BLASTX nr result

ID: Coptis25_contig00001097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001097
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21967.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Viti...   177   8e-43
emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]   176   1e-42
ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Viti...   173   1e-41
ref|XP_002273834.1| PREDICTED: transcription factor bHLH30-like ...   169   2e-40

>emb|CBI21967.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/139 (63%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 VALKNHSDAERRRRERINSHLNSLRSLVPSSEKMDKASLLAEVIDHVKELKRTTAEACKG 236
           VALKNHS+AERRRR RIN+HL +LR ++P ++KMDKASLL EV+ H+KELKR+ AE  KG
Sbjct: 2   VALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKG 61

Query: 235 FVIPMDVDEVRVEPHEDAM-EGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEIST 59
           F++PMD+DEVRVE  E  + E  + IK  LCC+ +P + SDLR AL T +LKTV+AEI+T
Sbjct: 62  FLVPMDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIAT 121

Query: 58  LGGRMKTVFVMTGFKIENI 2
           LGGRMK VFVMTG K  N+
Sbjct: 122 LGGRMKNVFVMTGCKDGNL 140


>ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 259

 Score =  177 bits (449), Expect = 8e-43
 Identities = 88/139 (63%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 VALKNHSDAERRRRERINSHLNSLRSLVPSSEKMDKASLLAEVIDHVKELKRTTAEACKG 236
           VALKNHS+AERRRR RIN+HL +LR ++P ++KMDKASLL EV+ H+KELKR+ AE  KG
Sbjct: 63  VALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKG 122

Query: 235 FVIPMDVDEVRVEPHEDAM-EGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEIST 59
           F++PMD+DEVRVE  E  + E  + IK  LCC+ +P + SDLR AL T +LKTV+AEI+T
Sbjct: 123 FLVPMDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIAT 182

Query: 58  LGGRMKTVFVMTGFKIENI 2
           LGGRMK VFVMTG K  N+
Sbjct: 183 LGGRMKNVFVMTGCKDGNL 201


>emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]
          Length = 323

 Score =  176 bits (447), Expect = 1e-42
 Identities = 88/139 (63%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 VALKNHSDAERRRRERINSHLNSLRSLVPSSEKMDKASLLAEVIDHVKELKRTTAEACKG 236
           VALKNHS+AERRRR RIN+HL +LR ++P ++KMDKASLL EV+ H+KELKR  AE  KG
Sbjct: 64  VALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRXAAEISKG 123

Query: 235 FVIPMDVDEVRVEPHEDAM-EGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEIST 59
           F++PMD+DEVRVE  E  + E  + IK  LCC+ +P + SDLR AL T +LKTV+AEI+T
Sbjct: 124 FLVPMDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIAT 183

Query: 58  LGGRMKTVFVMTGFKIENI 2
           LGGRMK VFVMTG K  N+
Sbjct: 184 LGGRMKNVFVMTGCKDGNL 202


>ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 263

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/136 (61%), Positives = 107/136 (78%)
 Frame = -1

Query: 412 ALKNHSDAERRRRERINSHLNSLRSLVPSSEKMDKASLLAEVIDHVKELKRTTAEACKGF 233
           ALK+HSDAERRRRERIN+HL++LR  VP +EKMDKA+LLAEVI  VKELKR   +A KG 
Sbjct: 68  ALKSHSDAERRRRERINAHLDTLRGFVPCTEKMDKATLLAEVIQQVKELKRNATKASKGL 127

Query: 232 VIPMDVDEVRVEPHEDAMEGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEISTLG 53
           ++P++ DEVRVEPH+D  +G+F ++  +CC+ RPE+ S +++AL T  + TVKAEISTLG
Sbjct: 128 LLPIEEDEVRVEPHDDRTDGAFSLRASVCCDYRPELLSYIKQALDTLPINTVKAEISTLG 187

Query: 52  GRMKTVFVMTGFKIEN 5
           GRMK VFV T  K  N
Sbjct: 188 GRMKNVFVFTSCKQGN 203


>ref|XP_002273834.1| PREDICTED: transcription factor bHLH30-like [Vitis vinifera]
          Length = 258

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/134 (61%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
 Frame = -1

Query: 412 ALKNHSDAERRRRERINSHLNSLRSLVPSSEKMDKASLLAEVIDHVKELKRTTAEACKGF 233
           ALKNHS+AERRRRERIN HL++LR  VP +EKMDKA+LLAEVI  VKELK+  AEA KG 
Sbjct: 68  ALKNHSEAERRRRERINGHLSTLRGFVPCTEKMDKATLLAEVIQQVKELKKNAAEASKGL 127

Query: 232 VIPMDVDEVRVEPHEDAM-EGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEISTL 56
           ++PM+VDEVRVEPH+D   +G+      +CC+  P + SD+R+AL T N+ TVKAEIS+L
Sbjct: 128 LLPMEVDEVRVEPHDDGTGDGTSYFMASVCCDYSPRLLSDIRQALDTLNITTVKAEISSL 187

Query: 55  GGRMKTVFVMTGFK 14
           GGRMK++F+ T  K
Sbjct: 188 GGRMKSMFIFTSCK 201


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