BLASTX nr result

ID: Coptis25_contig00000971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000971
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20136.3| unnamed protein product [Vitis vinifera]              135   6e-30
ref|XP_002283596.2| PREDICTED: probable leucine-rich repeat rece...   126   4e-27
emb|CBI20124.3| unnamed protein product [Vitis vinifera]              126   4e-27
ref|XP_002524511.1| ATP binding protein, putative [Ricinus commu...   126   4e-27
emb|CAN66180.1| hypothetical protein VITISV_025180 [Vitis vinifera]   125   5e-27

>emb|CBI20136.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  135 bits (340), Expect = 6e-30
 Identities = 66/118 (55%), Positives = 87/118 (73%)
 Frame = +1

Query: 1   LVDPRLESNYIKEEVLGMINVALLCTNSSPTLRPMMSSVVSMLEGQTAVQKVASGSGISS 180
           LVDP LESN+ KEEV+ MINVALLCT+ SP  RP MSSVVS+LEG+  VQ+++SG  ISS
Sbjct: 592 LVDPILESNFKKEEVMAMINVALLCTSFSPVARPTMSSVVSILEGRAHVQEISSGLSISS 651

Query: 181 DDMKFKAIRNQYQQILDPSMNDSQTQSMSMEAPWTESSTSASDLYPINPDSQYWKDRE 354
           D++K K +R QY      + ++ Q   +S + PWT SSTS +DLYPI  +SQYW++R+
Sbjct: 652 DEIKLKELRQQYDLYHAKNTSEGQIPCLSTDGPWTASSTSGADLYPITMNSQYWENRD 709


>ref|XP_002283596.2| PREDICTED: probable leucine-rich repeat receptor-like
            serine/threonine-protein kinase At3g14840-like [Vitis
            vinifera]
          Length = 1007

 Score =  126 bits (316), Expect = 4e-27
 Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    LVDPRLESNYIKEEVLGMINVALLCTNSSPTLRPMMSSVVSMLEGQTAVQKVASGSGISS 180
            LVDPRL S++ KEEV+ M+N+ALLCTN S  +RP MSSVVSMLEG TAVQ + S     S
Sbjct: 890  LVDPRLGSDFNKEEVMAMLNIALLCTNISSAVRPAMSSVVSMLEGITAVQDIVSDPSAPS 949

Query: 181  DDMKFKAIRNQYQQILDPSMNDSQTQSMSM-EAPWTESSTSASDLYPINPDSQYWKDRE 354
            DD+K K ++  Y+ I + SM+ S++++ SM + PWT SS S +DLYP+  DS+YW+ R+
Sbjct: 950  DDLKLKEMKEHYRHIQEKSMDVSESKAQSMPDGPWTASS-SITDLYPVTLDSEYWEKRD 1007


>emb|CBI20124.3| unnamed protein product [Vitis vinifera]
          Length = 1036

 Score =  126 bits (316), Expect = 4e-27
 Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    LVDPRLESNYIKEEVLGMINVALLCTNSSPTLRPMMSSVVSMLEGQTAVQKVASGSGISS 180
            LVDPRL S++ KEEV+ M+N+ALLCTN S  +RP MSSVVSMLEG TAVQ + S     S
Sbjct: 919  LVDPRLGSDFNKEEVMAMLNIALLCTNISSAVRPAMSSVVSMLEGITAVQDIVSDPSAPS 978

Query: 181  DDMKFKAIRNQYQQILDPSMNDSQTQSMSM-EAPWTESSTSASDLYPINPDSQYWKDRE 354
            DD+K K ++  Y+ I + SM+ S++++ SM + PWT SS S +DLYP+  DS+YW+ R+
Sbjct: 979  DDLKLKEMKEHYRHIQEKSMDVSESKAQSMPDGPWTASS-SITDLYPVTLDSEYWEKRD 1036


>ref|XP_002524511.1| ATP binding protein, putative [Ricinus communis]
            gi|223536185|gb|EEF37838.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 985

 Score =  126 bits (316), Expect = 4e-27
 Identities = 63/119 (52%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1    LVDPRLESNYIKEEVLGMINVALLCTNSSPTLRPMMSSVVSMLEGQTAVQK-VASGSGIS 177
            LVDPR+ +NY K +V+ MINVAL C + S   RP MSSVVS+LEG+T VQ  V   S +S
Sbjct: 867  LVDPRMGTNYDKNQVMTMINVALQCASVSSVARPAMSSVVSILEGKTTVQDLVLDDSNVS 926

Query: 178  SDDMKFKAIRNQYQQILDPSMNDSQTQSMSMEAPWTESSTSASDLYPINPDSQYWKDRE 354
             D+ K +A+R  +Q  ++   ++SQTQSMS++ PWT SS+SA DLYPI  DS YW+ R+
Sbjct: 927  HDEKKIEAMRKHFQHNIESQTSESQTQSMSLDGPWTGSSSSAGDLYPITLDSNYWESRK 985


>emb|CAN66180.1| hypothetical protein VITISV_025180 [Vitis vinifera]
          Length = 561

 Score =  125 bits (315), Expect = 5e-27
 Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   LVDPRLESNYIKEEVLGMINVALLCTNSSPTLRPMMSSVVSMLEGQTAVQKVASGSGISS 180
           LVDPRL S++ KEEV+ M+N+ALLCTN S  +RP MSSVVSMLEG TAVQ + S     S
Sbjct: 444 LVDPRLGSDFNKEEVMAMLNLALLCTNISSAVRPAMSSVVSMLEGITAVQDIVSDPSAPS 503

Query: 181 DDMKFKAIRNQYQQILDPSMNDSQTQSMSM-EAPWTESSTSASDLYPINPDSQYWKDRE 354
           DD+K K ++  Y+ I + SM+ S++++ SM + PWT SS S +DLYP+  DS+YW+ R+
Sbjct: 504 DDLKLKELKQHYRHIQEKSMDVSESKAQSMPDGPWTASS-SITDLYPVTLDSEYWEKRD 561


Top