BLASTX nr result

ID: Coptis25_contig00001502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001502
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855...   447   e-123
emb|CBI19742.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_004164003.1| PREDICTED: bifunctional nuclease 1-like [Cuc...   429   e-118
ref|XP_004147851.1| PREDICTED: bifunctional nuclease 1-like [Cuc...   427   e-117

>ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855103 [Vitis vinifera]
          Length = 327

 Score =  447 bits (1150), Expect = e-123
 Identities = 231/335 (68%), Positives = 270/335 (80%), Gaps = 13/335 (3%)
 Frame = -1

Query: 1205 MGVLQQGPVVCPSLRTKQAVVMNGRLFSSTVVTKRSCKVGIIKINHFSYKGS-------- 1050
            MG LQ GPV+CP++R K+A V       +  V+    K  I +   + ++G+        
Sbjct: 1    MGTLQ-GPVICPTVRAKEAGVY------TLPVSLPLKKTKIFRSGFWGFRGNCGGRTKAG 53

Query: 1049 -----VLARRGNIIQCTYSSSSNDNGSTAENFDENNDEYVNSSVVEAVEVKSGADGFMIK 885
                 +  R+   +QC++SSSS+ NGS AENF+EN+++YVNSSVVEAVEVKSGADGFMIK
Sbjct: 54   SVPHQLHTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIK 113

Query: 884  MRDGKRFRCVHNNPQSGHLPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQ 705
            MRDG+  RCVHNNPQ GH+PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+Q
Sbjct: 114  MRDGRHLRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQ 173

Query: 704  IPRPTLYQLAKVMIEKMGYEVKLARVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAI 525
            I RPTLYQ+ K MI+KMGY VKL RVTKRVHEAYFAQL+L+K+GNE E +SFDLRPSDAI
Sbjct: 174  IARPTLYQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDAI 233

Query: 524  NIAVRCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFD 345
            NIAVRCKVPIQVNKYLAYSDGMR+IE AK++ +   SDGLLF+ LDRP G+PC+ETKEFD
Sbjct: 234  NIAVRCKVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEFD 293

Query: 344  LVRNMLIAAVEERYRDAAQLRDKLSQLRSKKRNWT 240
            LVRNMLIAAVEERYRDAAQ RDKL+Q RS KRNWT
Sbjct: 294  LVRNMLIAAVEERYRDAAQWRDKLTQFRS-KRNWT 327


>emb|CBI19742.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  447 bits (1150), Expect = e-123
 Identities = 231/335 (68%), Positives = 270/335 (80%), Gaps = 13/335 (3%)
 Frame = -1

Query: 1205 MGVLQQGPVVCPSLRTKQAVVMNGRLFSSTVVTKRSCKVGIIKINHFSYKGS-------- 1050
            MG LQ GPV+CP++R K+A V       +  V+    K  I +   + ++G+        
Sbjct: 29   MGTLQ-GPVICPTVRAKEAGVY------TLPVSLPLKKTKIFRSGFWGFRGNCGGRTKAG 81

Query: 1049 -----VLARRGNIIQCTYSSSSNDNGSTAENFDENNDEYVNSSVVEAVEVKSGADGFMIK 885
                 +  R+   +QC++SSSS+ NGS AENF+EN+++YVNSSVVEAVEVKSGADGFMIK
Sbjct: 82   SVPHQLHTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIK 141

Query: 884  MRDGKRFRCVHNNPQSGHLPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQ 705
            MRDG+  RCVHNNPQ GH+PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+Q
Sbjct: 142  MRDGRHLRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQ 201

Query: 704  IPRPTLYQLAKVMIEKMGYEVKLARVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAI 525
            I RPTLYQ+ K MI+KMGY VKL RVTKRVHEAYFAQL+L+K+GNE E +SFDLRPSDAI
Sbjct: 202  IARPTLYQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDAI 261

Query: 524  NIAVRCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFD 345
            NIAVRCKVPIQVNKYLAYSDGMR+IE AK++ +   SDGLLF+ LDRP G+PC+ETKEFD
Sbjct: 262  NIAVRCKVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEFD 321

Query: 344  LVRNMLIAAVEERYRDAAQLRDKLSQLRSKKRNWT 240
            LVRNMLIAAVEERYRDAAQ RDKL+Q RS KRNWT
Sbjct: 322  LVRNMLIAAVEERYRDAAQWRDKLTQFRS-KRNWT 355


>ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|222842480|gb|EEE80027.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  432 bits (1111), Expect = e-119
 Identities = 221/317 (69%), Positives = 256/317 (80%), Gaps = 4/317 (1%)
 Frame = -1

Query: 1190 QGPVVCPSLRTKQA----VVMNGRLFSSTVVTKRSCKVGIIKINHFSYKGSVLARRGNII 1023
            QGPV+CP++R KQA      M G L  + +V          K         + ARR N +
Sbjct: 5    QGPVICPTVRAKQAGKHAFPMTGPLVKARLVRSELWGFKGYKTKVGLTSRQLKARRCNTV 64

Query: 1022 QCTYSSSSNDNGSTAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDGKRFRCVHNNP 843
            QC+ SSSS+ NGSTAENF+EN+++YVNSSVVEAVEVKSG+DGF+IKMRDG+  RCVHNNP
Sbjct: 65   QCSLSSSSDGNGSTAENFNENDEDYVNSSVVEAVEVKSGSDGFVIKMRDGRHLRCVHNNP 124

Query: 842  QSGHLPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRPTLYQLAKVMI 663
            Q GHLPDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+QI RPT+YQ+ K M+
Sbjct: 125  QGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTMYQVVKDMV 184

Query: 662  EKMGYEVKLARVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAVRCKVPIQVNK 483
            EKMG+EVKL RVTKRVHEAYFAQL+L+KIGNETE +SFDLRPSDAINIAVRCKVPIQVNK
Sbjct: 185  EKMGFEVKLVRVTKRVHEAYFAQLYLTKIGNETECVSFDLRPSDAINIAVRCKVPIQVNK 244

Query: 482  YLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRNMLIAAVEERY 303
            YLAYSDGMR+IE  K   + P SDG+LF+ LDRP G+PC++TKEF+LVRNM  AA EERY
Sbjct: 245  YLAYSDGMRVIESGK-PIQSPASDGILFTELDRPTGQPCLDTKEFNLVRNMFTAAFEERY 303

Query: 302  RDAAQLRDKLSQLRSKK 252
             DAAQ RDKL Q R+K+
Sbjct: 304  GDAAQWRDKLGQFRAKR 320


>ref|XP_004164003.1| PREDICTED: bifunctional nuclease 1-like [Cucumis sativus]
          Length = 327

 Score =  429 bits (1103), Expect = e-118
 Identities = 225/327 (68%), Positives = 266/327 (81%), Gaps = 9/327 (2%)
 Frame = -1

Query: 1205 MGVLQQGPVVCPSLRTKQA----VVMNGRLFSSTVVTKRSCKVGIIKINHFSYKGSVLA- 1041
            MG LQ GPVVCP++  KQA    + +N  L + +   +R    G   IN  + K   ++ 
Sbjct: 1    MGSLQ-GPVVCPTICAKQAGFCSLPINRSLMAFSF--RRGQLWGFTGINGLNAKLPAISL 57

Query: 1040 ----RRGNIIQCTYSSSSNDNGSTAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDG 873
                R+   ++C++SSSS+DNGSTAENF+E N+EYV SSVVEAVEVKSGADGF+IKMRDG
Sbjct: 58   KRCTRKCKTLRCSFSSSSDDNGSTAENFNEKNEEYVESSVVEAVEVKSGADGFVIKMRDG 117

Query: 872  KRFRCVHNNPQSGHLPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRP 693
            +  RCVHNNP  GHLPDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+ I RP
Sbjct: 118  RHLRCVHNNPHGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVPIARP 177

Query: 692  TLYQLAKVMIEKMGYEVKLARVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAV 513
            T+YQ+ K MI+KMGYEVKL RVTKRVHEAYFAQL+LSKIG ET+ +SFDLRPSDAINIAV
Sbjct: 178  TMYQVVKEMIDKMGYEVKLVRVTKRVHEAYFAQLYLSKIGCETDCLSFDLRPSDAINIAV 237

Query: 512  RCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRN 333
            RC+VPIQVNKYLAYSDGMR++E  KL+T+   +DGLLF+ LDRP G+PCVE KEF+LVRN
Sbjct: 238  RCQVPIQVNKYLAYSDGMRVVESGKLSTQALATDGLLFTELDRPSGQPCVEAKEFNLVRN 297

Query: 332  MLIAAVEERYRDAAQLRDKLSQLRSKK 252
            MLIAAVEERYRDAAQ RDKL+ LR+++
Sbjct: 298  MLIAAVEERYRDAAQWRDKLNLLRARR 324


>ref|XP_004147851.1| PREDICTED: bifunctional nuclease 1-like [Cucumis sativus]
          Length = 327

 Score =  427 bits (1099), Expect = e-117
 Identities = 224/327 (68%), Positives = 266/327 (81%), Gaps = 9/327 (2%)
 Frame = -1

Query: 1205 MGVLQQGPVVCPSLRTKQA----VVMNGRLFSSTVVTKRSCKVGIIKINHFSYKGSVLA- 1041
            MG LQ GPVVCP++  KQA    + +N  L + +   +R    G   IN  + K   ++ 
Sbjct: 1    MGSLQ-GPVVCPTICAKQAGFCSLPINRSLMAFSF--RRGQLWGFTGINGLNAKLPAISL 57

Query: 1040 ----RRGNIIQCTYSSSSNDNGSTAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDG 873
                R+   ++C++SSSS+DNGSTAENF+E N+EYV SSVVEAVEVKSGADGF+IKMRDG
Sbjct: 58   KRCTRKCKTLRCSFSSSSDDNGSTAENFNEKNEEYVESSVVEAVEVKSGADGFVIKMRDG 117

Query: 872  KRFRCVHNNPQSGHLPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRP 693
            +  RCVHNNP  GHLPDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+ I RP
Sbjct: 118  RHLRCVHNNPHGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVPIARP 177

Query: 692  TLYQLAKVMIEKMGYEVKLARVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAV 513
            T+YQ+ K MI+KMGYEVKL RVTKRVHEAYFAQL+LSKIG ET+ +SFDLRPSDAINIAV
Sbjct: 178  TMYQVVKEMIDKMGYEVKLVRVTKRVHEAYFAQLYLSKIGCETDCLSFDLRPSDAINIAV 237

Query: 512  RCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRN 333
            RC+VPIQVNKYLA+SDGMR++E  KL+T+   +DGLLF+ LDRP G+PCVE KEF+LVRN
Sbjct: 238  RCQVPIQVNKYLAFSDGMRVVESGKLSTQALATDGLLFTELDRPSGQPCVEAKEFNLVRN 297

Query: 332  MLIAAVEERYRDAAQLRDKLSQLRSKK 252
            MLIAAVEERYRDAAQ RDKL+ LR+++
Sbjct: 298  MLIAAVEERYRDAAQWRDKLNLLRARR 324


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