXXXXXXXXXSATSFN-- 4489
            SSVACSSSPG+++K  +K+ N D    N   SP+ G QS              ++  N  
Sbjct: 344  SSVACSSSPGLEEKTFVKSTNADNVVSNSCGSPSVGSQSQIEGLCFNLEKMDVSSVANLG 403

Query: 4488 TLLNDLLQLEDASSGDSNFVKSTAMNKLLLMKSELSKALEKTECEIDLFENELKLLNSKV 4309
            + L++LLQ +D SS DS+FV+STAMNKLL  K ++SK+LE TE EID  ENELK +  + 
Sbjct: 404  SSLSELLQSDDPSSVDSSFVRSTAMNKLLAWKGDISKSLELTESEIDSLENELKSMRFES 463

Query: 4308 ESKARYSVASDSREH---------MGAVSNVFQKPVPLQLESSSCLNVDLPNSCNNALEE 4156
             ++     AS  R            G  SN   +P PLQ+ S     V+  + CN  LEE
Sbjct: 464  GNRCPCPAASSPRPFDSDAKPCNVQGVASNSVPRPSPLQVASCGDGIVEKVSFCNGELEE 523

Query: 4155 VHGEGKDDEIDSPGTATSKFVETLCMETPLQVYTMGRNDGRSIEDITARPVSSEQHCLLP 3976
             H + K+D+IDSPGTATSK VE + +          ++D  +I+             ++P
Sbjct: 524  AHADVKEDDIDSPGTATSKLVEPVFLARADSSTVTVKDDFDAIQSARMNLKG-----VVP 578

Query: 3975 SAAEKLAVSGNGHEDQQVGSICTDVLSQMSAECELNDVIFVSNRNCAAKSFEVFSKLLPT 3796
             A E++       ED   G    DV+S    E  L ++I  SN+  A+++ EVF+KLLP+
Sbjct: 579  CADEEVTGIFTCKEDLPSG----DVISDTYGEDNLCNLILASNKQSASRASEVFNKLLPS 634

Query: 3795 DNSEIDIWGSCSISCQKNNSLVKQRLAARKCFQRFKERVLTLKFRALHYLWKEDVRL--- 3625
            +    D  G  + S  ++++LV +  A RK   RFKER +TLKF+A H+LWKED+RL   
Sbjct: 635  EQCRFDFSGVINGSSWQSDALVVENFAMRKRLLRFKERAVTLKFKAFHHLWKEDMRLLSI 694

Query: 3624 RKYKAKSQKRIESNSRTLHIVNQKHRSNIRSRFTSPAGSLTLVPTSEIVDFTSKLLSDSQ 3445
            RK++AKS K+ E + RT     QKHRS+IR+RF+SPAG+L LVPT+EI++FTSKLL+DSQ
Sbjct: 695  RKHRAKSHKKCEQSLRTTQSGFQKHRSSIRARFSSPAGNLNLVPTTEILNFTSKLLADSQ 754

Query: 3444 VKLCRDNLKMPSL-LDVKEKRISRFVTSNGLVEDPFAAEKERMMINPWMPEEKEIFLEKL 3268
            +KL R+ LKMP+L LD KEK +SRF++SNGLVEDP A EKER MINPW  +EKEIF+ KL
Sbjct: 755  LKLYRNALKMPALILDKKEKIVSRFISSNGLVEDPCAVEKERAMINPWTSDEKEIFMHKL 814

Query: 3267 GTFGKDFKKIASYLDHKTTADCVEFYYKNHKSESFEAVKKKSELRKQEKGFPTSTYLMTS 3088
             TFGKDF+KIA++LDHK+TADCVEFYYKNHKS+ FE  KK  + +       ++ YL+ S
Sbjct: 815  ATFGKDFRKIAAFLDHKSTADCVEFYYKNHKSDCFEKTKKSKQTKS------STNYLVAS 868

Query: 3087 GKKWNREVNAASLDLLGEASVIAAHADCSLKSQHTYMSRAVLGGHYYHKTCWG-DDASYE 2911
              KWNRE+NAASLD+ G  +V+AA AD ++ S+    SR    G+   K   G DD   E
Sbjct: 869  STKWNRELNAASLDIFG--AVMAAGADHAMNSRRLCSSRIFSSGYRNSKITEGCDDGILE 926

Query: 2910 KSSSVDILGSEREAAAADTLAGICGALSSEAMSSCVTSSVDPGESCQEVKFQK-NSVTDR 2734
             SS +D+LGSERE  AAD LAGICG++SSEAMSSC+T+SVD  E  +E K QK +SV   
Sbjct: 927  GSSILDVLGSERETVAADVLAGICGSMSSEAMSSCITTSVDLVEGYRERKCQKVDSVAKP 986

Query: 2733 PLTPKYMQTIDDEETCSDESCGELDSVDWTDEEKSNFIDALRSFGKDFVKISLCVRSRSR 2554
            PLT    +  D EETCSDESC E+D  DWTDEEKS FI A+ S+GKDF  IS  VR+R+R
Sbjct: 987  PLTSDVTRNFD-EETCSDESCEEMDPTDWTDEEKSMFIQAVSSYGKDFAMISHFVRTRTR 1045

Query: 2553 DQCKVFFSKARKSLGLDDFHLGGGSEGTPVSDI-NGGRSDTEDACVLEMESAICSTQSCS 2377
            DQCKVFFSKARK LGLD  H G  + GTPVSD+ NGG SDTEDAC +E  SAI S +  S
Sbjct: 1046 DQCKVFFSKARKCLGLDLMHPGHRNFGTPVSDVGNGGGSDTEDACAIETGSAISSDKLDS 1105

Query: 2376 KMEIDLQFYVMNTSCEVVE-------HAATNHLQLNESDRLGEKNGKELLNNLQIDKPEK 2218
            K++ DL   VMNT     +       H+  +  + N +  + + N  ++++ + +  P +
Sbjct: 1106 KIDEDLPPSVMNTEHNESDAEERIRLHSDLDGTEDNNASGILDHNDSKIVDKM-VSDPAE 1164

Query: 2217 SGENNDVVLNRDDGVLDAEGLILNKCEPADKSELVLCGRDSSVKVSESLDGSPEIMRPDS 2038
            +G+  D+ L  D  VL++    +N+ E     ++++   ++  +  ++ D +  +     
Sbjct: 1165 AGKRADLALVVDSKVLNS----VNQLESLQAQKVLIVSINAESERDQAADKTVSVAEAGP 1220

Query: 2037 FLGKDSSLSCEVHQHAAFTHSTDAVKQHRTTTPTNESLCAEMPGGVTRTMSVDAIEHKAI 1858
             +G                 + DA   +  T                      A+E KA+
Sbjct: 1221 VVG-----------------TVDASTSNANT----------------------AVELKAV 1241

Query: 1857 SRSSADGLNVESGLEQGSVDGSQNVKTGLETNTSSSSGCFSQDT-NIYRHPSNLASERSI 1681
            +  S D    E  L + S+               SSSG     T N   H  N+ S   I
Sbjct: 1242 AEVSNDVTGQELLLPEKSL--------------CSSSGLMQDSTSNASHHRVNMDSCSDI 1287

Query: 1680 SQSFSPIQNQHQNPLELLHSVQKAHGASWKQKEDSPASANSVLPGSVIHFEDHLRQGSSS 1501
            S+     +N HQ  +  L SV+K    S  Q+ D     + V    VI +E    Q    
Sbjct: 1288 SRC---SENIHQVSVH-LESVEKPPVISLPQENDLSIMNSVVQDSVVIQYEKKHEQ---- 1339

Query: 1500 STLNFDGSRNEQHQKLVSAEVYQRYLSNNSL-NRIDSLQILRGYPLQVLNKKDVNGHVDS 1324
                    R+EQ +     + Y ++LS + L ++ DS QILRGYPLQ+  KK++NG   +
Sbjct: 1340 ----LQECRDEQGKTSFCRDDYFQHLSGHPLMSQNDSSQILRGYPLQIPTKKEMNGDNYA 1395

Query: 1323 GSEENHSVIHNS---LTSGNHQSGKFIGQD---KKCKGSELPHSLAELSLLSKNHEKLPS 1162
                      NS   +TS  + + +F  +D   +KC GS+  HS++EL  LS+  E   S
Sbjct: 1396 RPLSEARSFPNSEKNVTSEKNVTSQFEAEDCYLQKCSGSKSQHSVSELPFLSQRFEH-GS 1454

Query: 1161 GHTRSRSQGSADTDEHSCRNGNVKLFGQILSHHPSTSQKTNVILQETDNTAA---VPQSS 991
               R  S+ S+D  E  CRNG+VKLFG+ILS   +  QK N I  E     A    P   
Sbjct: 1455 DCPRDHSRRSSDM-EKPCRNGDVKLFGKILS---NPLQKQNSIAHENGEKEAPHLKPAGK 1510

Query: 990  SNVFELKVPDHGTDRPLTASMFD-GNRHSCDDFPARSYGFWDGSRTQTGLTSLPDSSILL 814
            S  F+L    H T+  +     D  N+   ++FP  S+GFWD +RTQTG   LPDS+ LL
Sbjct: 1511 SATFKL-TGHHPTEGNMAFLKCDRNNQLGPENFPL-SHGFWDENRTQTG---LPDSAALL 1565

Query: 813  TKYPPAFSEYSTASSCGDQQSLPAIITRNDRNLGSISVCPVKDVRGNGNLPDYQGSRSYD 634
             KYP AFS Y   SS   QQ+L +++  N+ N   +SV P +DV G   + DYQ  R Y+
Sbjct: 1566 AKYPAAFSNYPVPSSKMPQQTLQSVVKSNECNQSGLSVFPSRDVSGTNGVVDYQLYRRYE 1625

Query: 633  GA 628
             A
Sbjct: 1626 AA 1627


>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1682

 Score =  995 bits (2572), Expect = 0.0
 Identities = 728/1844 (39%), Positives = 992/1844 (53%), Gaps = 63/1844 (3%)
 Frame = -2

Query: 5700 MPPEPLPWERKDVVVYRKHDRSDGGLIRSGVARWRDXXXXXXXXXXXXXXXXXSREFGHR 5521
            MPPEPLPW+RKD    RKHDRS+       VARWRD                  R+F +R
Sbjct: 1    MPPEPLPWDRKDFFKERKHDRSEAV---GSVARWRDSSHH--------------RDF-NR 42

Query: 5520 WASDDFR-RPQGHGKQGGQQLYSEDSAGYGCVPFRASDRMVGDENG--FRSRNAKYVNRN 5350
            W S +FR RP GHGKQGG  ++SE+  G+G    R+ D+M+ +E+G    SR      R+
Sbjct: 43   WGSAEFRSRPPGHGKQGGWHMFSEEP-GHGYGVSRSGDKML-EEDGRPLVSRGDGKYGRS 100

Query: 5349 TREVKGS-FSYKETKGYLWES--GDANASVRQHDLNI-QRSVSDLLTYTPHPQSDVVDNS 5182
            +R+ +G  F  ++ +G+ WE+  G  N S R  D+N  QRSV D  TY+ HP SD V+  
Sbjct: 101  SRDNRGGPFGQRDWRGHSWEASNGSPNLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVN-- 158

Query: 5181 SWDDLQLRDHQNDKLATVDALGTGHRYGKEQSLGPTGWKPLKWNXXXXXXXXXXXXXXXX 5002
            +W+   L+D Q+ K   V+ LGTG R  +E SL    WKPLKW                 
Sbjct: 159  TWEQHNLKD-QHAKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTRSGSLSSRGSGFSHSS 217

Query: 5001 XXXXXGA-DSDETKPDLPSGRATPVHXXXXXXXXXXXXXXXGEDTCPRKKQRLGWGQGLA 4825
                    DS E KP+L     T V                 ED   RKK RL WG+GLA
Sbjct: 218  SSRSMAGTDSYEGKPNLKHKNVTAVESNSGEATACVTSSMPSEDATSRKKPRLNWGEGLA 277

Query: 4824 KYEKQKVEGSDETFCKSGMVP-CXXXXXXXXXXXSLPDKSPRVLGPSECASPVTTSSVAC 4648
            KYEK+KV+  D    K G V              +L DKSP+V G S+CASP T SSVAC
Sbjct: 278  KYEKKKVDVPDPGSNKDGSVSSAGNMEPCSSISPNLVDKSPKVTGFSDCASPATPSSVAC 337

Query: 4647 SSSPGIDDKPHIKAANDDIDTCNLSVSPAHGVQSCXXXXXXXXXXXXSATSFNTL---LN 4477
            SSSPG+DDK   K  N D D  NL+ SPA G Q+                S N+L   + 
Sbjct: 338  SSSPGVDDKLLGKVGNADNDVSNLTDSPAPGFQN-HLQKFYLNLDKLDVDSLNSLGSSIV 396

Query: 4476 DLLQLEDASSGDSNFVKSTAMNKLLLMKSELSKALEKTECEIDLFENELKLLNSKVESKA 4297
            +L+Q +D SS DS  V+S A+NKLL+ K+++SK LE TE EIDL ENELK L S+   ++
Sbjct: 397  ELVQSDDPSSDDSGLVRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESVDRS 456

Query: 4296 RYSVASDSR---------EHMGAVSNVFQKPVPLQLESSSCLN-VDLPNSCNNALEEVHG 4147
               VAS S+         E    VS    +PVPL++ SS   N V +P S N  L  +H 
Sbjct: 457  ECPVASGSQQADSSSKFYEERVEVSQKVIRPVPLKIISSDEPNTVKMPQSTN--LCSIHE 514

Query: 4146 EGKDDEIDSPGTATSKFVETLCMETPLQVYTMGRND-GRSIEDITARPVSSEQHCLLPSA 3970
              K+++IDSPG+ATSKFVE L +      YT G ++  R +  +     S+   C +   
Sbjct: 515  NDKEEDIDSPGSATSKFVEPLPVNAVSSSYTRGYDNLSRDMNAVQ----STMMKCFVRCN 570

Query: 3969 AEKLAVSG--NGHEDQQVGSICTDVLSQMSAECELNDV---IFVSNRNCAAKSFEVFSKL 3805
             +  +VS   N +   +V     DV    +      D    I  SN+  A ++ ++F+KL
Sbjct: 571  RKNTSVSACNNVNTPTEVKDSLGDVTFGANLCSSYGDTYKSIIASNKESANRAHKLFTKL 630

Query: 3804 LPTDNSEIDIWGSCSISCQK-NNSLVKQRLAARKCFQRFKERVLTLKFRALHYLWKEDVR 3628
            +P    E    G+  +S    +++ + Q+ A +K F+RFKERV+ LKF+ALH+LWKED+R
Sbjct: 631  VP---KECKKHGNMGVSNDSFSHTSILQKFAEKKQFERFKERVIALKFKALHHLWKEDMR 687

Query: 3627 L---RKYKAKSQKRIESNSRTLHIVNQKHRSNIRSRFTSPAGS-LTLVPTSEIVDFTSKL 3460
            L   RK + KS K+ E N RT    N K+RS+IRSRFT PAG+ L+LVPT+EI++FTSKL
Sbjct: 688  LLSIRKCRPKSHKKNELNVRTTCSSNMKNRSSIRSRFTFPAGNHLSLVPTTEIINFTSKL 747

Query: 3459 LSDSQVKLCRDNLKMPSL-LDVKEKRISRFVTSNGLVEDPFAAEKERMMINPWMPEEKEI 3283
            LS+SQ +L R+ LKMP+L LD KEK +++F++SNGLVEDP A EKER MINPW  EEKE+
Sbjct: 748  LSESQAQLQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERSMINPWTSEEKEL 807

Query: 3282 FLEKLGTFGKDFKKIASYLDHKTTADCVEFYYKNHKSESFEAVKKKSELRKQEKGFPTST 3103
            FLEK   FGKDF+KIAS+LDHKTTADC+EFYYKNHKSE FE +K+K ++ K  K +   T
Sbjct: 808  FLEKFAAFGKDFRKIASFLDHKTTADCIEFYYKNHKSECFEKLKRK-DIGKLGKSYAAKT 866

Query: 3102 YLMTSGKKWNREVNAASLDLLGEASVIAAHADCSLKSQHTYMSRAVLGGHYYHKTCWGDD 2923
             LM SGKKWN EVN +SLD+L  ASV+A      +        R  L G+   K   G+D
Sbjct: 867  NLMASGKKWNHEVNVSSLDILSAASVMAD----VIAGNKRMRGRRYLLGYGNVKASRGED 922

Query: 2922 ASYEKSSSVDILGSERE-AAAADTLAGICGALSSEAMSSCVTSSVDPGESCQEVKFQK-N 2749
            +  E+S+S D LG ERE AAAAD LAGICG+ SSEAMSSC+TSS+DP +  +E KF K N
Sbjct: 923  SIIERSNSFDTLGDERETAAAADVLAGICGSFSSEAMSSCITSSIDPVDGNKETKFLKAN 982

Query: 2748 SVTDRPLTPKYMQTIDDEETCSDESCGELDSVDWTDEEKSNFIDALRSFGKDFVKISLCV 2569
             +  +PLTP   Q  DD ETCSDESCGE  + +WTD+E + F+ A+ SFGKDF KIS CV
Sbjct: 983  PLFKQPLTPDISQNADD-ETCSDESCGE--ATEWTDDETAAFLQAVSSFGKDFEKISRCV 1039

Query: 2568 RSRSRDQCKVFFSKARKSLGLDDFHLGGGSEGTPVS-DINGGRSDTEDACVLEMESAICS 2392
             +++++ CK FFSK RK LGL+  +   G  G+P++ D NGG SDT+DACV+E  S + +
Sbjct: 1040 GTKAQEHCKRFFSKTRKCLGLNLANPVPGINGSPLNDDANGGESDTDDACVVEAGSVVDA 1099

Query: 2391 TQSCSKMEIDLQFYVMNTSCEVVEHAATNHLQLNE-SDRLGEKNGKELLNNLQIDKPEKS 2215
             +S +K + DL    +NT      H  +N L+    S +L E               E S
Sbjct: 1100 DKSGNKTDEDLPSDALNTF-----HDESNPLEATSLSAKLNESR-------------EIS 1141

Query: 2214 GENNDVVLNRDDGVLDAEGLILNKCEPADKSELVLCGRDSSVKVS---------ESLDGS 2062
            G   +V L   D    A  + +     +D S + LC  D S  V+         ES+  S
Sbjct: 1142 G--TEVCLENVDVASVACAINVESKLGSDVSGVGLCTTDKSGSVNGVGLGGTVRESISAS 1199

Query: 2061 PEIMRPDSFLGKDSSLSCEVHQHAAFTHSTDAVKQHRTTTP-TNESLCAEMPGGVTRTMS 1885
             EI++P                         +V   RT +  ++  LC        R  +
Sbjct: 1200 -EIIKP---------------------RECGSVALDRTVSEGSSGGLCLGSEVERQRVSA 1237

Query: 1884 VDAIEHKAISRSSADGLNVESGLEQGSVDGSQNVKTGLETNTSSSSGCFSQDTNIYRHPS 1705
               +  K +   +  G+ VE  L+   ++ S           +S SG             
Sbjct: 1238 PHCVVDKDVEHVADAGVVVE--LKNCVLESSTAANVSFSPVVNSCSGL------------ 1283

Query: 1704 NLASERSISQSFSPIQNQHQNPLELLHSVQKAHGASWKQK-EDSPASANS-VLPGSVIHF 1531
                      SF   +N+H        S  K H ++      D  A+ANS +L  +    
Sbjct: 1284 ----------SFGS-ENKHV-------SFGKPHTSALSMSMSDLQATANSLLLKAAAAQC 1325

Query: 1530 EDHLRQGSSSSTLNFDGSRNEQHQKLVSAEVYQRYLSNNSLNRIDSLQILRGYPLQVLNK 1351
            E  + Q   SST +  G R+ +     S   +Q  LS    + ++++ +L+GY +QV  K
Sbjct: 1326 EKTVSQDRLSSTCDIQGGRDMRCHSSGSNGDHQLPLSG---SHVETVSVLQGYSMQVPIK 1382

Query: 1350 KDVNGHVDSGSEENHSVIHNSLTSGNHQSGKFIGQDKKCKGSELPHSLAELSLLSKNHEK 1171
            K+V+G V+  S                                   S AE  LL +   K
Sbjct: 1383 KEVDGDVNCSS-----------------------------------SAAEFPLLPQK-VK 1406

Query: 1170 LPSGHTRSRSQGSADTDEHSCRNGNVKLFGQILSHHPSTSQKTNVILQET-DNTAAVPQS 994
               GH +     S    E + RNG+VKLFG+IL+ +PS++Q  N+  + + +N +  P+ 
Sbjct: 1407 QTDGHFKPSFHSS--NSEKTSRNGDVKLFGKILT-NPSSTQNPNLTAKRSEENGSHHPKL 1463

Query: 993  SSNVFELKVPDH-GTDRPLTASMFDGNRHSCDDFPARSYGFWDGS---RTQTGLTSLPDS 826
            ++    L    H  +D  L    F       ++ P  SYG+W+G+     Q+GL+SLPDS
Sbjct: 1464 NNKSSNLNFTGHQNSDENLNFLKF-----GLENVPVMSYGYWEGNAIQSRQSGLSSLPDS 1518

Query: 825  SILLTKYPPAFSEYSTASSCGDQQ-SLPAIITRNDRNLGSISVCPVKDVRGNGNLPDYQG 649
            S LL KYP AFS Y T+SS  +QQ  L A    + R+L   S    +DV G+  + DYQ 
Sbjct: 1519 SFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSQRHLTGASTFTARDVNGSNAMLDYQM 1578

Query: 648  SRSYDGAKVQPFTVDVK-RHDTFSELQKRKGIE-MSSFQKQAR-VVGMNVMG-TGILVGG 481
             R  DG +VQPF VDV+ R D FSE+Q+R   E +SS Q+Q R ++GMN +G  GILVGG
Sbjct: 1579 FRGRDGPQVQPFMVDVQHRQDLFSEMQRRHSFEAISSLQQQGRGMMGMNSVGRPGILVGG 1638

Query: 480  SCTGVSDPVAAIKMHYATTERYGGHNGS-IREEDSW--REDMGR 358
            SC+GVSDPVAAIKMHY+ +E+YGG NGS +R+++SW  + D+GR
Sbjct: 1639 SCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDESWGGKGDLGR 1682


>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
            gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
            [Medicago truncatula]
          Length = 1655

 Score =  959 bits (2478), Expect = 0.0
 Identities = 715/1844 (38%), Positives = 975/1844 (52%), Gaps = 63/1844 (3%)
 Frame = -2

Query: 5700 MPPEPLPWERKDVVVYRKHDRSDGGLIRSGVARWRDXXXXXXXXXXXXXXXXXSREFGHR 5521
            MPPEPLPW+RKD    RKHDRS+       VARWRD                  R+F +R
Sbjct: 1    MPPEPLPWDRKDFFKERKHDRSEAV---GSVARWRDSSHH--------------RDF-NR 42

Query: 5520 WASDDFR-RPQGHGKQGGQQLYSEDSAGYGCVPFRASDRMVGDENG--FRSRNAKYVNRN 5350
            W S +FR RP GHGKQGG  ++SE+  G+G    R+ D+M+ +E+G    SR      R+
Sbjct: 43   WGSAEFRSRPPGHGKQGGWHMFSEEP-GHGYGVSRSGDKML-EEDGRPLVSRGDGKYGRS 100

Query: 5349 TREVKGS-FSYKETKGYLWES--GDANASVRQHDLNI-QRSVSDLLTYTPHPQSDVVDNS 5182
            +R+ +G  F  ++ +G+ WE+  G  N S R  D+N  QRSV D  TY+ HP SD V+  
Sbjct: 101  SRDNRGGPFGQRDWRGHSWEASNGSPNLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVN-- 158

Query: 5181 SWDDLQLRDHQNDKLATVDALGTGHRYGKEQSLGPTGWKPLKWNXXXXXXXXXXXXXXXX 5002
            +W+   L+D Q+ K   V+ LGTG R  +E SL    WKPLKW                 
Sbjct: 159  TWEQHNLKD-QHAKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTRSGSLSSRGSGFSHSS 217

Query: 5001 XXXXXGA-DSDETKPDLPSGRATPVHXXXXXXXXXXXXXXXGEDTCPRKKQRLGWGQGLA 4825
                    DS E KP+L     T V                 ED   RKK RL WG+GLA
Sbjct: 218  SSRSMAGTDSYEGKPNLKHKNVTAVESNSGEATACVTSSMPSEDATSRKKPRLNWGEGLA 277

Query: 4824 KYEKQKVEGSDETFCKSGMVP-CXXXXXXXXXXXSLPDKSPRVLGPSECASPVTTSSVAC 4648
            KYEK+KV+  D    K G V              +L DKSP+V G S+CASP T SSVAC
Sbjct: 278  KYEKKKVDVPDPGSNKDGSVSSAGNMEPCSSISPNLVDKSPKVTGFSDCASPATPSSVAC 337

Query: 4647 SSSPGIDDKPHIKAANDDIDTCNLSVSPAHGVQSCXXXXXXXXXXXXSATSFNTL---LN 4477
            SSSPG+DDK   K  N D D  NL+ SPA G Q+                S N+L   + 
Sbjct: 338  SSSPGVDDKLLGKVGNADNDVSNLTDSPAPGFQN-HLQKFYLNLDKLDVDSLNSLGSSIV 396

Query: 4476 DLLQLEDASSGDSNFVKSTAMNKLLLMKSELSKALEKTECEIDLFENELKLLNSKVESKA 4297
            +L+Q +D SS DS  V+S A+NKLL+ K+++SK LE TE EIDL ENELK L S+   ++
Sbjct: 397  ELVQSDDPSSDDSGLVRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESVDRS 456

Query: 4296 RYSVASDSR---------EHMGAVSNVFQKPVPLQLESSSCLN-VDLPNSCNNALEEVHG 4147
               VAS S+         E    VS    +PVPL++ SS   N V +P S N  L  +H 
Sbjct: 457  ECPVASGSQQADSSSKFYEERVEVSQKVIRPVPLKIISSDEPNTVKMPQSTN--LCSIHE 514

Query: 4146 EGKDDEIDSPGTATSKFVETLCMETPLQVYTMGRND-GRSIEDITARPVSSEQHCLLPSA 3970
              K+++IDSPG+ATSKFVE L +      YT G ++  R +  +     S+   C +   
Sbjct: 515  NDKEEDIDSPGSATSKFVEPLPVNAVSSSYTRGYDNLSRDMNAVQ----STMMKCFVRCN 570

Query: 3969 AEKLAVSG--NGHEDQQVGSICTDVLSQMSAECELNDV---IFVSNRNCAAKSFEVFSKL 3805
             +  +VS   N +   +V     DV    +      D    I  SN+  A ++ ++F+KL
Sbjct: 571  RKNTSVSACNNVNTPTEVKDSLGDVTFGANLCSSYGDTYKSIIASNKESANRAHKLFTKL 630

Query: 3804 LPTDNSEIDIWGSCSISCQK-NNSLVKQRLAARKCFQRFKERVLTLKFRALHYLWKEDVR 3628
            +P    E    G+  +S    +++ + Q+ A +K F+RFKERV+ LKF+ALH+LWKED+R
Sbjct: 631  VP---KECKKHGNMGVSNDSFSHTSILQKFAEKKQFERFKERVIALKFKALHHLWKEDMR 687

Query: 3627 L---RKYKAKSQKRIESNSRTLHIVNQKHRSNIRSRFTSPAGS-LTLVPTSEIVDFTSKL 3460
            L   RK + KS K+ E N RT    N K+RS+IRSRFT PAG+ L+LVPT+EI++FTSKL
Sbjct: 688  LLSIRKCRPKSHKKNELNVRTTCSSNMKNRSSIRSRFTFPAGNHLSLVPTTEIINFTSKL 747

Query: 3459 LSDSQVKLCRDNLKMPSL-LDVKEKRISRFVTSNGLVEDPFAAEKERMMINPWMPEEKEI 3283
            LS+SQ +L R+ LKMP+L LD KEK +++F++SNGLVEDP A EKER MINPW  EEKE+
Sbjct: 748  LSESQAQLQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERSMINPWTSEEKEL 807

Query: 3282 FLEKLGTFGKDFKKIASYLDHKTTADCVEFYYKNHKSESFEAVKKKSELRKQEKGFPTST 3103
            FLEK   FGKDF+KIAS+LDHKTTADC+EFYYKNHKSE FE +K+K ++ K  K +   T
Sbjct: 808  FLEKFAAFGKDFRKIASFLDHKTTADCIEFYYKNHKSECFEKLKRK-DIGKLGKSYAAKT 866

Query: 3102 YLMTSGKKWNREVNAASLDLLGEASVIAAHADCSLKSQHTYMSRAVLGGHYYHKTCWGDD 2923
             LM SG K  R                                R  L G+   K   G+D
Sbjct: 867  NLMASGNKRMR-------------------------------GRRYLLGYGNVKASRGED 895

Query: 2922 ASYEKSSSVDILGSERE-AAAADTLAGICGALSSEAMSSCVTSSVDPGESCQEVKFQK-N 2749
            +  E+S+S D LG ERE AAAAD LAGICG+ SSEAMSSC+TSS+DP +  +E KF K N
Sbjct: 896  SIIERSNSFDTLGDERETAAAADVLAGICGSFSSEAMSSCITSSIDPVDGNKETKFLKAN 955

Query: 2748 SVTDRPLTPKYMQTIDDEETCSDESCGELDSVDWTDEEKSNFIDALRSFGKDFVKISLCV 2569
             +  +PLTP   Q  DD ETCSDESCGE  + +WTD+E + F+ A+ SFGKDF KIS CV
Sbjct: 956  PLFKQPLTPDISQNADD-ETCSDESCGE--ATEWTDDETAAFLQAVSSFGKDFEKISRCV 1012

Query: 2568 RSRSRDQCKVFFSKARKSLGLDDFHLGGGSEGTPVS-DINGGRSDTEDACVLEMESAICS 2392
             +++++ CK FFSK RK LGL+  +   G  G+P++ D NGG SDT+DACV+E  S + +
Sbjct: 1013 GTKAQEHCKRFFSKTRKCLGLNLANPVPGINGSPLNDDANGGESDTDDACVVEAGSVVDA 1072

Query: 2391 TQSCSKMEIDLQFYVMNTSCEVVEHAATNHLQLNE-SDRLGEKNGKELLNNLQIDKPEKS 2215
             +S +K + DL    +NT      H  +N L+    S +L E               E S
Sbjct: 1073 DKSGNKTDEDLPSDALNTF-----HDESNPLEATSLSAKLNESR-------------EIS 1114

Query: 2214 GENNDVVLNRDDGVLDAEGLILNKCEPADKSELVLCGRDSSVKVS---------ESLDGS 2062
            G   +V L   D    A  + +     +D S + LC  D S  V+         ES+  S
Sbjct: 1115 G--TEVCLENVDVASVACAINVESKLGSDVSGVGLCTTDKSGSVNGVGLGGTVRESISAS 1172

Query: 2061 PEIMRPDSFLGKDSSLSCEVHQHAAFTHSTDAVKQHRTTTP-TNESLCAEMPGGVTRTMS 1885
             EI++P                         +V   RT +  ++  LC        R  +
Sbjct: 1173 -EIIKP---------------------RECGSVALDRTVSEGSSGGLCLGSEVERQRVSA 1210

Query: 1884 VDAIEHKAISRSSADGLNVESGLEQGSVDGSQNVKTGLETNTSSSSGCFSQDTNIYRHPS 1705
               +  K +   +  G+ VE  L+   ++ S           +S SG             
Sbjct: 1211 PHCVVDKDVEHVADAGVVVE--LKNCVLESSTAANVSFSPVVNSCSGL------------ 1256

Query: 1704 NLASERSISQSFSPIQNQHQNPLELLHSVQKAHGASWKQK-EDSPASANS-VLPGSVIHF 1531
                      SF   +N+H        S  K H ++      D  A+ANS +L  +    
Sbjct: 1257 ----------SFGS-ENKHV-------SFGKPHTSALSMSMSDLQATANSLLLKAAAAQC 1298

Query: 1530 EDHLRQGSSSSTLNFDGSRNEQHQKLVSAEVYQRYLSNNSLNRIDSLQILRGYPLQVLNK 1351
            E  + Q   SST +  G R+ +     S   +Q  LS    + ++++ +L+GY +QV  K
Sbjct: 1299 EKTVSQDRLSSTCDIQGGRDMRCHSSGSNGDHQLPLSG---SHVETVSVLQGYSMQVPIK 1355

Query: 1350 KDVNGHVDSGSEENHSVIHNSLTSGNHQSGKFIGQDKKCKGSELPHSLAELSLLSKNHEK 1171
            K+V+G V+  S                                   S AE  LL +   K
Sbjct: 1356 KEVDGDVNCSS-----------------------------------SAAEFPLLPQK-VK 1379

Query: 1170 LPSGHTRSRSQGSADTDEHSCRNGNVKLFGQILSHHPSTSQKTNVILQET-DNTAAVPQS 994
               GH +     S    E + RNG+VKLFG+IL+ +PS++Q  N+  + + +N +  P+ 
Sbjct: 1380 QTDGHFKPSFHSS--NSEKTSRNGDVKLFGKILT-NPSSTQNPNLTAKRSEENGSHHPKL 1436

Query: 993  SSNVFELKVPDH-GTDRPLTASMFDGNRHSCDDFPARSYGFWDGS---RTQTGLTSLPDS 826
            ++    L    H  +D  L    F       ++ P  SYG+W+G+     Q+GL+SLPDS
Sbjct: 1437 NNKSSNLNFTGHQNSDENLNFLKF-----GLENVPVMSYGYWEGNAIQSRQSGLSSLPDS 1491

Query: 825  SILLTKYPPAFSEYSTASSCGDQQ-SLPAIITRNDRNLGSISVCPVKDVRGNGNLPDYQG 649
            S LL KYP AFS Y T+SS  +QQ  L A    + R+L   S    +DV G+  + DYQ 
Sbjct: 1492 SFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSQRHLTGASTFTARDVNGSNAMLDYQM 1551

Query: 648  SRSYDGAKVQPFTVDVK-RHDTFSELQKRKGIE-MSSFQKQAR-VVGMNVMG-TGILVGG 481
             R  DG +VQPF VDV+ R D FSE+Q+R   E +SS Q+Q R ++GMN +G  GILVGG
Sbjct: 1552 FRGRDGPQVQPFMVDVQHRQDLFSEMQRRHSFEAISSLQQQGRGMMGMNSVGRPGILVGG 1611

Query: 480  SCTGVSDPVAAIKMHYATTERYGGHNGS-IREEDSW--REDMGR 358
            SC+GVSDPVAAIKMHY+ +E+YGG NGS +R+++SW  + D+GR
Sbjct: 1612 SCSGVSDPVAAIKMHYSNSEKYGGQNGSVVRDDESWGGKGDLGR 1655