BLASTX nr result

ID: Coptis25_contig00001343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001343
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|2...   344   5e-92
ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266...   337   8e-90
ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|2...   333   1e-88
ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycin...   321   3e-85
ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycin...   319   1e-84

>ref|XP_002326533.1| predicted protein [Populus trichocarpa] gi|222833855|gb|EEE72332.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score =  344 bits (882), Expect = 5e-92
 Identities = 213/472 (45%), Positives = 266/472 (56%), Gaps = 27/472 (5%)
 Frame = +3

Query: 126  QQNDSSPSDDIFKSLFGA--QAPESQGLGLHLTPI------PKNTEQESNKKKREKSNLE 281
            Q + +S   D+F++LF    Q   +  L     P       PK+ E  S     +K N  
Sbjct: 15   QNHTASALSDVFQTLFSGADQTASTSSLFSDSNPFKRKPEDPKSNENPSTDVDTQKPNFY 74

Query: 282  E--DKSEKTKRKKADV-FD--NXXXXXXXXXXXXXXXXXXYEAKAY-----NADVEIIIS 431
            E  +K +K K +  ++ F+                     YEAK Y     N +   ++ 
Sbjct: 75   ETTEKLKKVKTENPNLGFEPKEEETLRGRKKRKRDDLEREYEAKKYGPVVDNEENASVVV 134

Query: 432  XXXXXXXXXXXDDVISKEEQGYDDEDKLLRTVFVGNLPXXXXXXXXXXEFSKFGDVESVR 611
                       D ++SKE +G+DDE KLLRTVFVGNLP          EFSKFGDVESVR
Sbjct: 135  GAKRKNTDDAADVLVSKESEGFDDESKLLRTVFVGNLPLKVKKKTLIKEFSKFGDVESVR 194

Query: 612  IRSVPIVDSKTPRKGAIMKGKINESVDSVHAYIVFKDEKSAQASLSHNMAMLGGNHIRVD 791
            IRSVPI +SK PRKGAI+  K N++VDSVHAY+VFK+E+SA+ASLSHNMA++GGNHIRVD
Sbjct: 195  IRSVPIAESKIPRKGAILLKKFNDNVDSVHAYVVFKNEQSAEASLSHNMAVVGGNHIRVD 254

Query: 792  NACPPRKKLKADSAPVYDNKRTVFVGNLPFDVKDEEIYQLLCGIKQIESDIEGVRVIRDP 971
             ACPPRKKLK   AP+YDNKRTVFVGNLPFDVKDEE+YQL  GIK + S IE VRVIRDP
Sbjct: 255  RACPPRKKLKGSDAPLYDNKRTVFVGNLPFDVKDEELYQLFTGIKDLASSIEAVRVIRDP 314

Query: 972  NSSVGKGIAYVLFKTMEAANFIIXXXXXXXXXXXXXXYHAKADSTPSKKRNLPMPSADNS 1151
            +  +GKGIAYVLFKT EAAN +I               HA+ DSTPSK++N       NS
Sbjct: 315  HVGLGKGIAYVLFKTREAANLVIKKRNLKLRDRELRLSHARQDSTPSKRKNSFAEETANS 374

Query: 1152 NGKRLAVAPRENHSDKNKTKNKPVLSYQGLKASKSIQKKETR-----KKEFSPANEA--- 1307
              KRLA   R  + + N+   K   SYQGL+ASKS  +K+       K++ +P  ++   
Sbjct: 375  PNKRLAPDSRAPYHN-NRPDRKAAKSYQGLRASKSGVEKKVHAPAHSKRDVAPKMKSKPR 433

Query: 1308 -EVKQHXXXXXXXXXXXXXXXXXXXXSRPTGLKRKPEGRTPDSFHRNKKARK 1460
             E  Q                       P   KRK + RTPDS +R KKARK
Sbjct: 434  EEKHQGKRPAVAKRKAKATALKDGGALEPARQKRKLDSRTPDSSNRKKKARK 485


>ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
          Length = 541

 Score =  337 bits (863), Expect = 8e-90
 Identities = 198/419 (47%), Positives = 253/419 (60%), Gaps = 14/419 (3%)
 Frame = +3

Query: 246  SNKKKREKSNLEEDKSEKTKRKKADVFDNXXXXXXXXXXXXXXXXXXYEAKAYNADVEII 425
            S  + +E  + E+ K +K K++K D  +                   YEA+ Y    ++ 
Sbjct: 140  SGSEVKEMVDSEKGKEKKKKKRKRDEIEEE-----------------YEAQHYGTVAKVE 182

Query: 426  ISXXXXXXXXXXXDDVISKEEQGYDDEDKLLRTVFVGNLPXXXXXXXXXXEFSKFGDVES 605
                         + ++SKE  G+DDE KLLRTVFVGNLP          EFS FG+V+S
Sbjct: 183  GVGEKRKSVVNPAEMLVSKE--GFDDESKLLRTVFVGNLPLKIKKKALLKEFSVFGEVQS 240

Query: 606  VRIRSVPIVDSKTPRKGAIMKGKINESVDSVHAYIVFKDEKSAQASLSHNMAMLGGNHIR 785
            VRIRSVPI+DSK PRKGAI+  KIN+SVDSVHAYIVFK E+SAQ SLSHNM+++GGNHIR
Sbjct: 241  VRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIVFKTEESAQTSLSHNMSVIGGNHIR 300

Query: 786  VDNACPPRKKLKADS-APVYDNKRTVFVGNLPFDVKDEEIYQLLCGIKQIESDIEGVRVI 962
            VD ACPPRKKLK ++ A +YDNKRTVFVGNLPFDVK EEIYQL CGI  +ES IE VRV+
Sbjct: 301  VDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVKAEEIYQLFCGIDSLESSIEAVRVV 360

Query: 963  RDPNSSVGKGIAYVLFKTMEAANFIIXXXXXXXXXXXXXXYHAKADS-TPSKKRNLPMPS 1139
            R+P++SVGKGIAY+LFKT +AAN ++              YHAK  S TPSK+RN     
Sbjct: 361  RNPHTSVGKGIAYILFKTKDAANLVVKKRNLKLRDRDLRLYHAKPSSTTPSKRRNPTPAE 420

Query: 1140 ADNSNGKRLAVAPRENHSDKNKTKNKPVLSYQGLKASKS-------IQKKE-----TRKK 1283
            AD S  K+LA   R +    N+ K K V+SYQGL+ASKS       +Q KE     ++ +
Sbjct: 421  ADISPAKKLASGSRISLESSNRLKTKSVISYQGLQASKSGVPKKGRLQTKEAVKFKSKNQ 480

Query: 1284 EFSPANEAEVKQHXXXXXXXXXXXXXXXXXXXXSRPTGLKRKPEGRTPDSFHRNKKARK 1460
            + +   E + K+                     S+ TG KRK E +TP+   R+KKA+K
Sbjct: 481  KENTLKEQQKKRPAVAARKAKINAVNAAGGGGGSKQTGKKRKLESQTPEGGRRSKKAKK 539


>ref|XP_002303427.1| predicted protein [Populus trichocarpa] gi|222840859|gb|EEE78406.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  333 bits (853), Expect = 1e-88
 Identities = 207/465 (44%), Positives = 253/465 (54%), Gaps = 18/465 (3%)
 Frame = +3

Query: 120  PEQQNDSSPSDDIFKSLFGAQAPESQGLGLHLTPIPKNTEQESNKKKREKSNLEEDKSEK 299
            P+   + S + DI       Q P   G  + L  +         + K EK+ L E   ++
Sbjct: 56   PKSNENPSANADI-------QDPNFNGTAMKLKKVKTQNPNLGLEPKEEKT-LNESGRKR 107

Query: 300  TKRKKADVFDNXXXXXXXXXXXXXXXXXXYEAKAY-----NADVEIIISXXXXXXXXXXX 464
             KRK+ D+                     YEAK Y     N +   ++            
Sbjct: 108  KKRKRDDLESE------------------YEAKKYGPVVNNEENVRVVVGAKRKKADDAA 149

Query: 465  DDVISKEEQGYDDEDKLLRTVFVGNLPXXXXXXXXXXEFSKFGDVESVRIRSVPIVDSKT 644
            D ++SKE +G+DDE KLLRTVFVGNLP          EFSKFG+VES+RIRS+PI +SK 
Sbjct: 150  DVLVSKEGEGFDDERKLLRTVFVGNLPLKVKKKALIKEFSKFGEVESLRIRSMPITESKI 209

Query: 645  PRKGAIMKGKINESVDSVHAYIVFKDEKSAQASLSHNMAMLGGNHIRVDNACPPRKKLKA 824
            PRKGAI+  K N++ DSVHAYIVF  E+SA+ASL+HNMA++GGNHIRVD ACPPRKKLK 
Sbjct: 210  PRKGAILLKKFNDNADSVHAYIVFNTEQSAEASLTHNMAVVGGNHIRVDRACPPRKKLKG 269

Query: 825  DSAPVYDNKRTVFVGNLPFDVKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYV 1004
              AP+YDNKRTVFVGNLPFDVKDEEIYQL  GIK + S IE VRVIR P+  +GKGIAYV
Sbjct: 270  SDAPLYDNKRTVFVGNLPFDVKDEEIYQLFTGIKDLASSIEAVRVIRHPHIGLGKGIAYV 329

Query: 1005 LFKTMEAANFIIXXXXXXXXXXXXXXYHAKADSTPSKKRNLPMPSADNSNGKRLAVAPRE 1184
            LFKT EAAN +I               HA+ DSTPSK+RN       N + K+LA   R 
Sbjct: 330  LFKTREAANLVIKKRNLKLRDRELRASHARQDSTPSKRRNSFAGETANLSNKKLATDSR- 388

Query: 1185 NHSDKNKTKNKPVLSYQGLKASKSIQKKETRKKEFSPAN-------------EAEVKQHX 1325
                 N+   K   SYQGL+ASKS       KK  +PAN             + E +Q  
Sbjct: 389  TPDRNNRPDTKAAKSYQGLRASKS----GIEKKVHAPANAKRNGTAKVKSKTQREKRQEK 444

Query: 1326 XXXXXXXXXXXXXXXXXXXSRPTGLKRKPEGRTPDSFHRNKKARK 1460
                               S P   KRK + RTPDS +R KKARK
Sbjct: 445  RPAVALRKAKATALKDGGASGPARQKRKLDSRTPDSSNRKKKARK 489


>ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 519

 Score =  321 bits (823), Expect = 3e-85
 Identities = 180/348 (51%), Positives = 220/348 (63%), Gaps = 16/348 (4%)
 Frame = +3

Query: 465  DDVISKEEQGYDDEDKLLRTVFVGNLPXXXXXXXXXXEFSKFGDVESVRIRSVPIVDSKT 644
            D ++SKE  G+DDEDKLLRTVFVGNLP          EF KFG+VESVRIRSVPI D+K 
Sbjct: 177  DMMVSKE--GFDDEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKK 234

Query: 645  PRKGAIMKGKINESVDSVHAYIVFKDEKSAQASLSHNMAMLGGNHIRVDNACPPRKKLKA 824
            PRKGAI+  KIN++ DSVHAYIVFK E+SAQASLSHNM+++ GNHIRVD ACPPRKK K 
Sbjct: 235  PRKGAILAKKINDAADSVHAYIVFKTEQSAQASLSHNMSLVEGNHIRVDRACPPRKKHKG 294

Query: 825  DSAPVYDNKRTVFVGNLPFDVKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYV 1004
            +S P+YD+KRTVFVGNLPFDVKDEE+YQL CGI  +ES IE VRV+RDP+ +VGKGIAYV
Sbjct: 295  ESTPLYDDKRTVFVGNLPFDVKDEELYQLFCGISNLESSIEAVRVVRDPHLNVGKGIAYV 354

Query: 1005 LFKTMEAANFIIXXXXXXXXXXXXXXYHAKADSTPSK--------------KRNLPMPSA 1142
            LFKT EAA F++               HAK D+TPSK              KR  P+  A
Sbjct: 355  LFKTKEAAKFVVKKRNLKLRDRELRLSHAKVDATPSKRPNPSSAHAPSTPAKRPYPLAHA 414

Query: 1143 DNSNGKRLAVAPRENHSDKN--KTKNKPVLSYQGLKASKSIQKKETRKKEFSPANEAEVK 1316
             ++  K  +VA R   S  N  K+  K   SYQGL+A+KS   K+ +  E     + + +
Sbjct: 415  PSTPAKEFSVASRSPSSSNNMSKSNRKTNASYQGLRATKSDVHKKIQGGE-----KPKER 469

Query: 1317 QHXXXXXXXXXXXXXXXXXXXXSRPTGLKRKPEGRTPDSFHRNKKARK 1460
                                   +  G+KRK + RTPDS  RN+K +K
Sbjct: 470  MTKRPSVAARKAKAKLGKESDLPKQAGMKRKLDSRTPDSTLRNRKVKK 517


>ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
          Length = 515

 Score =  319 bits (818), Expect = 1e-84
 Identities = 178/348 (51%), Positives = 222/348 (63%), Gaps = 16/348 (4%)
 Frame = +3

Query: 465  DDVISKEEQGYDDEDKLLRTVFVGNLPXXXXXXXXXXEFSKFGDVESVRIRSVPIVDSKT 644
            D ++SKE  G+D+EDKLLRTVFVGNLP          EF KFG+VESVRIRSVPI D+K 
Sbjct: 173  DMMVSKE--GFDNEDKLLRTVFVGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPIQDTKK 230

Query: 645  PRKGAIMKGKINESVDSVHAYIVFKDEKSAQASLSHNMAMLGGNHIRVDNACPPRKKLKA 824
            PRKGAI+  KIN++ DSVHAYIVFK E+SAQASL+HNM+++ GNHIRVD ACPPRKK K 
Sbjct: 231  PRKGAILAKKINDAADSVHAYIVFKTEQSAQASLAHNMSLVEGNHIRVDRACPPRKKHKG 290

Query: 825  DSAPVYDNKRTVFVGNLPFDVKDEEIYQLLCGIKQIESDIEGVRVIRDPNSSVGKGIAYV 1004
            +S P+YDNKRTVFVGNLPFDVKDEE+Y+L CGI  +ES IE +RV+RDP+ +VGKGIAYV
Sbjct: 291  ESTPLYDNKRTVFVGNLPFDVKDEELYKLFCGISNLESSIEAIRVVRDPHLNVGKGIAYV 350

Query: 1005 LFKTMEAANFIIXXXXXXXXXXXXXXYHAKADSTPSK--------------KRNLPMPSA 1142
            LFKT EAA F++               HAKAD+TPSK              KR  P   A
Sbjct: 351  LFKTKEAAKFVVKKRNLKLRDRELRLCHAKADATPSKRPNPSSAHAPSTPAKRPNPSAHA 410

Query: 1143 DNSNGKRLAVAPRENHSDKN--KTKNKPVLSYQGLKASKSIQKKETRKKEFSPANEAEVK 1316
             ++  K+ +VA R   S  N  K+  K   SYQGL+A+KS   K+ +  E     + + +
Sbjct: 411  PSTPAKKFSVASRSPSSSNNMSKSNRKTNTSYQGLRATKSDVHKKIQGGE-----KPKER 465

Query: 1317 QHXXXXXXXXXXXXXXXXXXXXSRPTGLKRKPEGRTPDSFHRNKKARK 1460
            +                      +  G+KRK + RTPDS  RN+K +K
Sbjct: 466  KTKRPSVAARKAKANLVKQSDLPKQAGMKRKVDSRTPDSTLRNRKVKK 513


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