BLASTX nr result

ID: Coptis25_contig00001372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001372
         (2311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273552.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   828   0.0  
ref|XP_003604140.1| Phosphoglycerate dehydrogenase [Medicago tru...   824   0.0  
ref|XP_003529507.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   823   0.0  
ref|XP_003531770.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   821   0.0  
ref|XP_004140713.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   817   0.0  

>ref|XP_002273552.1| PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like
            [Vitis vinifera]
          Length = 624

 Score =  828 bits (2140), Expect = 0.0
 Identities = 439/559 (78%), Positives = 480/559 (85%), Gaps = 1/559 (0%)
 Frame = -2

Query: 2103 ITNVLNTLGTTERT-NLETTFENSKPTILVSEKLGEAGLQVLRKVANVDCSYNLSNEELC 1927
            ITNV  T+ +      L+   +  KPTILVSEKLGEAGL+VLR+   V+CSY+LS E+LC
Sbjct: 58   ITNVFKTVESPAAPPTLDPVRQVQKPTILVSEKLGEAGLEVLREFGEVECSYDLSQEDLC 117

Query: 1926 AKISLCDALIVRSGTKVTRQVFEASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXXXXX 1747
             KISLCDALIVRSGTKVTR VFEA+KGRLKVVGRAGVGIDNVDLQAATEFGCL       
Sbjct: 118  KKISLCDALIVRSGTKVTRAVFEAAKGRLKVVGRAGVGIDNVDLQAATEFGCLVVNAPTA 177

Query: 1746 XXXXXAEHGIALMSSMARNVAQADASMKAGKWERTKYVGVSLVGKTLAVMGFGKVGSEVA 1567
                 AEHGIAL+++MARNVAQADASMKAGKW+R KYVGVSLVGKTLAVMGFGKVGSEVA
Sbjct: 178  NTIAAAEHGIALLAAMARNVAQADASMKAGKWQRNKYVGVSLVGKTLAVMGFGKVGSEVA 237

Query: 1566 RRAKGLGMHVIAHDPYAPADRARAIGVDLLSFDEAISTADFISLHMPLTPTTSKILNDEN 1387
            RRAKGLGMHVIAHDPYAPADRARA GVDL+SFD AISTADFISLHMPLTPTT KI NDE 
Sbjct: 238  RRAKGLGMHVIAHDPYAPADRARAAGVDLVSFDLAISTADFISLHMPLTPTTKKIFNDET 297

Query: 1386 FAKMKKGVRIINVARGGVIDEEALVRALDNGTVAQAALDVFTVEPPPKDSKLVQHENVTV 1207
            FAK+KKGVRIINVARGGVIDE+ALVRALD+G VAQAALDVFT EPPPKDSKLVQHENVTV
Sbjct: 298  FAKVKKGVRIINVARGGVIDEDALVRALDSGAVAQAALDVFTEEPPPKDSKLVQHENVTV 357

Query: 1206 TPHLGASTKXXXXXXXXXXXXXXXXALNGELSATAVNAPMVPAEVLSELAPYVVLAEKLG 1027
            TPHLGASTK                AL GELSATAVNAPMVP EV+SEL+PYVVLAEKLG
Sbjct: 358  TPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAVNAPMVPPEVISELSPYVVLAEKLG 417

Query: 1026 RLAVQLVAGGSGIKSVKVVYTSSRDPSDLDTRLLRAMITKGIIEPISDTVVNLVNADFTA 847
            RLAVQLVAGGSGIKSVKVVY ++RDP DLDTRLLRAM+TKGIIEPIS + +NLVNADFTA
Sbjct: 418  RLAVQLVAGGSGIKSVKVVYKTARDPDDLDTRLLRAMVTKGIIEPISSSFINLVNADFTA 477

Query: 846  KQKGLRIIEERVMIDSSTDCPIDSIQVQIANVESKFASATTSDNGQINVAGKVKYGVPHL 667
            KQKGLRI EERV IDSS + P++SIQVQI+NV+SKFASA  S+N  I++ GKVK G+P L
Sbjct: 478  KQKGLRISEERVSIDSSPENPVESIQVQISNVDSKFASA-VSENEYISIEGKVKDGIPRL 536

Query: 666  TCVGSFSVDVSLEGSIILCRQVDQPGMIGSVGSILGETNVNVNFMSVGRIGLRKKAIMAI 487
            TCVGSFSVDVSLEG++ILCRQVDQPGMIG VG+ILGE NVNV+FMSVGR   R +AIMAI
Sbjct: 537  TCVGSFSVDVSLEGNLILCRQVDQPGMIGRVGNILGECNVNVSFMSVGRTVKRTRAIMAI 596

Query: 486  GVDEEPDKETLKKIGDVPA 430
            GVDEEPDK+TLKKIG+VPA
Sbjct: 597  GVDEEPDKDTLKKIGEVPA 615


>ref|XP_003604140.1| Phosphoglycerate dehydrogenase [Medicago truncatula]
            gi|355505195|gb|AES86337.1| Phosphoglycerate
            dehydrogenase [Medicago truncatula]
          Length = 630

 Score =  824 bits (2129), Expect = 0.0
 Identities = 427/562 (75%), Positives = 487/562 (86%), Gaps = 2/562 (0%)
 Frame = -2

Query: 2109 FIITNVLNTLGTTERTN--LETTFENSKPTILVSEKLGEAGLQVLRKVANVDCSYNLSNE 1936
            F++ +VL T+  T++TN  +    EN KPTILVSEKLGEAGLQVLR++ NV+C+Y+LS E
Sbjct: 61   FMVNSVLKTVDQTKQTNNVVSVNDENEKPTILVSEKLGEAGLQVLRQLGNVECAYDLSPE 120

Query: 1935 ELCAKISLCDALIVRSGTKVTRQVFEASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXX 1756
            +LC KIS CDALIVRSGTKVTR+VFEA KG+LKVVGRAGVGIDNVDLQAATEFGCL    
Sbjct: 121  DLCKKISSCDALIVRSGTKVTRKVFEAGKGKLKVVGRAGVGIDNVDLQAATEFGCLVVNA 180

Query: 1755 XXXXXXXXAEHGIALMSSMARNVAQADASMKAGKWERTKYVGVSLVGKTLAVMGFGKVGS 1576
                    AEHGIAL+++MARNV+QADAS+KAGKW R+KYVGVS+VGKTLA+MGFGKVGS
Sbjct: 181  PTANTIAAAEHGIALLAAMARNVSQADASLKAGKWLRSKYVGVSMVGKTLAIMGFGKVGS 240

Query: 1575 EVARRAKGLGMHVIAHDPYAPADRARAIGVDLLSFDEAISTADFISLHMPLTPTTSKILN 1396
            EVARRAKGLGM+VIAHDPYAPADRARA+GV+L+SFD+AI+TADFISLHMPLTPTT+K+ N
Sbjct: 241  EVARRAKGLGMNVIAHDPYAPADRARAVGVELVSFDQAITTADFISLHMPLTPTTNKVFN 300

Query: 1395 DENFAKMKKGVRIINVARGGVIDEEALVRALDNGTVAQAALDVFTVEPPPKDSKLVQHEN 1216
            D  FAKMK GVRIINVARGGVIDE+ALV+ALD+G VAQAALDVFT EPP KDSKLVQHEN
Sbjct: 301  DNTFAKMKNGVRIINVARGGVIDEDALVKALDSGIVAQAALDVFTEEPPAKDSKLVQHEN 360

Query: 1215 VTVTPHLGASTKXXXXXXXXXXXXXXXXALNGELSATAVNAPMVPAEVLSELAPYVVLAE 1036
            V  TPHLGASTK                ALNGELSATAVNAPMV  EVLSELAPYVVLAE
Sbjct: 361  VIATPHLGASTKEAQEGVAIEIAEAVVGALNGELSATAVNAPMVAPEVLSELAPYVVLAE 420

Query: 1035 KLGRLAVQLVAGGSGIKSVKVVYTSSRDPSDLDTRLLRAMITKGIIEPISDTVVNLVNAD 856
            KLGRLAVQLV+GGSGI+SVKVVY S+R P DLDTRLLRAMITKGIIEPIS+T+VNLVNAD
Sbjct: 421  KLGRLAVQLVSGGSGIQSVKVVYRSARGPDDLDTRLLRAMITKGIIEPISNTIVNLVNAD 480

Query: 855  FTAKQKGLRIIEERVMIDSSTDCPIDSIQVQIANVESKFASATTSDNGQINVAGKVKYGV 676
            + AKQKGLRI EERV++DSS + P++SIQ+QI+NVESKFASA  S+ GQI++ GKVKYG 
Sbjct: 481  YIAKQKGLRISEERVVVDSSPELPVESIQIQISNVESKFASA-VSETGQISIDGKVKYGT 539

Query: 675  PHLTCVGSFSVDVSLEGSIILCRQVDQPGMIGSVGSILGETNVNVNFMSVGRIGLRKKAI 496
            PHLTCVGSF+VDVSLEG++ILCRQ+DQPGMIG+VG+ILGE NVNV+FMSVGR   RKKA+
Sbjct: 540  PHLTCVGSFAVDVSLEGNLILCRQIDQPGMIGTVGNILGEKNVNVSFMSVGRTSRRKKAL 599

Query: 495  MAIGVDEEPDKETLKKIGDVPA 430
            MAIGVDEEP+KE L+ IG VPA
Sbjct: 600  MAIGVDEEPNKEALENIGAVPA 621


>ref|XP_003529507.1| PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like
            [Glycine max]
          Length = 623

 Score =  823 bits (2125), Expect = 0.0
 Identities = 440/614 (71%), Positives = 496/614 (80%), Gaps = 8/614 (1%)
 Frame = -2

Query: 2247 ATCSAKPTFLPRISLSNFSSSKKYTHLPFSS---VXXXXXXXXXXXXXSFIITNVLNTLG 2077
            ++   KP F    ++S  S   ++ H+ F+S   +             S ++ +VL T+ 
Sbjct: 3    SSACTKPIFPSAFTVSK-SKLSRHVHVSFTSPKPIYYHYRKLSHASQRSLVVNSVLKTVD 61

Query: 2076 TTERTNLETTFEN-----SKPTILVSEKLGEAGLQVLRKVANVDCSYNLSNEELCAKISL 1912
             T+ +   +  E+      KPTILVSEKLGEAGLQVLR V +V+C+Y LS EELC KIS 
Sbjct: 62   PTQTSLRRSNSEDVGSLGEKPTILVSEKLGEAGLQVLRGVGHVECAYELSQEELCTKISC 121

Query: 1911 CDALIVRSGTKVTRQVFEASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXXXXXXXXXX 1732
            CDALIVRSGTKVTR+VFEA KGRLKVVGRAGVGIDNVDLQAATEFGCL            
Sbjct: 122  CDALIVRSGTKVTREVFEAGKGRLKVVGRAGVGIDNVDLQAATEFGCLVVNAPTANTIAA 181

Query: 1731 AEHGIALMSSMARNVAQADASMKAGKWERTKYVGVSLVGKTLAVMGFGKVGSEVARRAKG 1552
            AEHGIAL+++MARNVAQADAS KAGKW+R+KYVGVS+VGKTLAVMGFGKVGSEVARRAKG
Sbjct: 182  AEHGIALLAAMARNVAQADASTKAGKWQRSKYVGVSMVGKTLAVMGFGKVGSEVARRAKG 241

Query: 1551 LGMHVIAHDPYAPADRARAIGVDLLSFDEAISTADFISLHMPLTPTTSKILNDENFAKMK 1372
            LGMHVIAHDPYAPADRARAIGVDL+SFD AI+TADFISLHMPLTPTT+KI ND  FAKMK
Sbjct: 242  LGMHVIAHDPYAPADRARAIGVDLVSFDHAIATADFISLHMPLTPTTNKIFNDNTFAKMK 301

Query: 1371 KGVRIINVARGGVIDEEALVRALDNGTVAQAALDVFTVEPPPKDSKLVQHENVTVTPHLG 1192
            KGVRI+NVARGGVIDE+ALVRALD G VAQAALDVFT EPP KDSKLVQHENVTVTPHLG
Sbjct: 302  KGVRIVNVARGGVIDEDALVRALDTGIVAQAALDVFTEEPPSKDSKLVQHENVTVTPHLG 361

Query: 1191 ASTKXXXXXXXXXXXXXXXXALNGELSATAVNAPMVPAEVLSELAPYVVLAEKLGRLAVQ 1012
            ASTK                AL GELSATAVNAPMV  EVLSELAPYVVLAEKLGRLAVQ
Sbjct: 362  ASTKEAQEGVAIEIAEAVLGALKGELSATAVNAPMVAPEVLSELAPYVVLAEKLGRLAVQ 421

Query: 1011 LVAGGSGIKSVKVVYTSSRDPSDLDTRLLRAMITKGIIEPISDTVVNLVNADFTAKQKGL 832
            LV GGSGIKSVK+VY S+R P DLDTRLLRAM+TKG+IEPIS+T+VNLVNADF AKQKGL
Sbjct: 422  LVCGGSGIKSVKIVYRSARGPDDLDTRLLRAMVTKGLIEPISNTIVNLVNADFIAKQKGL 481

Query: 831  RIIEERVMIDSSTDCPIDSIQVQIANVESKFASATTSDNGQINVAGKVKYGVPHLTCVGS 652
            RI EERV++DSS + P+DSIQVQI++V+SKFASA  S++GQI++ G+VK+G PHLTCVGS
Sbjct: 482  RISEERVVVDSSPEMPVDSIQVQISSVDSKFASA-VSESGQISIDGRVKFGEPHLTCVGS 540

Query: 651  FSVDVSLEGSIILCRQVDQPGMIGSVGSILGETNVNVNFMSVGRIGLRKKAIMAIGVDEE 472
            F VDVSLEG++ILCRQVDQPGMIG VG+ILGE NVNV+FMSVGR   R KAIMAIGVDEE
Sbjct: 541  FDVDVSLEGNLILCRQVDQPGMIGRVGNILGEQNVNVSFMSVGRTSRRNKAIMAIGVDEE 600

Query: 471  PDKETLKKIGDVPA 430
            P+KE L  IG VPA
Sbjct: 601  PNKEALDNIGAVPA 614


>ref|XP_003531770.1| PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like
            [Glycine max]
          Length = 621

 Score =  821 bits (2120), Expect = 0.0
 Identities = 443/611 (72%), Positives = 496/611 (81%), Gaps = 8/611 (1%)
 Frame = -2

Query: 2238 SAKPTFLPRISLSNFSSSK--KYTHLPF-SSVXXXXXXXXXXXXXSFIITNVLNTLGTTE 2068
            S++    P I LS F+ SK     H+ F ++              S ++ NVL T+  TE
Sbjct: 3    SSRACTKPIIFLSAFTKSKFSHQYHVSFINTTSHIPIYPKLSQQRSLVVNNVLKTVEPTE 62

Query: 2067 RTNLETTFEN-----SKPTILVSEKLGEAGLQVLRKVANVDCSYNLSNEELCAKISLCDA 1903
             +   +  E       KPTILVSE+LGEAGLQVLR V +V+C+Y LS EELC KIS CDA
Sbjct: 63   SSLRSSNSEEFGSLGEKPTILVSERLGEAGLQVLRGVGHVECAYELSQEELCTKISCCDA 122

Query: 1902 LIVRSGTKVTRQVFEASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXXXXXXXXXXAEH 1723
            LIVRSGTKVTR+VFEA+KGRLKVVGRAGVGIDNVDLQAATEFGCL            AEH
Sbjct: 123  LIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEFGCLVVNAPTANTIAAAEH 182

Query: 1722 GIALMSSMARNVAQADASMKAGKWERTKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM 1543
            GIAL+++MARNVAQADAS KAGKW+R+KYVGVS+VGKTLAVMGFGKVGSEVARRAKGLGM
Sbjct: 183  GIALLAAMARNVAQADASTKAGKWQRSKYVGVSMVGKTLAVMGFGKVGSEVARRAKGLGM 242

Query: 1542 HVIAHDPYAPADRARAIGVDLLSFDEAISTADFISLHMPLTPTTSKILNDENFAKMKKGV 1363
            HVIAHDPYAPADRARAIGVDL+SFD+AI+TADFISLHMPLTPTT+KI ND  FAKMKKGV
Sbjct: 243  HVIAHDPYAPADRARAIGVDLVSFDQAITTADFISLHMPLTPTTNKIFNDNTFAKMKKGV 302

Query: 1362 RIINVARGGVIDEEALVRALDNGTVAQAALDVFTVEPPPKDSKLVQHENVTVTPHLGAST 1183
            RI+NVARGGVIDE+ALVRALD+G VAQAALDVFT EPP KDSKLVQHENVTVTPHLGAST
Sbjct: 303  RIVNVARGGVIDEDALVRALDSGIVAQAALDVFTEEPPSKDSKLVQHENVTVTPHLGAST 362

Query: 1182 KXXXXXXXXXXXXXXXXALNGELSATAVNAPMVPAEVLSELAPYVVLAEKLGRLAVQLVA 1003
            K                AL GELSATAVNAPMV  EVLSELAPYVVLAEKLGRLAVQLV 
Sbjct: 363  KEAQEGVAIEIAEAVLGALKGELSATAVNAPMVAPEVLSELAPYVVLAEKLGRLAVQLVC 422

Query: 1002 GGSGIKSVKVVYTSSRDPSDLDTRLLRAMITKGIIEPISDTVVNLVNADFTAKQKGLRII 823
            GGSGIKSVKVVY S+R P DLDTRLLRAM+TKG+IEPIS+T+VNLVNADF AKQKGLRI 
Sbjct: 423  GGSGIKSVKVVYRSARGPDDLDTRLLRAMVTKGLIEPISNTIVNLVNADFIAKQKGLRIS 482

Query: 822  EERVMIDSSTDCPIDSIQVQIANVESKFASATTSDNGQINVAGKVKYGVPHLTCVGSFSV 643
            EERV++DSS + P+DSIQVQI++V+SKFASA  S++GQI++ G+VK+G PHLTCVGSF V
Sbjct: 483  EERVVVDSSPELPVDSIQVQISSVDSKFASA-VSESGQISIDGRVKFGEPHLTCVGSFDV 541

Query: 642  DVSLEGSIILCRQVDQPGMIGSVGSILGETNVNVNFMSVGRIGLRKKAIMAIGVDEEPDK 463
            DVSLEG++ILCRQVDQPGMIG VG+ILGE NVNV+FMSVGR   R KAIMAIGVDEEP+K
Sbjct: 542  DVSLEGNLILCRQVDQPGMIGRVGNILGEQNVNVSFMSVGRTSRRNKAIMAIGVDEEPNK 601

Query: 462  ETLKKIGDVPA 430
            E L  IG V A
Sbjct: 602  EALDNIGAVSA 612


>ref|XP_004140713.1| PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like
            [Cucumis sativus] gi|449501685|ref|XP_004161437.1|
            PREDICTED: d-3-phosphoglycerate dehydrogenase,
            chloroplastic-like [Cucumis sativus]
          Length = 599

 Score =  817 bits (2110), Expect = 0.0
 Identities = 429/537 (79%), Positives = 468/537 (87%)
 Frame = -2

Query: 2040 NSKPTILVSEKLGEAGLQVLRKVANVDCSYNLSNEELCAKISLCDALIVRSGTKVTRQVF 1861
            N+KPT+LV+EKLGEAGL +L++ ANVDCSYNLS EELC KISLCDALIVRSGTKV+R+VF
Sbjct: 55   NAKPTVLVAEKLGEAGLDLLKEFANVDCSYNLSPEELCTKISLCDALIVRSGTKVSREVF 114

Query: 1860 EASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXXXXXXXXXXAEHGIALMSSMARNVAQ 1681
            E+S GRLKVVGRAGVGIDNVDL AATE GCL            AEHGIAL+++MARNVAQ
Sbjct: 115  ESSGGRLKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMARNVAQ 174

Query: 1680 ADASMKAGKWERTKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRA 1501
            ADAS+KAGKW+R KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRA
Sbjct: 175  ADASVKAGKWQRNKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRA 234

Query: 1500 RAIGVDLLSFDEAISTADFISLHMPLTPTTSKILNDENFAKMKKGVRIINVARGGVIDEE 1321
            RAIGV+L+ F+EAI+TADFISLHMPLTP TSKILNDENFAKMKKGVRI+NVARGGVIDEE
Sbjct: 235  RAIGVELVGFEEAIATADFISLHMPLTPATSKILNDENFAKMKKGVRIVNVARGGVIDEE 294

Query: 1320 ALVRALDNGTVAQAALDVFTVEPPPKDSKLVQHENVTVTPHLGASTKXXXXXXXXXXXXX 1141
            ALVRALD G VAQAALDVFTVEPPPKDSKL+QHENVTVTPHLGAST              
Sbjct: 295  ALVRALDAGIVAQAALDVFTVEPPPKDSKLIQHENVTVTPHLGASTMEAQEGVAVEIAEA 354

Query: 1140 XXXALNGELSATAVNAPMVPAEVLSELAPYVVLAEKLGRLAVQLVAGGSGIKSVKVVYTS 961
               AL GEL+ATAVNAPMVPAEVL+EL P+V LAEKLGRLAVQLVAGGSG+K+VKV Y S
Sbjct: 355  VVGALKGELAATAVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVTYAS 414

Query: 960  SRDPSDLDTRLLRAMITKGIIEPISDTVVNLVNADFTAKQKGLRIIEERVMIDSSTDCPI 781
            SR P DLDTRLLRAMITKG+IEPIS   VNLVNADFTAKQ+GLRI EERV+ID S + P+
Sbjct: 415  SRAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGLRITEERVIIDGSPEKPL 474

Query: 780  DSIQVQIANVESKFASATTSDNGQINVAGKVKYGVPHLTCVGSFSVDVSLEGSIILCRQV 601
            + IQVQIANVESKFASA  SD+G+I V G VK GVPHLT VGSF VDVSLEGSIILCRQV
Sbjct: 475  EYIQVQIANVESKFASA-ISDSGEIKVEGLVKDGVPHLTKVGSFEVDVSLEGSIILCRQV 533

Query: 600  DQPGMIGSVGSILGETNVNVNFMSVGRIGLRKKAIMAIGVDEEPDKETLKKIGDVPA 430
            DQPGMIG VGSILGE NVNV+FMSVGRI  RK+A+MAIGVDE+P KE+LK+IGDVPA
Sbjct: 534  DQPGMIGKVGSILGEENVNVSFMSVGRIAPRKQAVMAIGVDEQPSKESLKRIGDVPA 590


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