BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000979
         (1529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteo...   487   e-135
ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteo...   481   e-133
ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteo...   478   e-132
gb|ACU20022.1| unknown [Glycine max]                                  478   e-132
ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|2...   472   e-130

>ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic [Vitis vinifera]
            gi|296083061|emb|CBI22465.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  487 bits (1254), Expect = e-135
 Identities = 248/353 (70%), Positives = 279/353 (79%)
 Frame = -1

Query: 1412 KLFSTPTSSKSVHVARRFFNSPSASTSLNNIPKQFKQENLKDGLMENYKNAPQHLYGLSA 1233
            KLFS P   +S    RR F SPSA  S ++IPKQF++ NL+DGLMENYKN PQ+ YGLS 
Sbjct: 39   KLFSAPKLGRSA--VRRGFRSPSAKASFDHIPKQFREGNLQDGLMENYKNVPQYFYGLSP 96

Query: 1232 SQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSMYXX 1053
            SQMDMFMTED+P+ RQSE+VTEE+ISSARNY+D+GGMWS SG+ D   S+YSMSVSMY  
Sbjct: 97   SQMDMFMTEDNPISRQSERVTEESISSARNYMDNGGMWSLSGVNDRGPSKYSMSVSMYRG 156

Query: 1052 XXXXXXXXXXXXXXXXXXXXXARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYIN 873
                                  RICYLGMPIVPAV ELLVAQFMWLD+DNPSKPIYLYIN
Sbjct: 157  GRGSGRPRTAPPDLPSLLLDA-RICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYIN 215

Query: 872  SPGTQNEQMETVGSETEAYAIADTMAYCKSNIYTVNCGMAYGQSAMLLSLGAKGYRALQP 693
            S GTQNE+METVGSETEAYAIAD+MAYCKS++YTVNCG AYGQ+AMLLS+GAKGYR LQP
Sbjct: 216  STGTQNEKMETVGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQP 275

Query: 692  NCSTKLYLPKVNRSSGAAIDMWIKAKELDANTDYYIELLAKGIGKSKEEITNDIQRPKYF 513
            N STKLYLPKVNRSSGA IDMWIKAKELDAN++YYIELLAKG GK+KEEI  D++RPKY 
Sbjct: 276  NASTKLYLPKVNRSSGATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIKKDVERPKYL 335

Query: 512  RAEEAIAYGIADKIIDSRDMAYEKRNYDEMLAQSKXXXXXXXXXXXXXPSGFR 354
            +A+EAI YG+ADKII S D AYEKRNYDEMLAQ+K             PSGFR
Sbjct: 336  QAQEAIDYGLADKIISSMDPAYEKRNYDEMLAQAKSMRRAAGAGPQAAPSGFR 388


>ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  481 bits (1237), Expect = e-133
 Identities = 250/358 (69%), Positives = 283/358 (79%), Gaps = 2/358 (0%)
 Frame = -1

Query: 1421 DTIKLFSTPTSSKSVHVARRFFNSPSASTSLNNIPKQFKQENLKDGLMENYKNAPQHLYG 1242
            D+  L  T     S  VA R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSSSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 1241 LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 1062
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKSDASKYSMSVSM 135

Query: 1061 YXXXXXXXXXXXXXXXXXXXXXXXARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 882
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNPSKPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYL 194

Query: 881  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSNIYTVNCGMAYGQSAMLLSLGAKGYRA 702
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+++YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 701  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDANTDYYIELLAKGIGKSKEEITNDIQRP 522
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ANT+YYIELLAKG GKSKEEI  D+QRP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 521  KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLAQSKXXXXXXXXXXXXXPSGFR 354
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEMLAQS+             PSGFR
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSRAMRRQGGGNPQAAPSGFR 372


>ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  478 bits (1230), Expect = e-132
 Identities = 249/358 (69%), Positives = 283/358 (79%), Gaps = 2/358 (0%)
 Frame = -1

Query: 1421 DTIKLFSTPTSSKSVHVARRFFNSPSASTSLNNIPKQFKQENLKDGLMENYKNAPQHLYG 1242
            D+  L  T     S  VA R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSFSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 1241 LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 1062
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKNDASKYSMSVSM 135

Query: 1061 YXXXXXXXXXXXXXXXXXXXXXXXARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 882
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNP+KPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYL 194

Query: 881  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSNIYTVNCGMAYGQSAMLLSLGAKGYRA 702
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+++YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 701  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDANTDYYIELLAKGIGKSKEEITNDIQRP 522
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ANT+YYIELLAKG GKSKEEI  D+QRP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 521  KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLAQSKXXXXXXXXXXXXXPSGFR 354
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEMLAQS+             PSGFR
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSRAKRRQGGGNPQAAPSGFR 372


>gb|ACU20022.1| unknown [Glycine max]
          Length = 364

 Score =  478 bits (1230), Expect = e-132
 Identities = 245/340 (72%), Positives = 278/340 (81%), Gaps = 2/340 (0%)
 Frame = -1

Query: 1421 DTIKLFSTPTSSKSVHVARRFFNSPSASTSLNNIPKQFKQENLKDGLMENYKNAPQHLYG 1242
            D+  L  T     S  VA R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSSSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 1241 LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 1062
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYIDNGGMWSLSGMGKSDASKYSMSVSM 135

Query: 1061 YXXXXXXXXXXXXXXXXXXXXXXXARICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 882
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNPSKPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYL 194

Query: 881  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSNIYTVNCGMAYGQSAMLLSLGAKGYRA 702
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+++YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 701  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDANTDYYIELLAKGIGKSKEEITNDIQRP 522
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ANT+YYIELLAKG GKSKEEI  D+QRP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 521  KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLAQSK 408
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEMLAQS+
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSR 354


>ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|222849581|gb|EEE87128.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  472 bits (1215), Expect = e-130
 Identities = 247/372 (66%), Positives = 286/372 (76%), Gaps = 6/372 (1%)
 Frame = -1

Query: 1505 MATSLISSVTTPPXXXXXXXXXXXXXXN----DTIKLFSTPTSSKSVHVARR-FFNSPSA 1341
            MATSL+S +  P               +     ++ L S P + + +   R  ++ SPSA
Sbjct: 3    MATSLLSPLAAPNPELVYPATGLQQKSSFLPSASLFLLSNPRNQRVLQQQRCCYYKSPSA 62

Query: 1340 STS-LNNIPKQFKQENLKDGLMENYKNAPQHLYGLSASQMDMFMTEDSPVRRQSEKVTEE 1164
            S + LN+IP QF++ENLKDGLMENYKN PQ LYGL+ SQMDMFMTED+P+RRQS  VTE+
Sbjct: 63   SGNPLNHIPTQFREENLKDGLMENYKNVPQSLYGLTPSQMDMFMTEDNPIRRQSGSVTEQ 122

Query: 1163 NISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSMYXXXXXXXXXXXXXXXXXXXXXXXAR 984
            +ISS +NYLDHGGM+S SGM D   S+YSMSVSMY                       AR
Sbjct: 123  SISSRKNYLDHGGMYSVSGMMDQGPSKYSMSVSMYRGGGRGYGRPESAPPDLPSLLLDAR 182

Query: 983  ICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEQMETVGSETEAYAIAD 804
            ICYLGMPIVPAVTELLVAQFM+LDY++PSKPIYLYINS GTQNE+METVGSETEAYAIAD
Sbjct: 183  ICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKMETVGSETEAYAIAD 242

Query: 803  TMAYCKSNIYTVNCGMAYGQSAMLLSLGAKGYRALQPNCSTKLYLPKVNRSSGAAIDMWI 624
             M+YCKS IYTVNCGMAYGQ+AMLLSLGAKGYRALQPN STKLYLPKVNRSSGAA+DMWI
Sbjct: 243  IMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPKVNRSSGAAVDMWI 302

Query: 623  KAKELDANTDYYIELLAKGIGKSKEEITNDIQRPKYFRAEEAIAYGIADKIIDSRDMAYE 444
            KAKELDANT+YYIELLAKG GK KEE+  DIQRPKY +A+EAI YGIADK++ S D A+E
Sbjct: 303  KAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDYGIADKLLSSNDDAFE 362

Query: 443  KRNYDEMLAQSK 408
            KR+YD +LAQ+K
Sbjct: 363  KRDYDALLAQTK 374