BLASTX nr result

ID: Coptis25_contig00000961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000961
         (1798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282726.1| PREDICTED: uncharacterized protein LOC100243...   543   e-152
ref|XP_002520502.1| conserved hypothetical protein [Ricinus comm...   511   e-142
ref|XP_002299845.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137
ref|XP_002864610.1| hypothetical protein ARALYDRAFT_919132 [Arab...   479   e-132
ref|NP_851219.1| myosin heavy chain-related protein [Arabidopsis...   474   e-131

>ref|XP_002282726.1| PREDICTED: uncharacterized protein LOC100243231 [Vitis vinifera]
            gi|297745999|emb|CBI16055.3| unnamed protein product
            [Vitis vinifera]
          Length = 447

 Score =  543 bits (1400), Expect = e-152
 Identities = 295/449 (65%), Positives = 347/449 (77%), Gaps = 1/449 (0%)
 Frame = +2

Query: 209  MASHHATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQSGGQLSESDI 388
            M SHHATLGRRTLEEIRQKRAAERL KA+SGPDL    NP  ++GI +S S  +LSE+D+
Sbjct: 1    MESHHATLGRRTLEEIRQKRAAERLVKAASGPDLSQVLNPNDNMGIKQSDSSNRLSENDV 60

Query: 389  SGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIENDVLHKRLNDLEQNSVPSLRKALRDV 568
            S LVSQ+K             K + S+LQAKE+ENDVL KRLNDLEQNS+PSLRKAL+DV
Sbjct: 61   SDLVSQLKGLHKRNAELEEDNKKLNSRLQAKEVENDVLQKRLNDLEQNSIPSLRKALKDV 120

Query: 569  AMEKDAAVTAREDFSAQLRMVKKRLKEAEEEQYRTEEDAAALRAELNSLQQQAIMNPLGG 748
            A+EKDAAV ARED SAQLR VK+RLKEAEEEQYR EEDAAALRAELNS+QQQA+M  LG 
Sbjct: 121  AIEKDAAVVAREDLSAQLRTVKRRLKEAEEEQYRAEEDAAALRAELNSIQQQAMMGTLGS 180

Query: 749  ISSMGISQDHFQSMEKELANXXXXXXXXXXXXXXXXRILAEEQSRNSLLIVEKQELEERL 928
            I+SMG S DH Q++E+ELA+                + LAEEQ++NS L+ EKQ LEE++
Sbjct: 181  ITSMGNSPDHIQALERELASLKSQLQQESLLRHQEQQRLAEEQAQNSTLMSEKQGLEEKI 240

Query: 929  AALSKKTSEAMDE-AANKELSKEDKDRLEKQLHDMAVMVERLENSRQKLLMEIDSQSSEI 1105
            AA++KKTS+A  E AA +  S EDK++LEKQLHDMAV VERLE+SRQKLLMEIDSQSS I
Sbjct: 241  AAITKKTSDAASEKAAWETFSLEDKEKLEKQLHDMAVAVERLESSRQKLLMEIDSQSSVI 300

Query: 1106 ERLFEENYNISASYEEATAVVVQWQNQVKDCLRQNEELRGLLDKLRTEKTSILPMGNAEV 1285
            E LFEEN N+S+SY++A  VVV W+NQVKDCL+QNEELRG+L+KLR E+TS+LP  N E+
Sbjct: 301  ESLFEENSNLSSSYQDAMGVVVHWENQVKDCLKQNEELRGMLNKLRAEQTSLLP--NNEI 358

Query: 1286 QSRFFEAEKDRGNVVGAKVYTDEYLLLEGQLAKEQGRAEELSAEVMKLSAQLQHAVQAYN 1465
                 E  KD GN  G + YT E L L+GQLAKEQ R E LSAEVM+L AQLQ A  AYN
Sbjct: 359  PFSLSEGNKDGGNNTGPQAYTTEILFLKGQLAKEQSRVEALSAEVMQLGAQLQQATHAYN 418

Query: 1466 GLARMYKPVFRNIESSLMKMKQDGSVTVQ 1552
            GLAR+YKPV +NIE SL+KMKQDG VTVQ
Sbjct: 419  GLARLYKPVLQNIERSLIKMKQDGPVTVQ 447


>ref|XP_002520502.1| conserved hypothetical protein [Ricinus communis]
            gi|223540344|gb|EEF41915.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 450

 Score =  511 bits (1317), Expect = e-142
 Identities = 276/447 (61%), Positives = 341/447 (76%), Gaps = 1/447 (0%)
 Frame = +2

Query: 212  ASHHATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQSGGQLSESDIS 391
            A+HHA+LGRRTLEEIRQKRAAERLSK  SGPDL  +S    + G+ +S+SG +LSE+D+S
Sbjct: 3    ANHHASLGRRTLEEIRQKRAAERLSKTYSGPDLSKASVSNDNAGMKKSESGNRLSETDVS 62

Query: 392  GLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIENDVLHKRLNDLEQNSVPSLRKALRDVA 571
            GLVSQ+K             K +  K+Q K++END L KRLNDLEQN+VPSLRKAL+DVA
Sbjct: 63   GLVSQLKDLQKKNADLEESNKMLSMKIQTKDVENDSLVKRLNDLEQNTVPSLRKALKDVA 122

Query: 572  MEKDAAVTAREDFSAQLRMVKKRLKEAEEEQYRTEEDAAALRAELNSLQQQAIMNPLGGI 751
            MEKDAAV ARED S QLR +KKRLKEAEEEQYR EEDAA+LRAELNS+QQQA+ NPLGGI
Sbjct: 123  MEKDAAVVAREDLSTQLRTLKKRLKEAEEEQYRAEEDAASLRAELNSIQQQAMSNPLGGI 182

Query: 752  SSMGISQDHFQSMEKELANXXXXXXXXXXXXXXXXRILAEEQSRNSLLIVEKQELEERLA 931
            +S+GIS D  QS+EKELA+                  LA+E +  S L+ EKQELEE+LA
Sbjct: 183  TSIGISPDQVQSLEKELASLKSNLQQESSLRQQEQHRLAQELAWASTLMSEKQELEEKLA 242

Query: 932  ALSKKTSEAMDEAA-NKELSKEDKDRLEKQLHDMAVMVERLENSRQKLLMEIDSQSSEIE 1108
            A+SK+  E + E   +K  S E+K++LEKQLHD+AV VERLE+SRQKLL EIDSQSSEIE
Sbjct: 243  AISKRAPEEVSEKVFHKGFSVEEKEKLEKQLHDLAVAVERLESSRQKLLEEIDSQSSEIE 302

Query: 1109 RLFEENYNISASYEEATAVVVQWQNQVKDCLRQNEELRGLLDKLRTEKTSILPMGNAEVQ 1288
            +LFEEN N+S+SY+EA ++  QW+NQ+KDCL+QNEELRG+L K+R E+T++L     E+ 
Sbjct: 303  KLFEENSNLSSSYQEAVSIGKQWENQLKDCLKQNEELRGVLVKMRMEQTNMLSSSGRELL 362

Query: 1289 SRFFEAEKDRGNVVGAKVYTDEYLLLEGQLAKEQGRAEELSAEVMKLSAQLQHAVQAYNG 1468
             +  E+  +  N  G++ YT E L L G+LAKEQ RAE LSAEV++LSA+LQ A QAYNG
Sbjct: 363  RKPTESYSNGVNETGSQAYTTEVLSLRGELAKEQNRAEALSAEVLQLSAKLQEATQAYNG 422

Query: 1469 LARMYKPVFRNIESSLMKMKQDGSVTV 1549
            LAR+YKPV RNIE+SL+KMKQDG VTV
Sbjct: 423  LARLYKPVLRNIENSLIKMKQDGPVTV 449


>ref|XP_002299845.1| predicted protein [Populus trichocarpa] gi|222847103|gb|EEE84650.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  493 bits (1269), Expect = e-137
 Identities = 273/448 (60%), Positives = 333/448 (74%)
 Frame = +2

Query: 209  MASHHATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQSGGQLSESDI 388
            M + HA+LGRRTLEEIRQKRAAERLSKASSGPDL     P  + G+ +S+SG +LSE+DI
Sbjct: 1    MEALHASLGRRTLEEIRQKRAAERLSKASSGPDLTKIPTPNDNAGMRKSESGNRLSETDI 60

Query: 389  SGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIENDVLHKRLNDLEQNSVPSLRKALRDV 568
             GLVSQ+K               +  KLQ K++EN+ L KRLNDLEQN+VPSLRKALR+V
Sbjct: 61   GGLVSQLKDLQKRNADLEESNGILSLKLQTKDVENETLQKRLNDLEQNTVPSLRKALREV 120

Query: 569  AMEKDAAVTAREDFSAQLRMVKKRLKEAEEEQYRTEEDAAALRAELNSLQQQAIMNPLGG 748
            AMEKDAAV +RED SAQLR +KKRLKEAEEEQYR EEDAA LRAELNS+Q+QA+ N  G 
Sbjct: 121  AMEKDAAVVSREDLSAQLRTLKKRLKEAEEEQYRAEEDAAVLRAELNSMQRQAMSNHPGD 180

Query: 749  ISSMGISQDHFQSMEKELANXXXXXXXXXXXXXXXXRILAEEQSRNSLLIVEKQELEERL 928
            ISSM +S D  Q +EKELA                 + LAEEQSR S L  EKQ+L E+L
Sbjct: 181  ISSMSVSHDQVQRLEKELAGLKSEFQQVSLLRQQEQQRLAEEQSRTSALTSEKQQLVEKL 240

Query: 929  AALSKKTSEAMDEAANKELSKEDKDRLEKQLHDMAVMVERLENSRQKLLMEIDSQSSEIE 1108
            AALS+  S A+ +   K +  EDK++LEKQLHDMA+ VERLE+SRQKLLMEIDSQSSEIE
Sbjct: 241  AALSRTVSGALLQKFPK-VFVEDKEKLEKQLHDMALAVERLESSRQKLLMEIDSQSSEIE 299

Query: 1109 RLFEENYNISASYEEATAVVVQWQNQVKDCLRQNEELRGLLDKLRTEKTSILPMGNAEVQ 1288
            +LFEEN ++S+S +EAT++  QW+NQ+KDCL++NEELR +LDKLRTE+ ++L   + E+ 
Sbjct: 300  KLFEENSSLSSSCQEATSIAKQWENQLKDCLKKNEELRVMLDKLRTEQANLL-SNDREIL 358

Query: 1289 SRFFEAEKDRGNVVGAKVYTDEYLLLEGQLAKEQGRAEELSAEVMKLSAQLQHAVQAYNG 1468
                E  +D     G++ +  E L L+G LAKEQ RAE LSAEVM+LSA+LQ A QAYNG
Sbjct: 359  GGSAERHRDGVTETGSQAHATEILSLKGHLAKEQSRAEALSAEVMQLSAELQQATQAYNG 418

Query: 1469 LARMYKPVFRNIESSLMKMKQDGSVTVQ 1552
            LAR+YKPV RNIESSL+KMKQDG+V VQ
Sbjct: 419  LARLYKPVLRNIESSLIKMKQDGTVIVQ 446


>ref|XP_002864610.1| hypothetical protein ARALYDRAFT_919132 [Arabidopsis lyrata subsp.
            lyrata] gi|297310445|gb|EFH40869.1| hypothetical protein
            ARALYDRAFT_919132 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  479 bits (1232), Expect = e-132
 Identities = 262/447 (58%), Positives = 327/447 (73%)
 Frame = +2

Query: 209  MASHHATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQSGGQLSESDI 388
            M SHHA+LGRRTLEEIRQKRAA+RLSK SSGPDL    NP     I +S+SG +LSE+D+
Sbjct: 1    MDSHHASLGRRTLEEIRQKRAAQRLSKTSSGPDLSEIPNPADFPVIRKSESGNRLSETDV 60

Query: 389  SGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIENDVLHKRLNDLEQNSVPSLRKALRDV 568
              L SQ+K             K + SKLQ KE+EN+ L  RLN LEQN+VPSLRKAL+++
Sbjct: 61   GALYSQLKELQKKNADMEERNKILSSKLQTKEVENESLETRLNVLEQNTVPSLRKALKEI 120

Query: 569  AMEKDAAVTAREDFSAQLRMVKKRLKEAEEEQYRTEEDAAALRAELNSLQQQAIMNPLGG 748
            AMEKDAAV  RED SAQ+R +K+R+KEAEEEQYR EEDAA+LRAELNS+QQQA+     G
Sbjct: 121  AMEKDAAVVLREDLSAQVRTLKRRVKEAEEEQYRAEEDAASLRAELNSIQQQAMGTSFTG 180

Query: 749  ISSMGISQDHFQSMEKELANXXXXXXXXXXXXXXXXRILAEEQSRNSLLIVEKQELEERL 928
            +S MG+S D    +EKE+AN                + LAEEQ+R + L+ EKQELE+++
Sbjct: 181  LSPMGVSSDQLPILEKEMANLKLELQKESVLRQQEQQRLAEEQTRVASLMSEKQELEQKI 240

Query: 929  AALSKKTSEAMDEAANKELSKEDKDRLEKQLHDMAVMVERLENSRQKLLMEIDSQSSEIE 1108
            + LS + SE + E+  K LS EDK++LEKQLHDMAV +ERLE+SRQKLLMEID+QSSEIE
Sbjct: 241  SVLSSRASE-VSESGQKALSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIE 299

Query: 1109 RLFEENYNISASYEEATAVVVQWQNQVKDCLRQNEELRGLLDKLRTEKTSILPMGNAEVQ 1288
            RLFEEN N+SASY+E+  V  QW+NQVK+CL+QN ELR +LDKLRTE+ S L   ++E++
Sbjct: 300  RLFEENSNLSASYQESINVSNQWENQVKECLKQNIELREVLDKLRTEQASALSRKSSEIE 359

Query: 1289 SRFFEAEKDRGNVVGAKVYTDEYLLLEGQLAKEQGRAEELSAEVMKLSAQLQHAVQAYNG 1468
            +             G+  +  E L L+G+LAKEQ R E LSA+V++LSAQLQ A QAYNG
Sbjct: 360  AN------------GSHSHGTETLSLKGELAKEQSRVESLSAQVLQLSAQLQQATQAYNG 407

Query: 1469 LARMYKPVFRNIESSLMKMKQDGSVTV 1549
            L R+YKPV RNIESSL+K+KQDGSVTV
Sbjct: 408  LMRVYKPVLRNIESSLIKLKQDGSVTV 434


>ref|NP_851219.1| myosin heavy chain-related protein [Arabidopsis thaliana]
            gi|19310501|gb|AAL84984.1| AT5g59210/mnc17_100
            [Arabidopsis thaliana] gi|21360403|gb|AAM47317.1|
            AT5g59210/mnc17_100 [Arabidopsis thaliana]
            gi|332009774|gb|AED97157.1| myosin heavy chain-related
            protein [Arabidopsis thaliana]
          Length = 434

 Score =  474 bits (1220), Expect = e-131
 Identities = 261/447 (58%), Positives = 323/447 (72%)
 Frame = +2

Query: 209  MASHHATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQSGGQLSESDI 388
            M SHHA+LGRRTLEEIRQKRAA+RLSKASSGPDL    NP     I +S+SG +LSE+D+
Sbjct: 1    MESHHASLGRRTLEEIRQKRAAQRLSKASSGPDLSEIPNPADFPVIRKSESGNRLSETDV 60

Query: 389  SGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIENDVLHKRLNDLEQNSVPSLRKALRDV 568
              L SQ+K             K + SKLQ KE+EN+ L  RLN LEQN+VPSLRKAL+++
Sbjct: 61   GALYSQLKELQKKNAEMEERNKILSSKLQTKEVENESLETRLNVLEQNTVPSLRKALKEI 120

Query: 569  AMEKDAAVTAREDFSAQLRMVKKRLKEAEEEQYRTEEDAAALRAELNSLQQQAIMNPLGG 748
            AMEKDAAV  RED SAQ+R +K+R+ +AEEEQYR EEDAA+LRAELNS+QQQA+ N   G
Sbjct: 121  AMEKDAAVVLREDLSAQVRTLKRRVNQAEEEQYRAEEDAASLRAELNSIQQQAMGNSFAG 180

Query: 749  ISSMGISQDHFQSMEKELANXXXXXXXXXXXXXXXXRILAEEQSRNSLLIVEKQELEERL 928
            +S MG+S D    +EKE+AN                  LAEEQ+R + L+ EKQELE+++
Sbjct: 181  MSPMGVSPDQLPILEKEMANLKLELQKESVLRQQEQHRLAEEQTRVASLMSEKQELEQKI 240

Query: 929  AALSKKTSEAMDEAANKELSKEDKDRLEKQLHDMAVMVERLENSRQKLLMEIDSQSSEIE 1108
            + LS + SE + E+  K  S EDK++LEKQLHDMAV +ERLE+SRQKLLMEID+QSSEIE
Sbjct: 241  SVLSSRASE-VSESGQKVFSVEDKEKLEKQLHDMAVALERLESSRQKLLMEIDNQSSEIE 299

Query: 1109 RLFEENYNISASYEEATAVVVQWQNQVKDCLRQNEELRGLLDKLRTEKTSILPMGNAEVQ 1288
            +LFEEN N+SASY+E+  +  QW+NQVK+CL+QN ELR +LDKLRTE+      G +E  
Sbjct: 300  KLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRGPSE-- 357

Query: 1289 SRFFEAEKDRGNVVGAKVYTDEYLLLEGQLAKEQGRAEELSAEVMKLSAQLQHAVQAYNG 1468
               FEA    G          + L L+G+LAKEQ RAE LSA+V++LSAQLQ A QAYNG
Sbjct: 358  ---FEANGSHGT---------DTLSLKGELAKEQSRAESLSAQVLQLSAQLQQATQAYNG 405

Query: 1469 LARMYKPVFRNIESSLMKMKQDGSVTV 1549
            L R+YKPV RNIESSL+K+KQDGSVTV
Sbjct: 406  LMRIYKPVLRNIESSLIKLKQDGSVTV 432


Top