BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000956
         (6581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   674   0.0  
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   664   0.0  
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   661   0.0  
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   649   0.0  
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   633   e-178

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  674 bits (1740), Expect = 0.0
 Identities = 403/1188 (33%), Positives = 604/1188 (50%), Gaps = 14/1188 (1%)
 Frame = -1

Query: 3728 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXFAVP 3549
            M I  WNC+G+G    V+Q++ L+   + D + ++ETK ++  +            F V 
Sbjct: 1    MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 3548 AQGLSGGLAILWKED-VELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVW 3372
              G +GGL + WKE+ +   ++  S+N + G + +      W F  +YG P   N++K W
Sbjct: 61   CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVR-WRFVGIYGWPEEENKHKTW 119

Query: 3371 AELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGP 3192
            A +K +     GP    GDFN I S DEK GG SR  +++  F + +++  L DL F G 
Sbjct: 120  ALIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQ 179

Query: 3191 KYTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFINLAKKEEKL 3012
             +TW   R P   I ERLDR + +  WL  FP A I       SDH ++ +     E  +
Sbjct: 180  WHTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEG-M 238

Query: 3011 PRP----FKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFG 2844
            PR     F F   WL  +TC E +  AWN+           +K+    ++L  W+K  FG
Sbjct: 239  PRRRAGGFWFETFWLLDDTCEEVVRGAWNAAE----GGRICEKLGAVARELQGWSKKTFG 294

Query: 2843 NIFTNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGA 2664
            ++   I+A +  L     +  SI ++ +   L+ EL E + K E +W  +S  + +KDG 
Sbjct: 295  SLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGD 354

Query: 2663 RNTKFFHLSTIFXXXXXXXXXXXXXEGDWKEGRNEVGASLNQYFQGIFTSDHPHRND--E 2490
            RNT +FH                   G W+    E+   + +YFQ IFTS  P  ND  E
Sbjct: 355  RNTSYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQE 414

Query: 2489 ILNLFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDV 2310
            +L      +T   N+I+    + EEI+  +  M   K+PGPDG   IFYQ+ W IIG +V
Sbjct: 415  VLQHVKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEV 474

Query: 2309 IGLVKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKG 2130
               V    H  S    +N T+IALIPK+ +P   S+FRPISLCN  YKI SK +  RLK 
Sbjct: 475  FNFVSSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKR 534

Query: 2129 LINKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWT 1950
             +  I +  Q AF+ GR I DN  +A E+FH MK   +  +G +A+K+DM+KAYDRVEW 
Sbjct: 535  FLPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWG 594

Query: 1949 FFDSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIA 1770
            F   +   +GF+ +W +++  CV+TVS+  ++NG       P RG+RQGDPLSP+LFI+ 
Sbjct: 595  FLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILV 654

Query: 1769 SEALSRMIAKAEQEEEIHGIKIKRNSPALTHLLYADDLILFTKANMVESGNLKRILDGYC 1590
            ++A S+M+ +    +EIHG K  RN P ++HLL+ADD +LFT+A   E   +  IL+ Y 
Sbjct: 655  ADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYE 714

Query: 1589 EASGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDY 1410
             ASGQK+N+EK+ + FSR V+  +K  L     +R       YLG+P +  R K   F  
Sbjct: 715  AASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRE 774

Query: 1409 LVDKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWW 1230
            L+D++  K++GW+ K+LS+AG+  LI+AV+Q+ P Y M  Y LPV+   +I  A   FWW
Sbjct: 775  LLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWW 834

Query: 1229 VGKEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFS 1050
             GK   + +H + WE +C+PK +GG+G +     N A+L K  W+   + +SL +R M +
Sbjct: 835  GGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSA 894

Query: 1049 IYGKHWIGDVK--KPPDKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGK 876
             Y  H  GDV+  +     SY W+ I    + +  GLIW +G+G  I     PW+     
Sbjct: 895  KYYPH--GDVRYARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVG---- 948

Query: 875  PSTLEELG---VAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDN 705
                +E G    +A      VV DL   ++  W+   +  H N    + IL I +     
Sbjct: 949  ----DEEGRFIKSARVEGLEVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTR-C 1003

Query: 704  SPDKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKL 525
              D++ W   + G  SVK+ Y   K     G +    H     +W   +   ++ FLW+ 
Sbjct: 1004 LQDELTWAYSKDGTYSVKTAYMLGK-----GGNLDDFHRVWNILWSLNVSPKVRHFLWRA 1058

Query: 524  YMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVW--FGSQAGLRVHKD 351
                LP   VL  R +  +  CP C +E E+  HLF+ C     +W   GS   L   +D
Sbjct: 1059 CTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIED 1118

Query: 350  QQTSIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFEN 207
            +        D  + W    D ++   G +I   +  +W  RN   FE+
Sbjct: 1119 E-----AMCDTLVRW-SQMDAKVVQKGCYI---LWNVWVERNRRVFEH 1157


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  664 bits (1712), Expect = 0.0
 Identities = 393/1198 (32%), Positives = 609/1198 (50%), Gaps = 6/1198 (0%)
 Frame = -1

Query: 3728 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXFAVP 3549
            M I  WNCRG+G   +V+Q++    +F+ DI+ ++ET  ++  +            F V 
Sbjct: 1    MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60

Query: 3548 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 3369
            + G +GGL + WKE+V   ++  S++ + G + +    + W F  VYG      ++  W+
Sbjct: 61   SVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVED--GNKKWRFVGVYGWAKEEEKHLTWS 118

Query: 3368 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3189
             L+ +      P  L GDFN I S  EK GG +R+ + M  F   ++ L L DLG+ G  
Sbjct: 119  LLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVGTW 178

Query: 3188 YTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFINL--AKKEEK 3015
            YTW   R P   I ERLDR L +  WL  +P++         SDH ++ +    A +   
Sbjct: 179  YTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRPRG 238

Query: 3014 LPRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIF 2835
              R   F   WL  + C   + ++W +   E+       ++    + L  W+   F N+ 
Sbjct: 239  KTRRLHFETSWLLDDECEAVVRESWENSEGEVMTG----RVASMGQCLVRWSTKKFKNLS 294

Query: 2834 TNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 2655
              I+  +  L    + P S S   +   L+ +L E + K E +W  +S  + +KDG +NT
Sbjct: 295  KQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKDGDKNT 354

Query: 2654 KFFHLSTIFXXXXXXXXXXXXXEGDWKEGRNEVGASLNQYFQGIFTSDHPH--RNDEILN 2481
            K+FH                   G W+E  + +      YF  IFTS +P     + +++
Sbjct: 355  KYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMS 414

Query: 2480 LFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGL 2301
            +  P +T   N  +    + +EI   +++M   K+PGPDG   IFYQ+ W I+G DV   
Sbjct: 415  VIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGDDVTSF 474

Query: 2300 VKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLIN 2121
            + +  H  S    +N T+IALIPK+ NP  A++FRPI+LCN  YK++SK +  RLK  + 
Sbjct: 475  ISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIVMRLKSFLP 534

Query: 2120 KIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFFD 1941
            +I+S  Q AF+ GR I DN  +A EVFH+MKN     +G IA+K+DM+KAYDRVEW F  
Sbjct: 535  EIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLR 594

Query: 1940 SIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASEA 1761
             +   +GF+ +W ++I + VS+V++  ++NGS     VP RG+RQGDPLSPYLFI+ ++A
Sbjct: 595  KLLLTMGFDGRWVNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADA 654

Query: 1760 LSRMIAKAEQEEEIHGIKIKRNSPALTHLLYADDLILFTKANMVESGNLKRILDGYCEAS 1581
             S+MI +  Q++++HG K  R+ P ++HL +ADD +LFT+AN  E   +  IL+ Y  AS
Sbjct: 655  FSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELAS 714

Query: 1580 GQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLVD 1401
            GQK+N+EK+ + +SR V+  QK  L     +R     + YLG+P +  R K   FD L+D
Sbjct: 715  GQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLID 774

Query: 1400 KIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVGK 1221
            +I  K++GW+ K+LS+AG+  L+++V+Q+ P Y M  Y  PV    KI  A   FWW   
Sbjct: 775  RIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSS 834

Query: 1220 EQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFSIYG 1041
            +  + +H   W+ +C  K  GG+G +     N A+L +  W+   + QSL  R M + Y 
Sbjct: 835  DTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYF 894

Query: 1040 KHWIGDVKKPP--DKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPST 867
             +   D    P    +SY W  I  +   +  G+IW +GNG+ I+   DPW+   G    
Sbjct: 895  PNC--DFLNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEG---- 948

Query: 866  LEELGVAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSPDKMK 687
                  + P      VS+L   D+  W  + L   LN    R IL   +      PD++ 
Sbjct: 949  -GRFLTSTPHASIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATP-VPDELT 1006

Query: 686  WGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKLYMQILP 507
            W   +    SVK+ Y   K     G +    H     IW   +   ++ FLW+L    LP
Sbjct: 1007 WAFTKDATYSVKTAYMIGK-----GGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLP 1061

Query: 506  TGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRVHKDQQTSIRER 327
               +L  R +  D  CP+   E+E+  H  F C  +R +W  S       +D   S+   
Sbjct: 1062 VRSLLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSM--- 1118

Query: 326  LDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFENRKTNCERLIRESCKLAEK 153
             DL ++W  S D +LR+ G ++A     IW  RN   F N+ T    L++   +L E+
Sbjct: 1119 CDLLVSW-RSLDGKLRIKGAYLAWC---IWGERNAKIFNNKTTPSSVLMQRVSRLVEE 1172


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  661 bits (1705), Expect = 0.0
 Identities = 384/1203 (31%), Positives = 617/1203 (51%), Gaps = 20/1203 (1%)
 Frame = -1

Query: 3728 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXFAVP 3549
            M I +WNC+G+G T  V+ ++++ G +  +++ L ETK  +  +              V 
Sbjct: 1    MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 3548 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 3369
              G SGGLA++WK+ V+++VL S +  +   L   +  + ++ T +YG P+   R ++W 
Sbjct: 61   PIGKSGGLALMWKDSVQIKVLQSDKRLIDALL--IWQDKEFYLTCIYGEPVQAERGELWE 118

Query: 3368 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3189
             L  +     GPW L GDFN +    EKIGG +R   S  EF   +N  GL ++   G +
Sbjct: 119  RLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQ 178

Query: 3188 YTWSNNRKPYDHILE-RLDRALATPEWLASFPNAQIRTWANAISDHVSLFINLAKKEEKL 3012
            ++W  NR   D +++ RLDR +A   W+  FP A+        SDH  L  NL     + 
Sbjct: 179  FSWYGNRN--DELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRK 236

Query: 3011 PRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIFT 2832
               FK+   W++ E   + +   W+  S +  ++  ++K+    ++++ W +    +   
Sbjct: 237  WAGFKYDKRWVQREGFKDLLCNFWSQQSTKT-NALMMEKIASCRREISKWKRVSKPSSAV 295

Query: 2831 NIKATQANLDTVLSK-PFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 2655
             I+  Q  LD    + PF   +  +  +LK EL + Y+ EE FW++KS   W+++G RNT
Sbjct: 296  RIQELQFKLDAATKQIPF---DRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNT 352

Query: 2654 KFFHLSTIFXXXXXXXXXXXXXEGDWKEGRNEVGASLNQYFQGIFTSDHPHRNDEILNLF 2475
            K+FH +T               EG       ++G     YF+ +F S+      E L   
Sbjct: 353  KYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENL 412

Query: 2474 HPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGLVK 2295
             P ++ + N  + A  T EE+      +  +K PGPDG  G  YQ+ W+ +G  +  +V+
Sbjct: 413  TPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQ 472

Query: 2294 DFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLINKI 2115
             FF  GS+   +N+T+I LIPKI   +  + FRPISLCN  YK+I K++ANRLK ++  +
Sbjct: 473  AFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSL 532

Query: 2114 VSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFFDSI 1935
            +S  Q AF+KGR I DN+ +A E+ H + +    +E +IA+K D++KAYDRVEW F +  
Sbjct: 533  ISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKA 592

Query: 1934 FEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASEALS 1755
               LGF   W  +I +CV +V +QV++NG+P    +P RG+RQGDPLSPYLF+I +E L 
Sbjct: 593  MRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLV 652

Query: 1754 RMIAKAEQEEEIHGIKIKRNSPALTHLLYADDLILFTKANMVESGNLKRILDGYCEASGQ 1575
            +M+  AEQ+ +I G+K+ R +P ++HLL+ADD + + K N    G + RI++ Y  ASGQ
Sbjct: 653  KMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQ 712

Query: 1574 KVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLVDKI 1395
            +VN+ K+SI+F ++++  ++  +KR   +   G + +YLG+P      K     YL D++
Sbjct: 713  RVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRL 772

Query: 1394 HNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVGKEQ 1215
              K+ GW++  LS  G+  L++AV  + P Y MS + +P + C +I+    +FWW  K++
Sbjct: 773  GKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKE 832

Query: 1214 SQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTMFSIYGKH 1035
             + +H   W H+ +PK VGGLG ++    NIA+L K  W+  T+  SL  +   S Y   
Sbjct: 833  GRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSK 892

Query: 1034 WIGDVKKPP--DKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPSTLE 861
               D    P   + S+ WK I+     I  G+   IGNG +I+   DPW+    KP+   
Sbjct: 893  --SDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWI--GAKPAKAA 948

Query: 860  ELGVAAPTLDS------SVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSP 699
            +    +  +         VV DL LPD   W+   +SL         IL ++   ++ + 
Sbjct: 949  QAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKE-TR 1007

Query: 698  DKMKWGQDRGGNISVKSVY-------NFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQM 540
            D+  W   R G+ SVKS Y       N      E+ Q S       + IW+  +P  I  
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL--DPIFQQIWKLDVPPKIHH 1065

Query: 539  FLWKLYMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRV 360
            FLW+     L     LA R +  + SC  C    E+  HL F C + R+ W  S      
Sbjct: 1066 FLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPP 1125

Query: 359  HKDQQTSIRERLDLFLTWCCSPDEELRLAGTHIAI---LMQKIWQARNHLKFENRKTNCE 189
              +   S+   +   L+   S  EE      H A+   ++ ++W+ RN L F+ R+    
Sbjct: 1126 GGEWAESLFRNMHHVLSVHKSQPEE----SDHHALIPWILWRLWKNRNDLVFKGREFTAP 1181

Query: 188  RLI 180
            ++I
Sbjct: 1182 QVI 1184


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  649 bits (1674), Expect = 0.0
 Identities = 405/1255 (32%), Positives = 627/1255 (49%), Gaps = 14/1255 (1%)
 Frame = -1

Query: 3728 MTIHAWNCRGIGTTTAVQQIKDLIGKFSVDIVCLAETKASQEGIGXXXXXXXXXXXFAVP 3549
            M I  WNCRG+G    V+Q++     ++ DI+ L+ET  ++               F V 
Sbjct: 1    MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 3548 AQGLSGGLAILWKEDVELEVLGSSRNQVTGKLSNYFHTEPWFFTFVYGNPIAHNRNKVWA 3369
            ++G +GGL + W+E++   ++  S++ + G + +    + W F  +YG      ++  W+
Sbjct: 61   SRGRAGGLCVFWREELSFSLVSFSQHHICGDIDD--GAKKWRFVGIYGWAKEEEKHHTWS 118

Query: 3368 ELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSFINELGLVDLGFKGPK 3189
             ++ +   +  P  + GDFN I S +EK GG  R+ + M +F   +++L L DLG+ G  
Sbjct: 119  LMRFLCEDLSRPILMGGDFNEIMSYEEKEGGADRVRRGMYQFRETMDDLFLRDLGYNGVW 178

Query: 3188 YTWSNNRKPYDHILERLDRALATPEWLASFPNAQIRTWANAISDHVSLFI--NLAKKEEK 3015
            +TW         I ERLDR + +P W   +PN  +       SDH+++ +  N  ++   
Sbjct: 179  HTWERGNSLSTCIRERLDRFVCSPSWATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTS 238

Query: 3014 LPRPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKMEKTTKDLALWNKHVFGNIF 2835
              R F F   WL   TC ETI  AW   + +    +   +++     L  W+    GNI 
Sbjct: 239  KQRRFFFETSWLLDPTCEETIRDAWTDSAGD----SLTGRLDLLALKLKSWSSEKGGNIG 294

Query: 2834 TNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEEDFWKQKSSQSWLKDGARNT 2655
              +   +++L  +  +P S +N      L+ +L E + K+E  W  +S    ++DG RNT
Sbjct: 295  KQLGRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLRSRAMEVRDGDRNT 354

Query: 2654 KFFHLSTIFXXXXXXXXXXXXXEGDWKEGRNEVGASLNQYFQGIFTSDHPH--RNDEILN 2481
            K+FH                   G W E  +++      YF  IFTS +P   + +++L 
Sbjct: 355  KYFHHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLC 414

Query: 2480 LFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQGIFYQKCWDIIGPDVIGL 2301
               P +T   N  +    + EE++  + +M   K+PGPDG   IFYQK W IIG DV   
Sbjct: 415  CVDPVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQF 474

Query: 2300 VKDFFHQGSLNPR-LNETHIALIPKIANPDHASKFRPISLCNFGYKIISKILANRLKGLI 2124
            V    H GS++P  +N T+IALIPK+ NP   ++FRPI+LCN  YK++SK L  RLK  +
Sbjct: 475  VSSILH-GSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFL 533

Query: 2123 NKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIALKVDMAKAYDRVEWTFF 1944
             ++VS  Q AF+ GR I DN  +A EVFH+MK+     +G IA+K+DM+KAYDRVEW F 
Sbjct: 534  PRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFL 593

Query: 1943 DSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGVRQGDPLSPYLFIIASE 1764
              +   +GF+ +W ++I  CVS+VS+  ++NG       P RG+R GDPLSPYLFI+ ++
Sbjct: 594  RKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIAD 653

Query: 1763 ALSRMIAKAEQEEEIHGIKIKRNSPALTHLLYADDLILFTKANMVESGNLKRILDGYCEA 1584
            A S+MI K  QE+++HG K  R+ P ++HL +AD  +LFT+A+  E   +  IL+ Y +A
Sbjct: 654  AFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQA 713

Query: 1583 SGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGVPIMLSRKKSEDFDYLV 1404
            SGQK+N++K+ + FS+ V+  QK  L    +++       YLG+P +  R ++  FD L+
Sbjct: 714  SGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLM 773

Query: 1403 DKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVSTCTKIDKACRDFWWVG 1224
            D+I  K++GW+ K+LS+AG+  L+++V+Q+ P Y M  Y LP S   KI  A   FWW  
Sbjct: 774  DRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWWGS 833

Query: 1223 KEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKAATDLQSLWTRTM-FSI 1047
             +  + +H   W+ +C  K  GG+G R  R  N A+L +  W+   +  SL  R M    
Sbjct: 834  SDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKY 893

Query: 1046 YGKHWIGDVKKPPDKASYFWKGIHRTFNDISGGLIWAIGNGNSISALKDPWLYCNGKPST 867
            Y  H   D        SY W+ I  +   +  G++W IGNG ++   +DPW+        
Sbjct: 894  YSNHDFLDAPLGV-STSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWV-------- 944

Query: 866  LEELG---VAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRKILDIKIRPEDNSP- 699
            L+ELG    +    + ++VS+L   D+  W   K+SL    F  R I  I   P  + P 
Sbjct: 945  LDELGRFITSEKHGNLNMVSELIDFDRMEW---KVSLIETVFNERDIKCILSIPLSSLPL 1001

Query: 698  -DKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLTLRHIWRAPLPAYIQMFLWKLY 522
             D++ W   +  + SVK+ Y   K     G +    H     IW   +   ++ FLW+L 
Sbjct: 1002 KDELTWAFTKNAHYSVKTAYMLGK-----GGNLDSFHQAWIDIWSMEVSPKVKHFLWRLG 1056

Query: 521  MQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCEWVRMVWFGSQAGLRVHKDQQT 342
               LP   +L  R +  D  CP    E ES  H  F C ++R +W  S           T
Sbjct: 1057 TNTLPVRSLLKHRHMLDDDLCPRGCGEPESQFHAIFGCPFIRDLWVDSGCDNFRALTTDT 1116

Query: 341  SIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQARNHLKFENRKTNCERLIRESCKL 162
            ++ E     L      D  +R  G  +A +   +W  RN + F    T    L+    +L
Sbjct: 1117 AMTEA----LVNSHGLDASVRTKGAFMAWV---LWSERNSIVFNQSSTPPHILLARVSRL 1169

Query: 161  AEKCYLAYSEEHPYT---NPDLTYDEITLDSVFPIIPNASILINFDASFHRQQGW 6
             E       E   YT    P+     I    V+   P   I +N DAS     GW
Sbjct: 1170 VE-------EHGTYTARIYPNRNCCAIPSARVWAAPPPEVIKLNVDASL-ASAGW 1216


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  633 bits (1633), Expect = e-178
 Identities = 357/1084 (32%), Positives = 570/1084 (52%), Gaps = 18/1084 (1%)
 Frame = -1

Query: 3413 VYGNPIAHNRNKVWAELKDVAPLIPGPWCLFGDFNAISSLDEKIGGRSRITKSMQEFNSF 3234
            +YG+  +  +++ W  ++ +      PW + GDFN I    EK GGR +   +M EF   
Sbjct: 351  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHA 410

Query: 3233 INELGLVDLGFKGPKYTWSNNRKPYD-HILERLDRALATPEWLASFPNAQIRTWANAISD 3057
            + + GL DLGF+G  +TW N+    + +I ERLDRA+A PEW A FP A++       SD
Sbjct: 411  LTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDPRHSD 470

Query: 3056 HVSLFINLAKKEEKLP-----RPFKFFDMWLKHETCMETIEKAWNSISHELPDSNFIKKM 2892
            H  + I L  K + +        F+F   WL+ E   E +++AW+ +S  L        +
Sbjct: 471  HRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAWD-VSAGLQGLPVHASL 529

Query: 2891 EKTTKDLALWNKHVFGNIFTNIKATQANLDTVLSKPFSISNYNKAKKLKDELLEWYDKEE 2712
                  L+ W+ +V G++   +K  +  L+T   +P S     + + L+  L +   + +
Sbjct: 530  AGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVD 589

Query: 2711 DFWKQKSSQSWLKDGARNTKFFHLSTIFXXXXXXXXXXXXXEGDWKEGRNEVGASLNQYF 2532
             +WKQ++  +WL  G RNT FFH S                +G W E   +  A + ++F
Sbjct: 590  IYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFF 649

Query: 2531 QGIFTSDHPHRNDEILNLFHPCITARENEIITAIPTSEEIWGVVKKMGGYKSPGPDGFQG 2352
            + +FTS+    + ++L++    ++   NE + A  T EE+   +  +G  K+PGPDG   
Sbjct: 650  KQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPA 709

Query: 2351 IFYQKCWDIIGPDVIGLVKDFFHQGSLNPRLNETHIALIPKIANPDHASKFRPISLCNFG 2172
             FY+ CWD++G  V   V +    G++    N+  I LIPK+  P+     RPISLCN  
Sbjct: 710  GFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVC 769

Query: 2171 YKIISKILANRLKGLINKIVSPFQGAFIKGRSIGDNVGLACEVFHNMKNMKSKNEGWIAL 1992
            YK++SK+LANRLK ++  ++SP Q AF+ GR I DN+ +A E+ H M+N +S   G+ A 
Sbjct: 770  YKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAF 829

Query: 1991 KVDMAKAYDRVEWTFFDSIFEKLGFNMKWRHMIQQCVSTVSFQVMLNGSPLERFVPERGV 1812
            K+DM+KAYDRVEW+F   +  KLGF+  W ++I +CVSTV++++ +NG   E F P RG+
Sbjct: 830  KLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGL 889

Query: 1811 RQGDPLSPYLFIIASEALSRMIAKAEQEEEIHGIKIKRNSPALTHLLYADDLILFTKANM 1632
            RQGDPLSPYLF++ +E  S +++K E+E  +HGI+I + +P+++HLL+ADD ++  +AN 
Sbjct: 890  RQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANG 949

Query: 1631 VESGNLKRILDGYCEASGQKVNFEKTSIFFSRNVTFRQKFRLKRFWKVRNFGPKDLYLGV 1452
             E+  L+ IL  Y E SGQ +N +K+++ FS N +  +K  +     ++     + YLG+
Sbjct: 950  GEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGL 1009

Query: 1451 PIMLSRKKSEDFDYLVDKIHNKIKGWRAKVLSQAGRTTLIQAVVQSTPLYAMSTYVLPVS 1272
            P+ + R +++ F YL ++I  +I+GW+ K+LS+AG+  LI+AV Q+ P +AM  + L   
Sbjct: 1010 PVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKD 1069

Query: 1271 TCTKIDKACRDFWWVGKEQSQSVHTIGWEHICQPKDVGGLGLRKARDMNIAMLAKLPWKA 1092
             C +I K    +WW  +E+   +H + W  +  PK++GGLG R     N+AMLAK  W+ 
Sbjct: 1070 LCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRL 1129

Query: 1091 ATDLQSLWTRTMFSIYGKHWIGDVKKP--PDKASYFWKGIHRTFNDISGGLIWAIGNGNS 918
              D  SL +R + + Y    +GD  +P      SY W+ I +    +  G+IW +G+G+ 
Sbjct: 1130 IQDPDSLCSRVLRAKYFP--LGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSK 1187

Query: 917  ISALKDPWLYCNGKPSTLEELGVAAPTLDSSVVSDLFLPDKSGWDETKLSLHLNHFICRK 738
            I+   DPW+        +   G    T     V +L  P    WDE  LS          
Sbjct: 1188 INIWADPWIPRGWSRKPMTPRGANLVT----KVEELIDPYTGTWDEDLLSQTFWEEDVAA 1243

Query: 737  ILDIKIRPEDNSPDKMKWGQDRGGNISVKSVYNFLKPKNEIGQSSSCNHLT--------- 585
            I  I +  E    D + W  D  G  +VKS Y   +        + C  ++         
Sbjct: 1244 IKSIPVHVE--MEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDF 1301

Query: 584  LRHIWRAPLPAYIQMFLWKLYMQILPTGDVLAVRKIKGDLSCPFCFKEMESAEHLFFTCE 405
             + +W+  +P  I+ FLW++    L     L  R +  D  C  C +  E A HLFF C+
Sbjct: 1302 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1361

Query: 404  WVRMVWFG-SQAGLRVHKDQQTSIRERLDLFLTWCCSPDEELRLAGTHIAILMQKIWQAR 228
             V+ VW   +   LR   +QQTS +  L       C P+ E     T   + + + W+ R
Sbjct: 1362 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIY---CRPENE----RTSAIVCLWQWWKER 1414

Query: 227  NHLK 216
            N ++
Sbjct: 1415 NEVR 1418



 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = -2

Query: 5914 RMKEDRRFDRVDFWVQIFGLPRDRINEKNVHKVGSTLGKVKGMDLQCSSAFKNPVARVRV 5735
            ++ ED  F  V  WV+   LP   + ++    +G  +G+   MDL+   +      R+++
Sbjct: 11   KLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKI 70

Query: 5734 RMDIRERLLKGIELSTELGE-VLYVSFKYEKLEIFCYFCGCIGHDIHYC 5591
            R+DIR+ L++G+ L     E  L+    YE L  FCY CG +GH    C
Sbjct: 71   RIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLC 119