BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001501
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 ...   503   e-140
ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi...   498   e-138
ref|XP_002511411.1| protein binding protein, putative [Ricinus c...   496   e-138
ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...   487   e-135
ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...   474   e-131

>ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
          Length = 381

 Score =  503 bits (1296), Expect = e-140
 Identities = 240/311 (77%), Positives = 255/311 (81%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3   GMGLDLGWQQRYARFCGRXXXXXXXXXXXYPFLWAWTVIGTLWFTSARGCLPEEGQKWGF 182
           GMGLD GWQQRYARFCGR           YPFLWAWTVIGTLWFT AR CLPEEGQKWGF
Sbjct: 67  GMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEEGQKWGF 126

Query: 183 LIWLLFSYCGLVCIACLCTGKWLTRREAHLQRAQQGIPVSEFGVLVDMIRVPDWAFEAAG 362
           LIWLLFSYCGL+CIAC+  GKW +RR+AHL RAQQGIPVSE+GVLVDMIRVPDWAFEAAG
Sbjct: 127 LIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAG 186

Query: 363 QEMRGMGQDAAVYHPGLYLTTTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFSEGN 542
           QEMRGMGQDAA YHPGLYLT TQREAVEALIQELPKFRLKAVPTDCSECPICLEEF  GN
Sbjct: 187 QEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGN 246

Query: 543 EVRGLPCAHNFHVECIDQWLRLNIKCPRCRCSVFPNLDLSALSNIRTDSGRSSATVMTTT 722
           EVRGLPCAHNFHVECID+WLRLN+KCPRCRCSVFPNLDLSAL++ R DS RSSA+V+T T
Sbjct: 247 EVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFRADSERSSASVVTAT 306

Query: 723 RYVRAQPLGHSYLLRLQGLLRPIRTENFVEDNDTDNALDAAEN-GLAVTQSHANTAESAP 899
           RYVR QP    Y+LRLQG LRP+RTEN    ND DNAL+ AEN GL V        E AP
Sbjct: 307 RYVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVVTDDLTNTEPAP 366

Query: 900 ATTSVRVDQSS 932
               V V  S+
Sbjct: 367 FDNGVLVHHST 377


>ref|XP_003608971.1| RING finger protein [Medicago truncatula]
           gi|355510026|gb|AES91168.1| RING finger protein
           [Medicago truncatula]
          Length = 365

 Score =  498 bits (1282), Expect = e-138
 Identities = 236/312 (75%), Positives = 256/312 (82%)
 Frame = +3

Query: 3   GMGLDLGWQQRYARFCGRXXXXXXXXXXXYPFLWAWTVIGTLWFTSARGCLPEEGQKWGF 182
           GMGLD GWQQRYARFCGR           YPFLWAWT+IGT+WF+SA+ CLPEEGQKWGF
Sbjct: 50  GMGLDFGWQQRYARFCGRVVVLSILGLLLYPFLWAWTIIGTMWFSSAKSCLPEEGQKWGF 109

Query: 183 LIWLLFSYCGLVCIACLCTGKWLTRREAHLQRAQQGIPVSEFGVLVDMIRVPDWAFEAAG 362
           LIWLLFSYCGL+CIAC+  GKWLTRR+AHL RAQQGIP+SE+G+LVDMIRVPDWAFEAAG
Sbjct: 110 LIWLLFSYCGLLCIACMSVGKWLTRRQAHLVRAQQGIPLSEYGILVDMIRVPDWAFEAAG 169

Query: 363 QEMRGMGQDAAVYHPGLYLTTTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFSEGN 542
           QE RGMGQD A YHPGLYLT  QREAVEALIQELPKFRLKAVPTDCSECPICLEEF  GN
Sbjct: 170 QETRGMGQDTASYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFRVGN 229

Query: 543 EVRGLPCAHNFHVECIDQWLRLNIKCPRCRCSVFPNLDLSALSNIRTDSGRSSATVMTTT 722
           EVRGLPCAHNFHVECID+WLRLN+KCPRCRCSVFPNLDLSALSN+R DS RSS +V+TTT
Sbjct: 230 EVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTTT 289

Query: 723 RYVRAQPLGHSYLLRLQGLLRPIRTENFVEDNDTDNALDAAENGLAVTQSHANTAESAPA 902
           RYVR QP   SYLLRLQGLLRP+RTE      DTDNAL  AENG+A   +   T +S   
Sbjct: 290 RYVRGQPSSQSYLLRLQGLLRPVRTEIAGPVGDTDNALQNAENGVAPVLTTKCTKQSPGL 349

Query: 903 TTSVRVDQSSRC 938
              +   QS  C
Sbjct: 350 VGGMHACQSFFC 361


>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
           gi|223550526|gb|EEF52013.1| protein binding protein,
           putative [Ricinus communis]
          Length = 381

 Score =  496 bits (1277), Expect = e-138
 Identities = 236/311 (75%), Positives = 254/311 (81%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3   GMGLDLGWQQRYARFCGRXXXXXXXXXXXYPFLWAWTVIGTLWFTSARGCLPEEGQKWGF 182
           GMGLD GWQQRYARFCGR           YPFLWAWT+IGTLWFTSAR CLPEEGQKWGF
Sbjct: 67  GMGLDFGWQQRYARFCGRIAVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQKWGF 126

Query: 183 LIWLLFSYCGLVCIACLCTGKWLTRREAHLQRAQQGIPVSEFGVLVDMIRVPDWAFEAAG 362
           LIWL+FSYCGL+CIAC+C GKWLTRR+AHL RAQQGIP+SE+GVLVDM+RVPDWAFEAAG
Sbjct: 127 LIWLVFSYCGLLCIACMCMGKWLTRRQAHLLRAQQGIPISEYGVLVDMVRVPDWAFEAAG 186

Query: 363 QEMRGMGQDAAVYHPGLYLTTTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFSEGN 542
           QEMRGMGQDAA YHPGLYLT TQREAVEALIQELPKFRLK VPTDCSECPICLEEF  GN
Sbjct: 187 QEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKTVPTDCSECPICLEEFHVGN 246

Query: 543 EVRGLPCAHNFHVECIDQWLRLNIKCPRCRCSVFPNLDLSALSNIRTDSGRSSATVMTTT 722
           EVRGLPCAHNFHVECID+WLRLN+KCPRCRCSVFPNLDLSALSN+R D  R  A  +TT 
Sbjct: 247 EVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRADPERPPAADVTTN 306

Query: 723 RYVRAQPLGHSYLLRLQGLLRPIRTENFVEDNDTDNALDAAENGLAVTQS-HANTAESAP 899
           RYVR QP   SYLLRLQGLLRPIRTE+    +D D  L+A E+G  V  +  A   E   
Sbjct: 307 RYVRTQPSSQSYLLRLQGLLRPIRTEDAGSSSDVDVDLEAVEHGREVVATREAMVMEPVS 366

Query: 900 ATTSVRVDQSS 932
              S+ V QSS
Sbjct: 367 LVGSMLVGQSS 377


>ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 382

 Score =  487 bits (1254), Expect = e-135
 Identities = 237/316 (75%), Positives = 254/316 (80%), Gaps = 7/316 (2%)
 Frame = +3

Query: 3    GMGLDLGWQQRYARFCGRXXXXXXXXXXXYPFLWAWTVIGTLWFTSARGCLPEEGQKWGF 182
            GMGLD GWQQRYARFCGR           YPFLWAWTVIGTLWF+SA+ CLPE G KWGF
Sbjct: 67   GMGLDFGWQQRYARFCGRVVVFSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEVGTKWGF 126

Query: 183  LIWLLFSYCGLVCIACLCTGKWLTRREAHLQRAQQGIPVSEFGVLVDMIRVPDWAFEAAG 362
            LIWLLFSYCGL+CIAC+  GKWLTRR+AHL RAQQGIPVSE+GVLVDMIRVPDWAFEAAG
Sbjct: 127  LIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAG 186

Query: 363  QEMRGMGQDAAVYHPGLYLTTTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFSEGN 542
            QE RGMGQDAA YHPGLYLT  QREAVEALIQELPKFRLKAVPTDCSECPICLEEF  GN
Sbjct: 187  QETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFYVGN 246

Query: 543  EVRGLPCAHNFHVECIDQWLRLNIKCPRCRCSVFPNLDLSALSNIRTDSGRSSATVMTTT 722
            EVRGLPCAHNFHVECID+WLRLN+KCPRCRCSVFPNLDLSALSN+R +   SSA+V+TTT
Sbjct: 247  EVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRAEPEESSASVVTTT 306

Query: 723  RYVRAQPLGHSYLLRLQGLLRPIRTENFVEDNDTDNALDAAENGLA--VTQS-----HAN 881
            RYVR QP   SY LRLQGLLRP+  E      D DN L+ AENG    VTQ+     HA+
Sbjct: 307  RYVRGQPSSQSYRLRLQGLLRPVGAEIAGPVGDIDNVLENAENGSVSIVTQNASSGDHAS 366

Query: 882  TAESAPATTSVRVDQS 929
            + E  P T S    QS
Sbjct: 367  SVECMPVTVSHSSAQS 382


>ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 383

 Score =  474 bits (1219), Expect = e-131
 Identities = 227/308 (73%), Positives = 251/308 (81%), Gaps = 2/308 (0%)
 Frame = +3

Query: 3   GMGLDLGWQQRYARFCGRXXXXXXXXXXXYPFLWAWTVIGTLWFTSARGCLPEEGQKWGF 182
           GMGLD GWQQRYARFCGR           YPFLWAWTVIGTLWF+SA+ CLPE G+KWGF
Sbjct: 67  GMGLDFGWQQRYARFCGRVVVLSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEVGKKWGF 126

Query: 183 LIWLLFSYCGLVCIACLCTGKWLTRREAHLQRAQQGIPVSEFGVLVDMIRVPDWAFEAAG 362
           LIWLLFSYCGL CIAC+  GKWLTRR+AHL RAQQGIPVSE+GVLVDMIRVPDWAFEAAG
Sbjct: 127 LIWLLFSYCGLFCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAG 186

Query: 363 QEMRGMGQDAAVYHPGLYLTTTQREAVEALIQELPKFRLKAVPTDCSECPICLEEFSEGN 542
           QE RGMGQDAA YHPGLYLT  QREAVEALI ELPKFRLKAVPTDCSECPICLEEF  GN
Sbjct: 187 QETRGMGQDAAAYHPGLYLTPAQREAVEALILELPKFRLKAVPTDCSECPICLEEFYVGN 246

Query: 543 EVRGLPCAHNFHVECIDQWLRLNIKCPRCRCSVFPNLDLSALSNIRTDSGRSSATVMTTT 722
           EVRGLPCAHNFHVECID+WLRLN+KCPRCRCSVFPNLDLSALS++R +  + SA+V+TT 
Sbjct: 247 EVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSSLRAEPEQFSASVVTTA 306

Query: 723 RYVRAQPLGHSYLLRLQGLLRPIRTENFVEDNDTDNALDAAENGLA--VTQSHANTAESA 896
           RYVR QP   SY LRLQGLL P+R E      D DNAL  A+NG+   VTQ+ +++ + A
Sbjct: 307 RYVRGQPSSLSYRLRLQGLLCPVRAEIAGPVGDIDNALKNAQNGVVSIVTQNASSSGDQA 366

Query: 897 PATTSVRV 920
            +   + V
Sbjct: 367 SSVECMPV 374