BLASTX nr result

ID: Coptis25_contig00001453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001453
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR173...   117   3e-47
gb|ABK22320.1| unknown [Picea sitchensis]                             117   1e-46
emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]   115   2e-46
ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   115   2e-46
gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]             115   2e-46

>gb|ABK22290.1| unknown [Picea sitchensis] gi|148908521|gb|ABR17372.1| unknown
           [Picea sitchensis]
          Length = 216

 Score =  117 bits (293), Expect(2) = 3e-47
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = -3

Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279
           SKLQSDVLREAI+Q+  + KEK RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 278 MKVCM 264
           MKVCM
Sbjct: 62  MKVCM 66



 Score = 96.7 bits (239), Expect(2) = 3e-47
 Identities = 49/68 (72%), Positives = 52/68 (76%)
 Frame = -1

Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26
           MKVCMLGDAQHVEEAEK+GLDYMDVEG                K+HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 25  LLGPGLNK 2
           LLGPGLNK
Sbjct: 122 LLGPGLNK 129


>gb|ABK22320.1| unknown [Picea sitchensis]
          Length = 216

 Score =  117 bits (292), Expect(2) = 1e-46
 Identities = 57/65 (87%), Positives = 59/65 (90%)
 Frame = -3

Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279
           SKLQSDVLRE ITQ+  E K+K RKFTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 278 MKVCM 264
           MKVCM
Sbjct: 62  MKVCM 66



 Score = 94.7 bits (234), Expect(2) = 1e-46
 Identities = 48/68 (70%), Positives = 51/68 (75%)
 Frame = -1

Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26
           MKVCMLGDAQH+EEAEKI LDYMDVEG                K+HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 25  LLGPGLNK 2
           LLGPGLNK
Sbjct: 122 LLGPGLNK 129


>emb|CAN67239.1| hypothetical protein VITISV_004804 [Vitis vinifera]
          Length = 920

 Score =  115 bits (287), Expect(2) = 2e-46
 Identities = 56/65 (86%), Positives = 57/65 (87%)
 Frame = -3

Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279
           SKLQSD LREAIT +  E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 787 SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 846

Query: 278 MKVCM 264
           MKVCM
Sbjct: 847 MKVCM 851



 Score = 96.3 bits (238), Expect(2) = 2e-46
 Identities = 50/68 (73%), Positives = 52/68 (76%)
 Frame = -1

Query: 205  MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26
            MKVCMLGDAQHVEEAEKIGL+YMDVEG                K+HAFLASEAVIKQIPR
Sbjct: 847  MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 906

Query: 25   LLGPGLNK 2
            LLGPGLNK
Sbjct: 907  LLGPGLNK 914


>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  115 bits (287), Expect(2) = 2e-46
 Identities = 56/65 (86%), Positives = 57/65 (87%)
 Frame = -3

Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279
           SKLQSD LREAIT +  E KEK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 278 MKVCM 264
           MKVCM
Sbjct: 62  MKVCM 66



 Score = 96.3 bits (238), Expect(2) = 2e-46
 Identities = 50/68 (73%), Positives = 52/68 (76%)
 Frame = -1

Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26
           MKVCMLGDAQHVEEAEKIGL+YMDVEG                K+HAFLASEAVIKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 25  LLGPGLNK 2
           LLGPGLNK
Sbjct: 122 LLGPGLNK 129


>gb|ACF06489.1| ribosomal protein L10a [Elaeis guineensis]
          Length = 216

 Score =  115 bits (289), Expect(2) = 2e-46
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -3

Query: 458 SKLQSDVLREAITQLNKEQKEKARKFTETYELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 279
           SKLQSDVLREAI+Q+  + +EK R FTET ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 278 MKVCM 264
           MKVCM
Sbjct: 62  MKVCM 66



 Score = 95.1 bits (235), Expect(2) = 2e-46
 Identities = 49/68 (72%), Positives = 51/68 (75%)
 Frame = -1

Query: 205 MKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXKHHAFLASEAVIKQIPR 26
           MKVCMLGDAQHVEEAEKIGLDYMDVE                 K+HAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 25  LLGPGLNK 2
           LLGPGLNK
Sbjct: 122 LLGPGLNK 129


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