BLASTX nr result
ID: Coptis25_contig00001503
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001503
(1576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329988.1| predicted protein [Populus trichocarpa] gi|2... 117 6e-24
emb|CAN81307.1| hypothetical protein VITISV_026538 [Vitis vinifera] 117 8e-24
ref|XP_002512588.1| GRIP and coiled-coil domain-containing prote... 114 7e-23
ref|XP_002318920.1| predicted protein [Populus trichocarpa] gi|2... 110 1e-21
emb|CAN76245.1| hypothetical protein VITISV_023381 [Vitis vinifera] 106 2e-20
>ref|XP_002329988.1| predicted protein [Populus trichocarpa] gi|222871413|gb|EEF08544.1|
predicted protein [Populus trichocarpa]
Length = 757
Score = 117 bits (294), Expect = 6e-24
Identities = 110/399 (27%), Positives = 171/399 (42%), Gaps = 44/399 (11%)
Frame = +1
Query: 28 LEDKEVVAIPDVLDKANVDSAQKGETPLDVVENSSEELALEVGKAEEEKLEKIKDGESA- 204
+++ E VA+ D+ D V K E+ + VE E+ + E +E+++ ESA
Sbjct: 371 IKESEAVAVKDINDSVAVPEVDKPESAVPEVEVKQEK--------QSEVIEQVEKPESAV 422
Query: 205 ---------EPKTTKQ-EVGVDANPATEVIKESFEEPVLSRXXXXXXXXXXXXXXRDGIV 354
+P+ T+Q E P EV E E R +
Sbjct: 423 PQVEVKLVEQPEVTEQVEKPESLGPEVEVKPEEQPEVTTHTEKQKKHEVELKTEARSEVS 482
Query: 355 PSVDTANGTEP------------VTIKNEEGADSSSAILAGKSFEGEKT----SEPVQVI 486
V+ E V +K + G S ++ E EK ++PV+V
Sbjct: 483 EQVEIKPTNEKPEEVAGITQEAEVDVKEDIGKSSLPEVVGKVGPEDEKREAEGTDPVEVP 542
Query: 487 ------------EEKIQEDIKSEFASV--EIKKDTEPHSTDTEDGNDSNSAAEVAEKSFD 624
EEK + K E ++ E K+ H ED +D+ S AEV EKSF+
Sbjct: 543 VKEVVVEAEKGGEEKEAQTTKDEGENIASETLKEELAHPIKVEDVSDAVSNAEVTEKSFE 602
Query: 625 GEKAFKDVDVVPDEKKEENVKDDTTSLIEIAKDTILEGQVNVPSIVDTPNXXXXXXXXXX 804
GEK ++V ++KKEE T KD +EG+++ + + +
Sbjct: 603 GEKTVENVVPAVEDKKEEIPAGKETE-----KDQKIEGKLDEATTIGSETVKESQDSGLE 657
Query: 805 XXXX---KNVDELAKAAEVSEDTPKPEASKVEELSKSVDVLKTNEDPPKDKVLTKPVHKQ 975
KN E ++ +V E + +K D +K ++D P++ V KP K
Sbjct: 658 AKEEESAKNNKENSEQEKVDEIAKSDTQNLEPSTTKDADDIKVSQDLPRE-VPAKPTQKH 716
Query: 976 SNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQV 1092
SNNIL+KVK ++VK KKAI GKSP+ KT++SD KGD++V
Sbjct: 717 SNNILTKVKQSLVKAKKAIIGKSPTPKTVSSDTKGDVKV 755
>emb|CAN81307.1| hypothetical protein VITISV_026538 [Vitis vinifera]
Length = 1328
Score = 117 bits (293), Expect = 8e-24
Identities = 106/351 (30%), Positives = 157/351 (44%), Gaps = 6/351 (1%)
Frame = +1
Query: 58 DVLDKANVDSA-QKGETPLDVVENSSEELALEVGKAEEEKLEKIKDGESAEPKTTKQEVG 234
DV++KA + K E DVVE S++ + K E++K EK E +E K TK E
Sbjct: 671 DVIEKAAARATVYKEEGGGDVVERLSKDETVVAAKVEQQKEEKNVKIEDSEGKNTKVEES 730
Query: 235 VDANPATEVIKESFEEPVLSRXXXXXXXXXXXXXXRDGIVPSVDTANGT----EPVTIKN 402
+ A D NG+ E I
Sbjct: 731 IQTETA-----------------------------------KTDDRNGSNFVAEVAEIDR 755
Query: 403 EEGADSSSAILAGKSFEGEKTSEPVQVIEEKIQEDIKS-EFASVEIKKDTEPHSTDTEDG 579
E+ + + K E + P+ V +K I+ E + ++++ + + T+D
Sbjct: 756 EQVSRDVEXVAEVKKLENVEEDIPLSVEADKKNVKIEDCEGKNTKVEESIQTETAKTDDR 815
Query: 580 NDSNSAAEVAEKSFDGEKAFKDVDVVPDEKKEENVKDDTTSLIEIAKDTILEGQVNVPSI 759
N SN AEVAE D E+ +DV+VV + KK ENV++D +E KD EG+++
Sbjct: 816 NGSNFVAEVAE--IDREQVSRDVEVVAEVKKLENVEEDIPLSVEADKDKDGEGKLSEVDA 873
Query: 760 VDTPNXXXXXXXXXXXXXXKNVDELAKAAEVSEDTPKPEASKVEELSKSVDVLKTNEDPP 939
+T N D L ++A+ + K +E L K+ D KT+ PP
Sbjct: 874 KETVKT--------------NADNL-ESAKTDGEIAKSNPPNLETL-KNGDDSKTSAKPP 917
Query: 940 KDKVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQV 1092
K V K SNN++SKVK +IVKVKKAITGKSPS K + +AKGD ++
Sbjct: 918 KQD---DSVKKHSNNLISKVKQSIVKVKKAITGKSPSPKALLPEAKGDEKI 965
>ref|XP_002512588.1| GRIP and coiled-coil domain-containing protein, putative [Ricinus
communis] gi|223548549|gb|EEF50040.1| GRIP and
coiled-coil domain-containing protein, putative [Ricinus
communis]
Length = 799
Score = 114 bits (285), Expect = 7e-23
Identities = 106/357 (29%), Positives = 160/357 (44%), Gaps = 2/357 (0%)
Frame = +1
Query: 31 EDKEVVAIPDVLDKANVDSAQKGETPLDVVENSSEELALEVGKAEEEKLEKIKDGESAEP 210
E+ EVV I +V +D K + P + E + EL K+++EK E ++
Sbjct: 479 EESEVVVIEEVEKPKLLDPEAKVK-PKEESEVAEVEL-----KSKDEKTEPVQS------ 526
Query: 211 KTTKQEVGVDANPATEVIKESFEEPVLSRXXXXXXXXXXXXXXRDGIVPSVDTANGTEPV 390
+V V A+ EV + EE L+ ++ + + V
Sbjct: 527 -----DVKVKADGEPEVSQTLTEEGSLADKVEDSTSVEEKEASKE----AESCTSSLPDV 577
Query: 391 TIKN--EEGADSSSAILAGKSFEGEKTSEPVQVIEEKIQEDIKSEFASVEIKKDTEPHST 564
T+K E+G + + E + + EEK + IK+ V ++ +P
Sbjct: 578 TVKAALEDGRKEGEGTIVAEVLSKEAEVDIKKGDEEKEENTIKTIDRDVLNEEVAQPIKV 637
Query: 565 DTEDGNDSNSAAEVAEKSFDGEKAFKDVDVVPDEKKEENVKDDTTSLIEIAKDTILEGQV 744
D D ++ S+AEV E+SF+ E K V+ + + K EEN+ D+ +L+E D
Sbjct: 638 D--DVKNAVSSAEVIERSFEEEITGKGVEPIVENKGEENLTDEKLALVETRND------- 688
Query: 745 NVPSIVDTPNXXXXXXXXXXXXXXKNVDELAKAAEVSEDTPKPEASKVEELSKSVDVLKT 924
VD ++ D K + K E VEE +K D +KT
Sbjct: 689 -----VDVEVKRDETTTTVAESVQESQDSAVKEVSANTGEDKLEKENVEESTKGGDDVKT 743
Query: 925 NEDPPKDKVLTKPVHKQSNNILSKVKHTIVKVKKAITGKSPSSKTITSDAKGDIQVK 1095
+ D P + V KP KQSNNIL+KVK ++VK KKAI GKSPSSKT+ SD K DI+VK
Sbjct: 744 SRDLPTE-VPAKPNQKQSNNILTKVKQSLVKAKKAIIGKSPSSKTLASDTKDDIKVK 799
>ref|XP_002318920.1| predicted protein [Populus trichocarpa] gi|222857296|gb|EEE94843.1|
predicted protein [Populus trichocarpa]
Length = 724
Score = 110 bits (275), Expect = 1e-21
Identities = 103/380 (27%), Positives = 172/380 (45%), Gaps = 25/380 (6%)
Frame = +1
Query: 28 LEDKEVVAIPDVLDKANVDSAQKGETPLDVVENSSEELALEVGKAEEEKLEKIKDGESAE 207
+++ E V + D+ D V K + P+ + E + LEV +EE+ E + E E
Sbjct: 357 IKESEAVPLKDIDDLVAVPGVDKPQ-PVIPEADKPEPVVLEVEVKQEEQSEVTQQIEKPE 415
Query: 208 PKTTKQEVGVDANPATEVIKESFEEPVLS-----RXXXXXXXXXXXXXXRDGIVPSVDTA 372
+ EV ++ + E EE + + + G V ++
Sbjct: 416 SVVPETEVKLEEQSEVSKLDEKTEEHEVEVKPEGQYEVSEQVEIKSTDEKRGQVAAITQV 475
Query: 373 NGTEPVTIKNEEGADSSSAILAGKSFEGEKTSEPVQVIEEKIQEDIKS--EFASVEIKKD 546
E IK + G S I+ E E T ++E + E K E + IK +
Sbjct: 476 AQAE---IKEDGGKSSLPEIIQKAGPEAEGTDLAEASLKEIVVEAEKGREEKEARTIKAE 532
Query: 547 TEPHSTDT-----------EDGNDSNSAAEVAEKSFDGEKAFKDVDVVPDEKKEENVKDD 693
E ++DT E+ +++ S A++ EKSF+GEK + V+ + KKEE D
Sbjct: 533 GEKIASDTVKEELAQPIKVEEVSNAASNAKITEKSFEGEKTVESVEPALENKKEEIPAID 592
Query: 694 TTSLIEIAKDTILEGQVN-VPSIVDTPNXXXXXXXXXXXXXXKNVDELAKAAEVS----- 855
T KD +EG+++ ++V P K +E AK E +
Sbjct: 593 ETH-----KDGTIEGKLDEATTVVSEP----VKESQDSVSEAKEEEETAKTNEENSEQEK 643
Query: 856 -EDTPKPEASKVEELSKSVDVLKTNEDPPKDKVLTKPVHKQSNNILSKVKHTIVKVKKAI 1032
++ K + +E ++ + K ++D P++ V KP K SNNIL++VK ++VK KKAI
Sbjct: 644 VDEIAKSDTQNLEYSTQDAEDAKESQDLPRE-VPAKPTQKHSNNILTRVKQSLVKAKKAI 702
Query: 1033 TGKSPSSKTITSDAKGDIQV 1092
GKSP+ KT++SD+KGD++V
Sbjct: 703 IGKSPTPKTVSSDSKGDVKV 722
>emb|CAN76245.1| hypothetical protein VITISV_023381 [Vitis vinifera]
Length = 778
Score = 106 bits (264), Expect = 2e-20
Identities = 100/364 (27%), Positives = 160/364 (43%), Gaps = 24/364 (6%)
Frame = +1
Query: 34 DKEVVAIPDVLDKANVD--SAQKGETPLDVVENSSEELALEVGKAEEEKLEKIKDGESAE 207
+K+ A+P+V +K + + +K T ++ S E+ E+ K +E +K++D +
Sbjct: 423 EKQEPAVPEVEEKPQEEPEATEKVNTESEIEHKESAEI--EIVKDKETLADKVEDTIVLK 480
Query: 208 PKTTKQEVG----------------VDANPATEVIKESF---EEPVLSRXXXXXXXXXXX 330
+ TK++ V A+P + + S E +
Sbjct: 481 EEETKKDQEPFPSATADQLVLINQEVQADPKGDGWETSLPRVSEKEVKELEKIKEDEANY 540
Query: 331 XXXRDGIVPSVDTANGTEPVTIKNEEGADS-SSAILAGKSFEGEKTSEPVQVIEEKIQED 507
+ V T T+P +K EE ++S S+A + K EGE + +ED
Sbjct: 541 VKTENENEEHVSTKELTQPEILKVEEVSNSISNAEVTEKLLEGENANT---------EED 591
Query: 508 IKSEFASVEIKKDTEPHSTDTEDGNDSNSAAEVAEKSFDGEKAFKDVDVVPDEKKEE--N 681
K + T+P + ED + S +A EV EK F+GE +DV++ + KKEE +
Sbjct: 592 DKDN-----VIISTQPETKTIEDASSSLAATEVTEKLFEGENTSRDVELFSENKKEELTS 646
Query: 682 VKDDTTSLIEIAKDTILEGQVNVPSIVDTPNXXXXXXXXXXXXXXKNVDELAKAAEVSED 861
V+ D +E D + + P+ T +E AKA++ +
Sbjct: 647 VETDKDGELEGKLDEVTTADIVKPTTEPTETELEVKGESQETELELKEEETAKASKEVNE 706
Query: 862 TPKPEASKVEELSKSVDVLKTNEDPPKDKVLTKPVHKQSNNILSKVKHTIVKVKKAITGK 1041
K + +E VD KT +D PK +V KP KQSNNI+SKVK ++VK KKAITGK
Sbjct: 707 AAKSDVP-LESAKDGVDE-KTTQDLPKQEVSAKPAQKQSNNIISKVKQSLVKAKKAITGK 764
Query: 1042 SPSS 1053
S S
Sbjct: 765 SSRS 768