BLASTX nr result
ID: Coptis25_contig00001453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001453 (460 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173... 117 3e-47 gb|ABK22320.1| unknown [Picea sitchensis] 117 1e-46 emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera] 115 2e-46 ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like... 115 2e-46 gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] 115 2e-46 >gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown [Picea sitchensis] Length = 216 Score = 117 bits (293), Expect(2) = 3e-47 Identities = 57/65 (87%), Positives = 60/65 (92%) Frame = -3 Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279 SKLQSDVLREAI+Q+ + KEK RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK Sbjct: 2 SKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61 Query: 278 MKVCM 264 MKVCM Sbjct: 62 MKVCM 66 Score = 96.7 bits (239), Expect(2) = 3e-47 Identities = 49/68 (72%), Positives = 52/68 (76%) Frame = -1 Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26 MKVCMLGDAQHVEEAEK+GLDYMDVEG K+HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 25 LLGPGLNK 2 LLGPGLNK Sbjct: 122 LLGPGLNK 129 >gb|ABK22320.1| unknown [Picea sitchensis] Length = 216 Score = 117 bits (292), Expect(2) = 1e-46 Identities = 57/65 (87%), Positives = 59/65 (90%) Frame = -3 Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279 SKLQSDVLRE ITQ+ E K+K RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK Sbjct: 2 SKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61 Query: 278 MKVCM 264 MKVCM Sbjct: 62 MKVCM 66 Score = 94.7 bits (234), Expect(2) = 1e-46 Identities = 48/68 (70%), Positives = 51/68 (75%) Frame = -1 Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26 MKVCMLGDAQH+EEAEKI LDYMDVEG K+HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 25 LLGPGLNK 2 LLGPGLNK Sbjct: 122 LLGPGLNK 129 >emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera] Length = 920 Score = 115 bits (287), Expect(2) = 2e-46 Identities = 56/65 (86%), Positives = 57/65 (87%) Frame = -3 Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279 SKLQSD LREAIT + E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK Sbjct: 787 SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 846 Query: 278 MKVCM 264 MKVCM Sbjct: 847 MKVCM 851 Score = 96.3 bits (238), Expect(2) = 2e-46 Identities = 50/68 (73%), Positives = 52/68 (76%) Frame = -1 Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26 MKVCMLGDAQHVEEAEKIGL+YMDVEG K+HAFLASEAVIKQIPR Sbjct: 847 MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 906 Query: 25 LLGPGLNK 2 LLGPGLNK Sbjct: 907 LLGPGLNK 914 >ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera] Length = 216 Score = 115 bits (287), Expect(2) = 2e-46 Identities = 56/65 (86%), Positives = 57/65 (87%) Frame = -3 Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279 SKLQSD LREAIT + E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK Sbjct: 2 SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61 Query: 278 MKVCM 264 MKVCM Sbjct: 62 MKVCM 66 Score = 96.3 bits (238), Expect(2) = 2e-46 Identities = 50/68 (73%), Positives = 52/68 (76%) Frame = -1 Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26 MKVCMLGDAQHVEEAEKIGL+YMDVEG K+HAFLASEAVIKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121 Query: 25 LLGPGLNK 2 LLGPGLNK Sbjct: 122 LLGPGLNK 129 >gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis] Length = 216 Score = 115 bits (289), Expect(2) = 2e-46 Identities = 55/65 (84%), Positives = 59/65 (90%) Frame = -3 Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279 SKLQSDVLREAI+Q+ + +EK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK Sbjct: 2 SKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61 Query: 278 MKVCM 264 MKVCM Sbjct: 62 MKVCM 66 Score = 95.1 bits (235), Expect(2) = 2e-46 Identities = 49/68 (72%), Positives = 51/68 (75%) Frame = -1 Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26 MKVCMLGDAQHVEEAEKIGLDYMDVE K+HAFLASEA+IKQIPR Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121 Query: 25 LLGPGLNK 2 LLGPGLNK Sbjct: 122 LLGPGLNK 129