BLASTX nr result

ID: Coptis25_contig00000985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000985
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275178.2| PREDICTED: vesicle-associated protein 4-2 [V...   338   3e-90
ref|XP_003573371.1| PREDICTED: vesicle-associated protein 4-2-li...   331   3e-88
ref|XP_002524692.1| structural molecule, putative [Ricinus commu...   331   3e-88
emb|CAN74544.1| hypothetical protein VITISV_011094 [Vitis vinifera]   328   2e-87
ref|XP_003527459.1| PREDICTED: vesicle-associated protein 4-2-li...   327   7e-87

>ref|XP_002275178.2| PREDICTED: vesicle-associated protein 4-2 [Vitis vinifera]
           gi|297745648|emb|CBI40859.3| unnamed protein product
           [Vitis vinifera]
          Length = 264

 Score =  338 bits (866), Expect = 3e-90
 Identities = 181/269 (67%), Positives = 200/269 (74%), Gaps = 3/269 (1%)
 Frame = +3

Query: 126 MGIIQNKASSNGKVFGLFKMPFKXXXXXXXXXXXXXXXXXXXXXXXXX---VDTSSVVPL 296
           M +   ++ S+GKV+G FK+PF+                            V+ S++ P 
Sbjct: 1   MAVPDQRSHSDGKVWGFFKLPFRGNNTITMSSSSTSHSSHLQHHHNQSNMQVEGSNLHPS 60

Query: 297 GASSTKTVSSVAXXXXXXXXXXXXXXXXKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT 476
           G+     VSSVA                KLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT
Sbjct: 61  GS-----VSSVARSLLPTRRRLRLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT 115

Query: 477 TAPKSCFMRPPGGILAPGEAIIATVFKFVEQPENNEIPKDQKSKDKFKIMSLKVKGEMDY 656
           TAPKSCFMRPPG ILAPGE++IATVFKFVE PENNE P +QKSK KFKIMSLKVKG MDY
Sbjct: 116 TAPKSCFMRPPGAILAPGESLIATVFKFVEHPENNEKPMEQKSKVKFKIMSLKVKGPMDY 175

Query: 657 VPELFDEQRDQVAVEQILRVVFLDAERPSSALEKLKRQLAEAEAALETRKKPPEDTGPRI 836
           VPE+FDE +DQVAVEQILRVVFLD ERPS AL+KLKRQLAEAEAA+E RKKPPED GPRI
Sbjct: 176 VPEMFDELKDQVAVEQILRVVFLDVERPSPALDKLKRQLAEAEAAVEARKKPPEDAGPRI 235

Query: 837 VGEGLVIDEWKERRERYLARQQVEGVDSV 923
           +GEGLVIDEWKERRERYLARQQVEGVDSV
Sbjct: 236 IGEGLVIDEWKERRERYLARQQVEGVDSV 264


>ref|XP_003573371.1| PREDICTED: vesicle-associated protein 4-2-like [Brachypodium
           distachyon]
          Length = 235

 Score =  331 bits (849), Expect = 3e-88
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +3

Query: 381 KLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQTTAPKSCFMRPPGGILAPGEAIIATVFKF 560
           KLYFPYEPGKQVRSA+RIKN SKSHVAFKFQTTAPKSCFMRPPGGILAPGE+IIATVFKF
Sbjct: 55  KLYFPYEPGKQVRSAVRIKNVSKSHVAFKFQTTAPKSCFMRPPGGILAPGESIIATVFKF 114

Query: 561 VEQPENNEIPKDQKSKDKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDAERP 740
           VE PENNE P DQK KDKFKI+SLKVKG ++YVPELFDEQ+DQVAVEQILRVVFLDAERP
Sbjct: 115 VEHPENNEKPLDQKCKDKFKIVSLKVKGPVEYVPELFDEQKDQVAVEQILRVVFLDAERP 174

Query: 741 SSALEKLKRQLAEAEAALETRKKPPEDTGPRIVGEGLVIDEWKERRERYLARQQVEGVDS 920
           S+ L++LKRQLAEAEAALE RKKPPEDTGPRIVGEGLVIDEWKERRERYLARQQVEGVDS
Sbjct: 175 SAQLDRLKRQLAEAEAALEARKKPPEDTGPRIVGEGLVIDEWKERRERYLARQQVEGVDS 234

Query: 921 V 923
           V
Sbjct: 235 V 235


>ref|XP_002524692.1| structural molecule, putative [Ricinus communis]
           gi|223536053|gb|EEF37711.1| structural molecule,
           putative [Ricinus communis]
          Length = 281

 Score =  331 bits (849), Expect = 3e-88
 Identities = 181/269 (67%), Positives = 197/269 (73%)
 Frame = +3

Query: 117 NNSMGIIQNKASSNGKVFGLFKMPFKXXXXXXXXXXXXXXXXXXXXXXXXXVDTSSVVPL 296
           NNS G   N  S+N KV+G FK+PF+                                 L
Sbjct: 18  NNSYG---NSNSNNNKVWGFFKLPFRGSNGNTVPSSSYTSSSSSTHQHSNTAQIEGS-NL 73

Query: 297 GASSTKTVSSVAXXXXXXXXXXXXXXXXKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT 476
            ASS  +VSSVA                KLYFPYEPGKQVRSAI+IKNTSKSHVAFKFQT
Sbjct: 74  HASSN-SVSSVARSLLPTRRRLKLDPATKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQT 132

Query: 477 TAPKSCFMRPPGGILAPGEAIIATVFKFVEQPENNEIPKDQKSKDKFKIMSLKVKGEMDY 656
           TAPKSCFMRPPG ILAPGE+IIATVFKFVE PENNE P +QKSK KFKIMSLKV G MDY
Sbjct: 133 TAPKSCFMRPPGAILAPGESIIATVFKFVEHPENNEKPVEQKSKVKFKIMSLKVNGMMDY 192

Query: 657 VPELFDEQRDQVAVEQILRVVFLDAERPSSALEKLKRQLAEAEAALETRKKPPEDTGPRI 836
           VPELF+EQ+DQ+A+EQILRVVFLD ERPS ALEKLKRQLA+A+AA+E RKKPPED GPRI
Sbjct: 193 VPELFEEQKDQIAMEQILRVVFLDPERPSPALEKLKRQLADADAAVEARKKPPEDAGPRI 252

Query: 837 VGEGLVIDEWKERRERYLARQQVEGVDSV 923
           +GEGLVIDEWKE RERYLARQQVEGVDSV
Sbjct: 253 IGEGLVIDEWKEGRERYLARQQVEGVDSV 281


>emb|CAN74544.1| hypothetical protein VITISV_011094 [Vitis vinifera]
          Length = 278

 Score =  328 bits (842), Expect = 2e-87
 Identities = 181/283 (63%), Positives = 200/283 (70%), Gaps = 17/283 (6%)
 Frame = +3

Query: 126 MGIIQNKASSNGKVFGLFKMPFKXXXXXXXXXXXXXXXXXXXXXXXXX---VDTSSVVPL 296
           M +   ++ S+GKV+G FK+PF+                            V+ S++ P 
Sbjct: 1   MAVPDQRSHSDGKVWGFFKLPFRGNNTITMSSSSTSHSSHLQHHHNQSNMQVEGSNLHPS 60

Query: 297 GASSTKTVSSVAXXXXXXXXXXXXXXXXKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT 476
           G+     VSSVA                KLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT
Sbjct: 61  GS-----VSSVARSLLPTRRRLRLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQT 115

Query: 477 TAPKSCFMRPPGGILAPGEAIIATVFKFVEQPENNEIPKDQKSKDKFKIMSLKVKGEMDY 656
           TAPKSCFMRPPG ILAPGE++IATVFKFVE PENNE P +QKSK KFKIMSLKVKG MDY
Sbjct: 116 TAPKSCFMRPPGAILAPGESLIATVFKFVEHPENNEKPMEQKSKVKFKIMSLKVKGPMDY 175

Query: 657 VPELFDEQRDQVAVEQILRVVFLDAERPS--------------SALEKLKRQLAEAEAAL 794
           VPE+FDE +DQVAVEQILRVVFLD ERPS               AL+KLKRQLAEAEAA+
Sbjct: 176 VPEMFDELKDQVAVEQILRVVFLDVERPSPRMPIYEIXPLYPVKALDKLKRQLAEAEAAV 235

Query: 795 ETRKKPPEDTGPRIVGEGLVIDEWKERRERYLARQQVEGVDSV 923
           E RKKPPED GPRI+GEGLVIDEWKERRERYLARQQVEGVDSV
Sbjct: 236 EARKKPPEDAGPRIIGEGLVIDEWKERRERYLARQQVEGVDSV 278


>ref|XP_003527459.1| PREDICTED: vesicle-associated protein 4-2-like [Glycine max]
          Length = 271

 Score =  327 bits (837), Expect = 7e-87
 Identities = 180/271 (66%), Positives = 194/271 (71%), Gaps = 5/271 (1%)
 Frame = +3

Query: 126 MGIIQNKASSNGKVFGLFKMPFKXXXXXXXXXXXXXXXXXXXXXXXXXVDTSSVV--PLG 299
           M +  +K  S+GKV+    MPF                          V   S +   L 
Sbjct: 1   MAVESDKVGSDGKVWSFCSMPFWQTTHASSSSSSTTTTIPTTSSMHHSVHHQSQILQSLD 60

Query: 300 ASS---TKTVSSVAXXXXXXXXXXXXXXXXKLYFPYEPGKQVRSAIRIKNTSKSHVAFKF 470
            S+   + TVSSVA                KLYFPYEPGKQVRSAI IKNT KSHVAFKF
Sbjct: 61  RSTHQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKF 120

Query: 471 QTTAPKSCFMRPPGGILAPGEAIIATVFKFVEQPENNEIPKDQKSKDKFKIMSLKVKGEM 650
           QTTAPKSC+MRPPGGILAPGE+IIATVFKFVE PENNE P DQKS+ KFKIMSLKVKGEM
Sbjct: 121 QTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEM 180

Query: 651 DYVPELFDEQRDQVAVEQILRVVFLDAERPSSALEKLKRQLAEAEAALETRKKPPEDTGP 830
           DYVPELFDEQRD VA EQILRV+FLD ERPS AL+KLKRQLAEAEAALE RKKPPE+TGP
Sbjct: 181 DYVPELFDEQRDHVADEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPPEETGP 240

Query: 831 RIVGEGLVIDEWKERRERYLARQQVEGVDSV 923
           R+ GEGLVIDEWKERRERYLARQQVE VDSV
Sbjct: 241 RVAGEGLVIDEWKERRERYLARQQVEVVDSV 271


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