BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000963
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001778695.1| predicted protein [Physcomitrella patens sub...    64   4e-11
ref|XP_001772217.1| predicted protein [Physcomitrella patens sub...    64   4e-11
ref|NP_200637.1| regulatory particle triple-A ATPase 3 [Arabidop...    64   4e-11
ref|XP_001765848.1| predicted protein [Physcomitrella patens sub...    64   4e-11
gb|AFW70814.1| 26S proteasome regulatory complex ATPase RPT3 [Ze...    63   7e-11

>ref|XP_001778695.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669910|gb|EDQ56488.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 416

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   KKKASNKDIGNCDIQM*EIAEAVELPLTYHDLYK*IGIDPSRGVSL 140
           K   S  DIG CDIQ  EI EAVELPLT+H+LYK IGIDP RGV L
Sbjct: 157 KPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 202



 Score = 28.9 bits (63), Expect(2) = 4e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 131 RVVGSEVVQKYLGE 172
           RVVGSE VQKYLGE
Sbjct: 227 RVVGSEFVQKYLGE 240


>ref|XP_001772217.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676548|gb|EDQ63030.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 412

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   KKKASNKDIGNCDIQM*EIAEAVELPLTYHDLYK*IGIDPSRGVSL 140
           K   S  DIG CDIQ  EI EAVELPLT+H+LYK IGIDP RGV L
Sbjct: 153 KPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 198



 Score = 28.9 bits (63), Expect(2) = 4e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 131 RVVGSEVVQKYLGE 172
           RVVGSE VQKYLGE
Sbjct: 223 RVVGSEFVQKYLGE 236


>ref|NP_200637.1| regulatory particle triple-A ATPase 3 [Arabidopsis thaliana]
           gi|297793353|ref|XP_002864561.1| hypothetical protein
           ARALYDRAFT_495939 [Arabidopsis lyrata subsp. lyrata]
           gi|28558168|sp|Q9SEI4.1|PRS6B_ARATH RecName: Full=26S
           protease regulatory subunit 6B homolog; AltName:
           Full=26S protease subunit 6B homolog; AltName: Full=26S
           proteasome AAA-ATPase subunit RPT3; AltName:
           Full=Protein BMAA insensitive morphology 409; AltName:
           Full=Regulatory particle triple-A ATPase subunit 3
           gi|6652882|gb|AAF22523.1|AF123392_1 26S proteasome
           AAA-ATPase subunit RPT3 [Arabidopsis thaliana]
           gi|8777330|dbj|BAA96920.1| 26S proteasome AAA-ATPase
           subunit RPT3 [Arabidopsis thaliana]
           gi|17979231|gb|AAL49932.1| AT4g10340/F24G24_140
           [Arabidopsis thaliana] gi|56382019|gb|AAV85728.1|
           At5g58290 [Arabidopsis thaliana]
           gi|297310396|gb|EFH40820.1| hypothetical protein
           ARALYDRAFT_495939 [Arabidopsis lyrata subsp. lyrata]
           gi|332009646|gb|AED97029.1| regulatory particle triple-A
           ATPase 3 [Arabidopsis thaliana]
          Length = 408

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   KKKASNKDIGNCDIQM*EIAEAVELPLTYHDLYK*IGIDPSRGVSL 140
           K   S  DIG CDIQ  EI EAVELPLT+H+LYK IGIDP RGV L
Sbjct: 149 KPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 194



 Score = 28.9 bits (63), Expect(2) = 4e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 131 RVVGSEVVQKYLGE 172
           RVVGSE VQKYLGE
Sbjct: 219 RVVGSEFVQKYLGE 232


>ref|XP_001765848.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683025|gb|EDQ69439.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 387

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 32/46 (69%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   KKKASNKDIGNCDIQM*EIAEAVELPLTYHDLYK*IGIDPSRGVSL 140
           K   S  DIG CDIQ  EI EAVELPLT+H+LYK IGIDP RGV L
Sbjct: 128 KPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 173



 Score = 28.9 bits (63), Expect(2) = 4e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 131 RVVGSEVVQKYLGE 172
           RVVGSE VQKYLGE
Sbjct: 198 RVVGSEFVQKYLGE 211


>gb|AFW70814.1| 26S proteasome regulatory complex ATPase RPT3 [Zea mays]
          Length = 474

 Score = 62.8 bits (151), Expect(2) = 7e-11
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   KKKASNKDIGNCDIQM*EIAEAVELPLTYHDLYK*IGIDPSRGVSL 140
           K   +  DIG CDIQ  EI EAVELPLT+H+LYK IGIDP RGV L
Sbjct: 215 KPNVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 260



 Score = 28.9 bits (63), Expect(2) = 7e-11
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +2

Query: 131 RVVGSEVVQKYLGE 172
           RVVGSE VQKYLGE
Sbjct: 285 RVVGSEFVQKYLGE 298