BLASTX nr result

ID: Coptis25_contig00001245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001245
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis...   347   4e-93
gb|AEA92307.1| Rab3 [Hevea brasiliensis]                              343   3e-92
gb|AEA92304.1| Rab2 [Hevea brasiliensis]                              343   3e-92
ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [...   342   8e-92
gb|ADL59582.1| Rab1 [Hevea brasiliensis]                              342   8e-92

>ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
           gi|296086273|emb|CBI31714.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  347 bits (889), Expect = 4e-93
 Identities = 177/202 (87%), Positives = 183/202 (90%)
 Frame = -1

Query: 957 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 778
           LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 777 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 598
           ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK+LVGNKADMDE
Sbjct: 75  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKADMDE 134

Query: 597 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAETDSRAEPQTIK 418
           SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLAETDS+AEPQTIK
Sbjct: 135 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKAEPQTIK 194

Query: 417 ISQPDQASGSGQAPQKSACCGT 352
           I+QPDQA+  GQAPQKSACCG+
Sbjct: 195 INQPDQAANGGQAPQKSACCGS 216


>gb|AEA92307.1| Rab3 [Hevea brasiliensis]
          Length = 216

 Score =  343 bits (881), Expect = 3e-92
 Identities = 177/202 (87%), Positives = 182/202 (90%)
 Frame = -1

Query: 957 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 778
           LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 777 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 598
           ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE
Sbjct: 75  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 134

Query: 597 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAETDSRAEPQTIK 418
           SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK+RLAETDS+AEPQTIK
Sbjct: 135 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLAETDSKAEPQTIK 194

Query: 417 ISQPDQASGSGQAPQKSACCGT 352
           I+QPDQA+  GQA QKSACCG+
Sbjct: 195 INQPDQAASGGQAAQKSACCGS 216


>gb|AEA92304.1| Rab2 [Hevea brasiliensis]
          Length = 216

 Score =  343 bits (881), Expect = 3e-92
 Identities = 177/202 (87%), Positives = 182/202 (90%)
 Frame = -1

Query: 957 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 778
           LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 777 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 598
           ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE
Sbjct: 75  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 134

Query: 597 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAETDSRAEPQTIK 418
           SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA+TDS+AEP TIK
Sbjct: 135 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPTTIK 194

Query: 417 ISQPDQASGSGQAPQKSACCGT 352
           I+QPDQA G+GQA QKSACCG+
Sbjct: 195 INQPDQAGGAGQAGQKSACCGS 216


>ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
           gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related
           protein RABE1c-like [Cucumis sativus]
          Length = 216

 Score =  342 bits (878), Expect = 8e-92
 Identities = 176/202 (87%), Positives = 182/202 (90%)
 Frame = -1

Query: 957 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 778
           LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 777 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 598
           ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE
Sbjct: 75  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 134

Query: 597 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAETDSRAEPQTIK 418
           SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA+TDS+AEPQTIK
Sbjct: 135 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIK 194

Query: 417 ISQPDQASGSGQAPQKSACCGT 352
           I++PD A+G GQA QKSACCG+
Sbjct: 195 INKPDAAAGDGQAAQKSACCGS 216


>gb|ADL59582.1| Rab1 [Hevea brasiliensis]
          Length = 216

 Score =  342 bits (878), Expect = 8e-92
 Identities = 176/202 (87%), Positives = 182/202 (90%)
 Frame = -1

Query: 957 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 778
           LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15  LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 777 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 598
           ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE
Sbjct: 75  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDE 134

Query: 597 SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAETDSRAEPQTIK 418
           SKRAVPTSKGQALAD+YGIKFFETSAKTNLNVEEVFFSIARDIKQRLA+TDS+AEPQTIK
Sbjct: 135 SKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIK 194

Query: 417 ISQPDQASGSGQAPQKSACCGT 352
           I+QPDQA G+ QA QKSACCG+
Sbjct: 195 INQPDQAGGANQAAQKSACCGS 216


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