BLASTX nr result

ID: Coptis25_contig00001131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001131
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    75   7e-12
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    61   8e-08
ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782...    60   2e-07
ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    59   3e-07
ref|XP_003537016.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    58   7e-07

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
 Frame = -3

Query: 239 RDELLKWTRELGKSVGTVIVIKKSDLGSVAGRTPRIVFGCERFGKY------KAKKGSKQ 78
           R+ L++W RE GK  G VI+I+++D+G+     PRI F CER G Y      K ++G K+
Sbjct: 16  REALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTGXDKGEEGKKK 75

Query: 77  QLPTEQTKSKKCDCPFVLKGIKMP 6
           +   + T +KKC CPF L+GIK+P
Sbjct: 76  R-KRKATGTKKCGCPFSLRGIKLP 98


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 239 RDELLKWTRELGKSVGTVIVIKKSDLGSV---AGRTPRIVFGCERFGKYKAKKGSKQQLP 69
           R+ LL W R +G+  G  ++I++SD G +    GR   ++ GCER GKY+  K +     
Sbjct: 513 REYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDAL---- 568

Query: 68  TEQTKSKKCDCPFVLKG 18
             +T +KKC CPF L+G
Sbjct: 569 ARKTGTKKCGCPFRLRG 585


>ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max]
          Length = 1403

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
 Frame = -3

Query: 239  RDELLKWTRELGKSVGTVIVIKKSDLGS------VAGRTPRIVFGCERFGKYKAKKGSKQ 78
            RD +L W RE+ K  G V+ I +S+  +      + G+T  ++ GCER GKY+  K +  
Sbjct: 810  RDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKT-YVILGCERSGKYRPYKNTLS 868

Query: 77   QLPTEQTKSKKCDCPFVLKGIKMPK 3
            ++    T SKKC+CPF LKG  + K
Sbjct: 869  KV----TSSKKCECPFKLKGKALNK 889


>ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 388

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -3

Query: 239 RDELLKWTRELGKSVGTVIVIKKSDLGSVA-GRTPRIVFGCERFGKYKAKKGSKQQLPTE 63
           R+++LKW R +    G V VI +SD  + + GRT  ++ GCER GKY    G K++    
Sbjct: 25  REDVLKWARTVAHENGFVAVIMRSDTYTGSRGRTSFVLIGCERSGKY---NGRKKEFVRR 81

Query: 62  QTKSKKCDCPFVLKG 18
            T ++KC CPF ++G
Sbjct: 82  DTGTRKCGCPFKIRG 96


>ref|XP_003537016.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 426

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -3

Query: 239 RDELLKWTRELGKSVGTVIVIKKSDLGSVA-GRTPRIVFGCERFGKYKAKKGSKQQLPTE 63
           R+++L+W R +    G V +I +SD  + + GRT  ++ GCER GKYK +   K++    
Sbjct: 37  REDVLQWARTVAHENGFVAIIMRSDTYTGSRGRTSFVLIGCERSGKYKCR---KKEFVRR 93

Query: 62  QTKSKKCDCPFVLKG 18
            T ++KC CPF ++G
Sbjct: 94  DTGTRKCGCPFKIRG 108


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