BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000958
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ...   172   9e-41
ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group] g...   163   7e-38
ref|XP_002521749.1| protein with unknown function [Ricinus commu...   162   9e-38
ref|XP_003605368.1| RING finger family protein [Medicago truncat...   159   1e-36
gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indi...   157   4e-36

>ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera]
           gi|297734760|emb|CBI16994.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  172 bits (437), Expect = 9e-41
 Identities = 91/142 (64%), Positives = 102/142 (71%), Gaps = 3/142 (2%)
 Frame = +1

Query: 238 AELKLYQAXXXXXXXXXXXXXXXXXXXXXXRRCRRVDWSSSLQMRAPYPNNNPR---LSE 408
           AELKLYQA                      RR RRVDW+S L+MR+   N+      +SE
Sbjct: 16  AELKLYQAFIFSVPIFFTFILLLLFYLFYLRR-RRVDWAS-LRMRSSMQNDADHASGVSE 73

Query: 409 SGLKKELREMLPIIVFRESFSIRDTQCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLA 588
            GLKKE+REMLPIIVF+ESFS+ DTQCSVCLADYQAEDRLQQIP CGHTFHMDCIDHWLA
Sbjct: 74  LGLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQIPACGHTFHMDCIDHWLA 133

Query: 589 THTTCPLCRLSLLPAAKSDSGP 654
           THTTCPLCRLSL  AA++ + P
Sbjct: 134 THTTCPLCRLSLTAAARTPAEP 155


>ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group]
           gi|113536669|dbj|BAF09052.1| Os02g0557300 [Oryza sativa
           Japonica Group] gi|215695052|dbj|BAG90243.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 233

 Score =  163 bits (412), Expect = 7e-38
 Identities = 100/223 (44%), Positives = 134/223 (60%), Gaps = 5/223 (2%)
 Frame = +1

Query: 241 ELKLYQAXXXXXXXXXXXXXXXXXXXXXXRRCRRVDWSSSLQMRAP--YPNNNPRLSESG 414
           ELKLYQA                      RR RR +W S L+MR       +NPRL E G
Sbjct: 18  ELKLYQAFIFSVPVFFTFVLLLFFYLFYLRR-RRANWQS-LRMRTNNLIRGDNPRL-ECG 74

Query: 415 LKKELREMLPIIVFRESFSIRDTQCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATH 594
           +KKE+REMLP++VF+ESF IR+TQCSVCLADYQ ++RLQ+IP CGHTFH+DCIDHWL+T+
Sbjct: 75  IKKEMREMLPVVVFKESFLIRETQCSVCLADYQPDERLQRIPPCGHTFHIDCIDHWLSTN 134

Query: 595 TTCPLCRLSLLPAAKSDSGPSHNVQEIQAVVMRNEVISEGS--NVEDRRSRSPQSTGR-T 765
           TTCPLCR+SLLP+ K+ S        I  V +  + + E S  +V+ +  R  ++T +  
Sbjct: 135 TTCPLCRVSLLPSPKTAS--------IDPVDLEAQTVEENSSLDVQYQEGRIDENTRQED 186

Query: 766 RVFEQGSCRVRNEEFFCDVWRADEHIEQSEEGTVVPDIEAHGS 894
           +  +QGS    ++        A+E+ E S   T  P +EA GS
Sbjct: 187 QTLQQGSEGPTHQ--------AEENEETSVRVTTEPQVEAEGS 221


>ref|XP_002521749.1| protein with unknown function [Ricinus communis]
           gi|223538962|gb|EEF40559.1| protein with unknown
           function [Ricinus communis]
          Length = 337

 Score =  162 bits (411), Expect = 9e-38
 Identities = 96/191 (50%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
 Frame = +1

Query: 241 ELKLYQAXXXXXXXXXXXXXXXXXXXXXXRRCRRVDWSSSLQMRAPYP-NNNPRLSESGL 417
           ELKLYQA                      RR RRVDW+S L+MRA    ++N   +E GL
Sbjct: 25  ELKLYQAFIFSVPIFFTFVLLFLFYLFYLRR-RRVDWAS-LRMRANLQGSDNIFRAELGL 82

Query: 418 KKELREMLPIIVFRESFSIRDTQCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHT 597
           KKE+REMLPIIV++ESFS++DTQC VCL DYQAEDRLQQIP CGHTFHM CIDHWLA HT
Sbjct: 83  KKEVREMLPIIVYKESFSVKDTQCPVCLGDYQAEDRLQQIPACGHTFHMVCIDHWLANHT 142

Query: 598 TCPLCRLSLL-PAAKSDSGPSHNVQEIQAVVMRNEVISEGSNVEDRRSRSPQSTGRTRVF 774
           TCPLCRLSL+ PA      P++ V+  Q     + V   G     +    P S G +   
Sbjct: 143 TCPLCRLSLVAPAKVPTESPNNQVEAGQ----ESFVAVSGGETSAQSGSGPGSCGESN-- 196

Query: 775 EQGSCRVRNEE 807
            +G    RNE+
Sbjct: 197 SRGLSEPRNED 207


>ref|XP_003605368.1| RING finger family protein [Medicago truncatula]
           gi|355506423|gb|AES87565.1| RING finger family protein
           [Medicago truncatula]
          Length = 226

 Score =  159 bits (402), Expect = 1e-36
 Identities = 88/154 (57%), Positives = 102/154 (66%), Gaps = 6/154 (3%)
 Frame = +1

Query: 238 AELKLYQAXXXXXXXXXXXXXXXXXXXXXXRRCRRVDWSSSLQMRAP------YPNNNPR 399
           AELKLY+A                      R  RRVDWSS ++MR+       + NN   
Sbjct: 23  AELKLYRAFIFSVPIFFTLILLFLFYVFYLRP-RRVDWSS-IRMRSVSVLQHHHNNNATS 80

Query: 400 LSESGLKKELREMLPIIVFRESFSIRDTQCSVCLADYQAEDRLQQIPVCGHTFHMDCIDH 579
            S+ GLKKELREMLPIIV+ ESFS++DTQCSVCL DYQ EDRLQQIP CGHTFHM CID 
Sbjct: 81  TSDLGLKKELREMLPIIVYNESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDL 140

Query: 580 WLATHTTCPLCRLSLLPAAKSDSGPSHNVQEIQA 681
           WL++H+TCPLCRLSLLP AKS    S  + E+QA
Sbjct: 141 WLSSHSTCPLCRLSLLPTAKS----STEISEMQA 170


>gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indica Group]
          Length = 176

 Score =  157 bits (397), Expect = 4e-36
 Identities = 85/172 (49%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
 Frame = +1

Query: 388 NNPRLSESGLKKELREMLPIIVFRESFSIRDTQCSVCLADYQAEDRLQQIPVCGHTFHMD 567
           +NPRL E G+KKE+REMLP++VF+ESF IR+TQCSVCLADYQ ++RLQ+IP CGHTFH+D
Sbjct: 10  DNPRL-ECGIKKEMREMLPVVVFKESFLIRETQCSVCLADYQPDERLQRIPPCGHTFHID 68

Query: 568 CIDHWLATHTTCPLCRLSLLPAAKSDSGPSHNVQEIQAVVMRNEVISEGS--NVEDRRSR 741
           CIDHWL+T+TTCPLCR+SLLP+ K+ S        I  V +  + + E S  +V+ +  R
Sbjct: 69  CIDHWLSTNTTCPLCRVSLLPSPKTAS--------IDPVDLEAQTVEENSSLDVQYQEGR 120

Query: 742 SPQSTGR-TRVFEQGSCRVRNEEFFCDVWRADEHIEQSEEGTVVPDIEAHGS 894
             ++T +  +  +QGS   R++        A+E+ E S   T  P +EA GS
Sbjct: 121 IDENTRQEDQTLQQGSEGPRHQ--------AEENEETSVRVTTEPQVEAEGS 164