BLASTX nr result
ID: Coptis25_contig00000967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000967
(2250 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ... 807 0.0
ref|XP_002510949.1| protein binding protein, putative [Ricinus c... 786 0.0
ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|2... 751 0.0
ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-... 749 0.0
ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|2... 749 0.0
>ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera]
gi|296084203|emb|CBI24591.3| unnamed protein product
[Vitis vinifera]
Length = 587
Score = 807 bits (2085), Expect = 0.0
Identities = 403/588 (68%), Positives = 461/588 (78%), Gaps = 1/588 (0%)
Frame = +1
Query: 55 MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 234
MG L +SA CTV S VGLQ WT SL + DG I++N IHSGNAS VLDLLL SH T
Sbjct: 1 MGASYLLVSAACTVFSFVGLQWWTEQSLHRLKSDGLISDNYIHSGNASRVLDLLLSSHAT 60
Query: 235 IALLANFVLNVFIFMILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 414
IALL NF LN+F+ +ILCLK IFF +L +E+RK++ RLINY++YKG FLPL++P TIFQ
Sbjct: 61 IALLVNFALNIFVLLILCLKTIFFAELYPSETRKLVGRLINYVIYKGTFLPLVVPSTIFQ 120
Query: 415 AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRVFSVLLFVLSIDVFWIRIC 594
A W+ WLT+LC+LKMFQALARDRLERLNASPSATPWTYFRVFSVLL VLS+D+FWI +C
Sbjct: 121 AGLWSMWLTILCSLKMFQALARDRLERLNASPSATPWTYFRVFSVLLLVLSVDLFWIWLC 180
Query: 595 MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 774
++IYR+L S MFLLLFFEP SIAFETLQAI+VHGFQL+D+WL S ++ +C S +F
Sbjct: 181 LVIYRTLSSPMFLLLFFEPWSIAFETLQAIVVHGFQLIDIWLHDSEGNSINCRGSKIFHI 240
Query: 775 LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 954
GSL EWKG LIRN+GF LD+ TLLMAL H+ ++WWLHGMAFHLVDA++FLNIRAL S
Sbjct: 241 SPVGSLLEWKGILIRNLGFLLDMATLLMALGHYLHIWWLHGMAFHLVDAILFLNIRALLS 300
Query: 955 AIIKRVRGFIKLTRALRTLHGALPDATSKELEAYDDECAICREPMAKAKKLSCNHLFHLA 1134
AI+KRV+GFIKL AL TLH ALPDATS+EL+AYDDECAICREPMAKAKKL CNHLFHLA
Sbjct: 301 AIVKRVKGFIKLRMALGTLHAALPDATSEELQAYDDECAICREPMAKAKKLHCNHLFHLA 360
Query: 1135 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQRGSGLDRTLSPG 1311
CLRSWLDQGL+EIYSCPTCR+PLF S P GEV +D+QLA Q SGLDR
Sbjct: 361 CLRSWLDQGLTEIYSCPTCRKPLFTGRSRDDANPRTGEVSSDEQLARQISSGLDRPGPAA 420
Query: 1312 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1491
LP G FP+Q E WR AGLD W H W +QGLDGAGPS AI SVGLGRVQMMM
Sbjct: 421 HALPAGVFPNQTHDALEISAWREAGLDPSWLHTWPNQGLDGAGPSTAIRSVGLGRVQMMM 480
Query: 1492 RQLASVGETYAQTALEDAPWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1671
R LASVGETYAQTALEDA WSLWPM AA A+R+ G NGGL R A
Sbjct: 481 RHLASVGETYAQTALEDAAWSLWPMNPSQAAASGLPIPPAA-AVRYPGGNGGLHMRTASR 539
Query: 1672 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1815
S NDN++NIL+MA+TVREVLP+IPDEIIFQ+LQ+TNS TVTVNNLLQM
Sbjct: 540 SANDNLANILAMAETVREVLPHIPDEIIFQDLQQTNSATVTVNNLLQM 587
>ref|XP_002510949.1| protein binding protein, putative [Ricinus communis]
gi|223550064|gb|EEF51551.1| protein binding protein,
putative [Ricinus communis]
Length = 585
Score = 786 bits (2029), Expect = 0.0
Identities = 389/588 (66%), Positives = 463/588 (78%), Gaps = 1/588 (0%)
Frame = +1
Query: 55 MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 234
MG L ISA CT S VGL+ WT +SLEK +G I+EN I+ NA+ L+LLLGS+ T
Sbjct: 1 MGAGYLAISAACTALSFVGLKCWTELSLEKLKSEGLISENFINPENANRALELLLGSYAT 60
Query: 235 IALLANFVLNVFIFMILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 414
IALLA+FV N FI + L LK IFF +L +E+RK++ERL+NY++YKG FLPL++P TIFQ
Sbjct: 61 IALLASFVFNAFILLNLSLKTIFFAELYPSETRKLMERLVNYVIYKGTFLPLVIPATIFQ 120
Query: 415 AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRVFSVLLFVLSIDVFWIRIC 594
A W+SWLTVLC+LKMFQALARDRLERLNASPSA PWTYFRV+SVLL VLS+D FWIR+C
Sbjct: 121 AGLWSSWLTVLCSLKMFQALARDRLERLNASPSAMPWTYFRVYSVLLLVLSVDFFWIRLC 180
Query: 595 MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 774
LIYR+L ++MF+LLF+EP SIAFET+QA++VHGFQLLD+W HSA ++ +C+R FD
Sbjct: 181 WLIYRTLDTSMFMLLFYEPFSIAFETMQAMLVHGFQLLDIWFHHSAGNDANCQRFKFFDP 240
Query: 775 LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 954
+AAGSL EWKG LIRN+GF LD+ TLLMAL H+ ++WWLHG+AFHLVDAV+FLNIRAL S
Sbjct: 241 IAAGSLSEWKGILIRNLGFSLDMATLLMALGHYMHIWWLHGVAFHLVDAVLFLNIRALLS 300
Query: 955 AIIKRVRGFIKLTRALRTLHGALPDATSKELEAYDDECAICREPMAKAKKLSCNHLFHLA 1134
AIIKRVRGF+KL AL LH ALPDATS+EL AYDDECAICREPMAKAKKL C+HLFHLA
Sbjct: 301 AIIKRVRGFVKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKKLHCSHLFHLA 360
Query: 1135 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQRGSGLDRTLSPG 1311
CLRSWLDQGL+E+YSCPTCR+PLF ++ P H +V D+QLA Q GLD+ +P
Sbjct: 361 CLRSWLDQGLNEMYSCPTCRKPLFVGRPDNEPSRHRRDVSADEQLARQISEGLDQQNAP- 419
Query: 1312 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1491
LP G FP+Q++ E PWR AGLDS W H W QG+DGAGPS A+ SVGLGRVQMMM
Sbjct: 420 -TLPAGVFPNQMRNSIEGSPWRSAGLDSSWLHTWQGQGVDGAGPSTAMRSVGLGRVQMMM 478
Query: 1492 RQLASVGETYAQTALEDAPWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1671
R LASVGETYAQTALED+ WSLWPM + AT R G GGL R+
Sbjct: 479 RHLASVGETYAQTALEDSAWSLWPM-NPPQGVASGSLVPPATGGRSAGGTGGLHMRSPSR 537
Query: 1672 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1815
S NDN++N+L+MA+TVREVLP+IPDE+I Q+LQRTNSVTVTVNNLLQM
Sbjct: 538 SANDNVANLLAMAETVREVLPHIPDELILQDLQRTNSVTVTVNNLLQM 585
>ref|XP_002303501.1| predicted protein [Populus trichocarpa] gi|222840933|gb|EEE78480.1|
predicted protein [Populus trichocarpa]
Length = 581
Score = 751 bits (1939), Expect = 0.0
Identities = 381/589 (64%), Positives = 448/589 (76%), Gaps = 2/589 (0%)
Frame = +1
Query: 55 MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 234
MG L ISA+CTV S L T VSL DG I EN+ + NA+H L+LL GS+ T
Sbjct: 1 MGASYLAISAVCTVLSFSVL---TEVSLHILRSDGLIVENLTNFENANHALELLFGSYAT 57
Query: 235 IALLANFVLNVFIFMILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 414
IAL+ NFV NVFI + LCLK IFF +L +E++K++ERLINY +YKG LPL++PPTI Q
Sbjct: 58 IALVVNFVFNVFILLNLCLKTIFFGELYPSETQKLVERLINYAIYKGTLLPLVIPPTISQ 117
Query: 415 AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRVFSVLLFVLSIDVFWIRIC 594
W+ WLT LC+LKMFQALARDRLERLNASPSATPWTYFR +S+LL VLS+D+FWI +C
Sbjct: 118 IGLWSIWLTGLCSLKMFQALARDRLERLNASPSATPWTYFRAYSMLLLVLSVDLFWIHMC 177
Query: 595 MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 774
+IYRS GS+MFLLLFFEP SIAFET+QA++VHGFQLL++WL HS ++ +C+R FD
Sbjct: 178 YVIYRSTGSSMFLLLFFEPFSIAFETMQAMLVHGFQLLEIWLHHSTGNSANCQRFKFFDA 237
Query: 775 LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 954
+ AGSL EWKG LIR++GF LD+ LLMAL H+ ++WWLHG+A HLVD V+F NIRAL S
Sbjct: 238 IRAGSLLEWKGILIRDLGFSLDMAALLMALGHYVHIWWLHGVALHLVDVVLFFNIRALLS 297
Query: 955 AIIKRVRGFIKLTRALRTLHGALPDATSKELEAYDDECAICREPMAKAKKLSCNHLFHLA 1134
AIIKR++GFIKL AL LH AL DATS+EL AYDDECAICREPMAKAK+L C+HLFHLA
Sbjct: 298 AIIKRIKGFIKLRMALDALHAALSDATSEELRAYDDECAICREPMAKAKRLLCSHLFHLA 357
Query: 1135 CLRSWLDQGLSEIYSCPTCRRPLF-ASSESSPLPHPGEVLTDDQLAHQRGSGLDRTLSPG 1311
CLRSWLDQGL+EIYSCPTCR+PLF E+ H GEVL D+QLAHQ G DR +PG
Sbjct: 358 CLRSWLDQGLNEIYSCPTCRKPLFLGRPENEANTHTGEVLADEQLAHQINEGFDRQNTPG 417
Query: 1312 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1491
+ L GAFP QIQ +ES PWR AGLDS W W+ QG DGAGPS A+ SVGLG VQMMM
Sbjct: 418 RALLDGAFPTQIQNSTESSPWRSAGLDSSWLPNWSGQGADGAGPSTAMRSVGLGGVQMMM 477
Query: 1492 RQLASVGETYAQTALEDAPWSLWPMTHXXXXXXXXXXXXAATALRFTGRN-GGLRFRNAP 1668
R LASVGETYAQTALEDA WSLWPM+ AA GR+ GGL R A
Sbjct: 478 RHLASVGETYAQTALEDAAWSLWPMSPSQATPSGSSTPPAA-----AGRHPGGLHMRTAS 532
Query: 1669 PSVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1815
S ND I+NIL+MA+TVREVLP++PDE+I Q+LQRTNS TVTVNNLL M
Sbjct: 533 HSTNDFIANILAMAETVREVLPHVPDELILQDLQRTNSATVTVNNLLHM 581
>ref|XP_003522880.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max]
Length = 586
Score = 749 bits (1935), Expect = 0.0
Identities = 372/588 (63%), Positives = 449/588 (76%), Gaps = 1/588 (0%)
Frame = +1
Query: 55 MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 234
M L ++ IS + TV S VGLQ T +SL+K DG + N+IH NAS ++L LG + T
Sbjct: 1 MALRVIAISVVSTVLSFVGLQFCTDLSLDKLTSDGLVGWNLIHLDNASQDIELPLGLYTT 60
Query: 235 IALLANFVLNVFIFMILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 414
I LL N ++NVFI + LCLKA+FF +L +E+RK++ERLINY++YKG FLPLI+PPTI+Q
Sbjct: 61 IGLLVNCMINVFILLNLCLKAVFFTELYASETRKLVERLINYVIYKGMFLPLIVPPTIYQ 120
Query: 415 AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRVFSVLLFVLSIDVFWIRIC 594
A W++WLTVLC+LKMFQALARDRLERLNASP+ATPWTY RV+S LLFV +DV WIR C
Sbjct: 121 AGLWSTWLTVLCSLKMFQALARDRLERLNASPAATPWTYLRVYSALLFVFMVDVLWIRFC 180
Query: 595 MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 774
+ IYR+ GS+M+LLLFFEP SI FETLQAI++HGFQLLD+WL HSA ++ L D
Sbjct: 181 LTIYRTHGSSMYLLLFFEPFSIVFETLQAILIHGFQLLDIWLHHSACNSNDFRTPKLLDM 240
Query: 775 LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 954
L AGSL E KG LIRN+GFFLD+ T MAL H+ +WWLHGMAFHLVDA IFLNIRAL S
Sbjct: 241 LTAGSLLELKGILIRNLGFFLDMATFFMALGHYLYIWWLHGMAFHLVDAFIFLNIRALLS 300
Query: 955 AIIKRVRGFIKLTRALRTLHGALPDATSKELEAYDDECAICREPMAKAKKLSCNHLFHLA 1134
AII R++GFI+L AL TLH ALPDAT++EL AYDDECAICREPMAKAK+L+CNHLFHLA
Sbjct: 301 AIINRIKGFIRLRIALGTLHAALPDATTEELRAYDDECAICREPMAKAKRLNCNHLFHLA 360
Query: 1135 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQRGSGLDRTLSPG 1311
CLRSWLDQGL+E+Y+CPTCR+PLFA E+ G + +D+QLA Q +GLDR S
Sbjct: 361 CLRSWLDQGLTEMYTCPTCRKPLFAGVPENQTNSDVGTISSDEQLARQISAGLDRPNSAR 420
Query: 1312 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1491
+P G +P+Q E +PWRGAGLDS W H W +QG+DGAGPS AI +VGLGRVQMMM
Sbjct: 421 HTMPAGLYPNQTLNTPEGVPWRGAGLDSGWWHSWPNQGVDGAGPSTAIRTVGLGRVQMMM 480
Query: 1492 RQLASVGETYAQTALEDAPWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1671
R LASVGETYAQTA ED W+LWP+ + R R G L RNA
Sbjct: 481 RHLASVGETYAQTAFEDTAWNLWPIN--PSQASASGSTISPPGGRLPERTGSLHLRNASQ 538
Query: 1672 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQM 1815
S ND+++NIL+MA+TVREVLP+IPD++IFQ+LQRTNSVTVTVNNLLQM
Sbjct: 539 SANDDVANILAMAETVREVLPHIPDDMIFQDLQRTNSVTVTVNNLLQM 586
>ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|222871161|gb|EEF08292.1|
predicted protein [Populus trichocarpa]
Length = 571
Score = 749 bits (1934), Expect = 0.0
Identities = 377/587 (64%), Positives = 440/587 (74%), Gaps = 1/587 (0%)
Frame = +1
Query: 55 MGLYLLPISALCTVASLVGLQLWTVVSLEKFNLDGSIAENVIHSGNASHVLDLLLGSHVT 234
MG+ + ISA+CT S VGLQ WT VSL++ DG I EN I+S N + L+LL S+ T
Sbjct: 1 MGVSYIAISAVCTALSFVGLQWWTEVSLDRLRSDGLIGENFINSENVNRALELLFSSYAT 60
Query: 235 IALLANFVLNVFIFMILCLKAIFFVKLNQTESRKVLERLINYLVYKGAFLPLILPPTIFQ 414
IALL IFF +L +E+RK++ERLINY +YKG FLPL++PPTI Q
Sbjct: 61 IALLT----------------IFFGELYSSETRKLVERLINYAIYKGTFLPLVIPPTISQ 104
Query: 415 AVTWTSWLTVLCTLKMFQALARDRLERLNASPSATPWTYFRVFSVLLFVLSIDVFWIRIC 594
W+ WLTVLC+LKMFQALARDRLERLNASPSATPWTY RV+S LL VLS+D FWI++C
Sbjct: 105 TGLWSIWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLLVLSVDFFWIQMC 164
Query: 595 MLIYRSLGSTMFLLLFFEPLSIAFETLQAIMVHGFQLLDMWLRHSAESNTSCERSHLFDK 774
+IYRS GS+MFLLLFFEP SIAFET+QA++VHGFQLL++W HSA ++T+C+R FD
Sbjct: 165 FVIYRSTGSSMFLLLFFEPFSIAFETMQAMLVHGFQLLEIWFHHSAGNSTNCQRFKFFDA 224
Query: 775 LAAGSLWEWKGTLIRNVGFFLDIMTLLMALCHHFNVWWLHGMAFHLVDAVIFLNIRALGS 954
+ AGSL EWKG LIRN+GF LD+ TLLMAL H+ +WWLHG+AFHLVDAV+FLNIRAL S
Sbjct: 225 MRAGSLLEWKGVLIRNLGFSLDMATLLMALGHYVYIWWLHGVAFHLVDAVLFLNIRALLS 284
Query: 955 AIIKRVRGFIKLTRALRTLHGALPDATSKELEAYDDECAICREPMAKAKKLSCNHLFHLA 1134
AIIKR++GFIKL AL LH ALPDATS+EL AYDDECAICREPMAKAK+L C+H+FHL
Sbjct: 285 AIIKRIKGFIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCSHIFHLV 344
Query: 1135 CLRSWLDQGLSEIYSCPTCRRPLFAS-SESSPLPHPGEVLTDDQLAHQRGSGLDRTLSPG 1311
CLRSWLDQGL+EIYSCPTCR+PLF E+ H GE LTD+QLAHQ G DR +PG
Sbjct: 345 CLRSWLDQGLNEIYSCPTCRKPLFVDRPENEASTHTGEALTDEQLAHQINEGRDRQNTPG 404
Query: 1312 QGLPVGAFPDQIQTPSESMPWRGAGLDSRWTHPWTSQGLDGAGPSNAITSVGLGRVQMMM 1491
L G FP+QI+ E PWR AGLDS W W SQG DGAGPS A+ SVGLGRVQMMM
Sbjct: 405 HVLSAGVFPNQIRNSMEGSPWRSAGLDSSWLPTWPSQGGDGAGPSTAMRSVGLGRVQMMM 464
Query: 1492 RQLASVGETYAQTALEDAPWSLWPMTHXXXXXXXXXXXXAATALRFTGRNGGLRFRNAPP 1671
R LASVGETYAQTALEDA WSLWP T+ A R G GGL
Sbjct: 465 RHLASVGETYAQTALEDAAWSLWP-TNPSHATPSTSFIPPAAGGRRPGGTGGLHVSTTSR 523
Query: 1672 SVNDNISNILSMADTVREVLPNIPDEIIFQELQRTNSVTVTVNNLLQ 1812
+ NDNI+NIL+MA+TVREVLP+IPDE+I Q+LQRTNS TVTVNNLLQ
Sbjct: 524 TTNDNIANILAMAETVREVLPHIPDELILQDLQRTNSATVTVNNLLQ 570