BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000962
         (1958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   792   0.0  
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ...   789   0.0  
sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   780   0.0  
ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   778   0.0  
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   776   0.0  

>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
            sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
            sativus]
          Length = 505

 Score =  792 bits (2045), Expect = 0.0
 Identities = 398/492 (80%), Positives = 431/492 (87%), Gaps = 6/492 (1%)
 Frame = +1

Query: 49   MSRYDNRSGDPSSYRPRTDSSL--GTTGF----EPPRSKKEYDXXXXXXXXXXKKIDLLD 210
            MSRYD+RS DP+SYR R   S   G+TG+        SK +Y           KK+DL D
Sbjct: 1    MSRYDSRSSDPTSYRDRRSDSGYGGSTGYGGSVRSSSSKSDY-----YGSEAPKKLDL-D 54

Query: 211  GLTHFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEV 390
            GL HFEKNFY E+PSVA+MT+ E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YVMQE+
Sbjct: 55   GLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEI 114

Query: 391  MKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPI 570
             KAGF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPI
Sbjct: 115  AKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPI 174

Query: 571  VLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI 750
            VLVLAPTRELAVQIQQEATKFG+SSKIK+TC+YGGVPKGPQVRDLQKGVEIVIATPGRLI
Sbjct: 175  VLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLI 234

Query: 751  DMMESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEIL 930
            DMMESHHTNLRRVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE L
Sbjct: 235  DMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQL 294

Query: 931  ARQFLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTK 1110
            ARQFLYNPYKV+IGS DLKANHAI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTK
Sbjct: 295  ARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTK 354

Query: 1111 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK 1290
            KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVK
Sbjct: 355  KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVK 414

Query: 1291 YVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPEL 1470
            YVINYDFPGSLEDYVH                FFTAANARFAKELI ILEEAGQKV+PEL
Sbjct: 415  YVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPEL 474

Query: 1471 AKMGRGVPPPPT 1506
            A MGRG PPPP+
Sbjct: 475  AAMGRGAPPPPS 486


>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 505

 Score =  789 bits (2037), Expect = 0.0
 Identities = 395/487 (81%), Positives = 429/487 (88%), Gaps = 1/487 (0%)
 Frame = +1

Query: 49   MSRYDNRSGDPSSYRPR-TDSSLGTTGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLTHF 225
            MSRYD+RSGDP+SYR R +DS  G         +   +          +K DL DGLT F
Sbjct: 1    MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDL-DGLTPF 59

Query: 226  EKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAGF 405
            EKNFY ESPSVA+M++ E+E YR +R+ITVEG+DVPKPV+ FRD+GFP+YV++EV +AGF
Sbjct: 60   EKNFYVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGF 119

Query: 406  VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA 585
            VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA
Sbjct: 120  VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA 179

Query: 586  PTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES 765
            PTRELAVQIQQEATKFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ES
Sbjct: 180  PTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239

Query: 766  HHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQFL 945
            HHTNLRRVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LARQFL
Sbjct: 240  HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFL 299

Query: 946  YNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCDQ 1125
            YNPYKVVIGS+DLKANHAI QHV+IVSENQKY KLV L+EDIMDGSRIL+FMDTKKGCDQ
Sbjct: 300  YNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 359

Query: 1126 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINY 1305
            ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINY
Sbjct: 360  ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINY 419

Query: 1306 DFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMGR 1485
            DFPGSLEDYVH                FFTA+NARFAKELI ILEEAGQKV+PELA MGR
Sbjct: 420  DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTASNARFAKELISILEEAGQKVSPELAAMGR 479

Query: 1486 GVPPPPT 1506
            G PPPP+
Sbjct: 480  GAPPPPS 486


>sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
          Length = 494

 Score =  780 bits (2013), Expect = 0.0
 Identities = 394/487 (80%), Positives = 422/487 (86%), Gaps = 3/487 (0%)
 Frame = +1

Query: 49   MSRYDNRSGDPSSYRPRTDSSL---GTTGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLT 219
            MSR+D R+ DP SYR R        GT  F P  SK +                 LDGL 
Sbjct: 1    MSRFDGRAADPGSYRDRRSEGAFGGGTRAFAPT-SKADSAAAAAD----------LDGLP 49

Query: 220  HFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKA 399
             FEKNFY ESPSVA MT+EE+EAYR +R+ITVEG+DVPKPVREFRD+GFPEYV+QE+ KA
Sbjct: 50   RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109

Query: 400  GFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV 579
            GFVEPTPIQ+QGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV
Sbjct: 110  GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLV 169

Query: 580  LAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMM 759
            LAPTRELAVQIQQEATKFG+SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+
Sbjct: 170  LAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMI 229

Query: 760  ESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQ 939
            ESHHTNLRRVTYLVLDEADRMLDMGFEPQ+KKIVSQIRPDRQTLYWSATWPKEVE LAR 
Sbjct: 230  ESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARN 289

Query: 940  FLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGC 1119
            FL++PYKV+IGS +LKANHAI QHVEI+SE+QKY KLV+L+EDIMDGSRIL+FMDTKKGC
Sbjct: 290  FLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGC 349

Query: 1120 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVI 1299
            DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVI
Sbjct: 350  DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 409

Query: 1300 NYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKM 1479
            NYDFPGSLEDYVH                FFTAANARFAK+LI ILEEAGQKV+PELA M
Sbjct: 410  NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANM 469

Query: 1480 GRGVPPP 1500
            GRG PPP
Sbjct: 470  GRGAPPP 476


>ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine max]
          Length = 507

 Score =  778 bits (2008), Expect = 0.0
 Identities = 389/488 (79%), Positives = 424/488 (86%), Gaps = 2/488 (0%)
 Frame = +1

Query: 49   MSRYDNRSGDPSSYRPR-TDSSLGT-TGFEPPRSKKEYDXXXXXXXXXXKKIDLLDGLTH 222
            MSRYD+RSGDP+SYR R +DS LG  TGF         +          K+   LDGL H
Sbjct: 1    MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH 60

Query: 223  FEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQEVMKAG 402
            FEKNFY ESP+V +MTD E+  YR +R+ITVEG+D+PKPV+ F D GFPEYVM+E+ KAG
Sbjct: 61   FEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAG 120

Query: 403  FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVL 582
            F EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLP+IVHVNAQPIL PGDGPIVLVL
Sbjct: 121  FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPGDGPIVLVL 180

Query: 583  APTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMME 762
            APTRELAVQIQQEATKFG+SS+IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+E
Sbjct: 181  APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 240

Query: 763  SHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEILARQF 942
            S+HTNL+RVTYLVLDEADRMLDMGF+PQ++KIVSQIRPDRQTLYWSATWPKEVE LAR+F
Sbjct: 241  SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF 300

Query: 943  LYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDTKKGCD 1122
            LYNPYKV+IGSSDLKANHAI Q+V+IVSE QKY KLV L+EDIMDGSRIL+FMDTKKGCD
Sbjct: 301  LYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD 360

Query: 1123 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVIN 1302
            QITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVIN
Sbjct: 361  QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN 420

Query: 1303 YDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPELAKMG 1482
            YDFPGSLEDYVH                +FTAANARFAKELI ILEEAGQKV+PELA MG
Sbjct: 421  YDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMG 480

Query: 1483 RGVPPPPT 1506
            RG PPPP+
Sbjct: 481  RGAPPPPS 488


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
            gi|297743075|emb|CBI35942.3| unnamed protein product
            [Vitis vinifera]
          Length = 506

 Score =  776 bits (2005), Expect = 0.0
 Identities = 391/493 (79%), Positives = 424/493 (86%), Gaps = 7/493 (1%)
 Frame = +1

Query: 49   MSRYDNRSGDPSSYRPRTDSS-------LGTTGFEPPRSKKEYDXXXXXXXXXXKKIDLL 207
            MSRYD RSGDP SYR R   S        G+ G     SK++ D          +K DL 
Sbjct: 1    MSRYDGRSGDPGSYRDRRSESGFGGASGYGSGGVRSSSSKRDLDGVESP-----RKPDL- 54

Query: 208  DGLTHFEKNFYAESPSVASMTDEEIEAYRLKRQITVEGKDVPKPVREFRDIGFPEYVMQE 387
            DGLT FEKNFY ESP+VA+M+++E+E YR +R+ITVEG+DVPKPV  FRD+G PEYVMQE
Sbjct: 55   DGLTPFEKNFYVESPAVAAMSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQE 114

Query: 388  VMKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGP 567
            + KAGF EPTPIQAQGWPMALKGRD+IGIAETGSGKTLAYLLPAI+HVNAQPILAPGDGP
Sbjct: 115  ITKAGFAEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPGDGP 174

Query: 568  IVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRL 747
            IVLVLAPTRELAVQIQQEA KFG+SS+IK+TCI+GGVPKGPQ+RDLQKGVEIVIATPGRL
Sbjct: 175  IVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRL 234

Query: 748  IDMMESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVSQIRPDRQTLYWSATWPKEVEI 927
            IDM+ESHHTNLRRVTYLVLDEADRMLDMGFEPQ++KIVSQIRPDRQTLYWSATWPKEVE 
Sbjct: 235  IDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQ 294

Query: 928  LARQFLYNPYKVVIGSSDLKANHAIHQHVEIVSENQKYKKLVDLMEDIMDGSRILVFMDT 1107
            LAR+FLYNP KVVIGS+DLKANHAI QHVEIVSENQKY +LV L+EDIMDG RIL+FMDT
Sbjct: 295  LARKFLYNPCKVVIGSADLKANHAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMDT 354

Query: 1108 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV 1287
            KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV
Sbjct: 355  KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDV 414

Query: 1288 KYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIVILEEAGQKVNPE 1467
            K+VINYDFPGSLEDYVH                FFTAANARFAKELI ILEEAGQ+V PE
Sbjct: 415  KFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVAPE 474

Query: 1468 LAKMGRGVPPPPT 1506
            LA MGRG PPPP+
Sbjct: 475  LAAMGRGAPPPPS 487