BLASTX nr result

ID: Coptis25_contig00000954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000954
         (2515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855...   130   2e-27
ref|XP_002524764.1| conserved hypothetical protein [Ricinus comm...   104   1e-19
ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cuc...    94   1e-16
ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223...    94   1e-16
ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-16

>ref|XP_003632306.1| PREDICTED: uncharacterized protein LOC100855240 [Vitis vinifera]
          Length = 196

 Score =  130 bits (327), Expect = 2e-27
 Identities = 89/207 (42%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
 Frame = -2

Query: 2181 METLVVVPQHRNQYYGRNGSYVHDIY-GSPNGGFRDFNCR-FLAREAILSTPLKPCYVAS 2008
            METL+VVPQHRNQYYGR+ ++  D +  SP+  FR+ NCR F +   IL TPLK C    
Sbjct: 1    METLLVVPQHRNQYYGRSKAHGSDRFVSSPSSDFREINCRTFESGAGILPTPLKACTTPV 60

Query: 2007 A------DKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISL-KVGNLEKSFSDDLSYA 1849
            A       + TPSP        HSE  K+ +  G S AI I   +  N EKSF DD SY 
Sbjct: 61   AKGACPLSQKTPSP--------HSEDSKQAKTTGKSSAIAIPFAEASNYEKSFHDDFSYC 112

Query: 1848 ELFAGXXXXXXXXXXXXXXXXXSLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGSCH 1669
            EL+AG                 S+R KR+VSL+LP     +K+H +AKSAP SP      
Sbjct: 113  ELWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLDLPGSAPVIKMHAIAKSAPPSP------ 166

Query: 1668 SRDHFFRSTASDALATKDLRRILNLDI 1588
            +R+ +         ATK+LRRILNL+I
Sbjct: 167  TREPYPSPRDFTDFATKNLRRILNLNI 193


>ref|XP_002524764.1| conserved hypothetical protein [Ricinus communis]
            gi|223535948|gb|EEF37607.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 204

 Score =  104 bits (260), Expect = 1e-19
 Identities = 79/209 (37%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
 Frame = -2

Query: 2181 METLVVVPQHRN-QYYGRNGSY--VHDIYGSPNGGFRDFNCR-FLAREAILSTPLKPCYV 2014
            METLVVV QHRN QYY R  SY      Y SP   FR+ NCR F +   IL TP + C  
Sbjct: 1    METLVVVNQHRNHQYYSRLKSYKPARCGYSSPTSHFREINCRTFESGAGILPTPFRTC-- 58

Query: 2013 ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDDLS------- 1855
                  TP         +       ++ +  + ++PIS+ +     SF D+L        
Sbjct: 59   -----TTPVTHTTPTSTSQKTPPPTIKTHALASSLPISINIPTKGTSFDDELGITGENSP 113

Query: 1854 YAELFAGXXXXXXXXXXXXXXXXXSLRQKRSVSLELPVKEYGLKIHHVAKSAPSSPRGGS 1675
            ++E +AG                 S+R KR+VSLELPV + G+K+H  AKSAPSSP    
Sbjct: 114  FSERWAGPAYSNSPPPSSLPIPKFSMRPKRTVSLELPVCDSGIKVHSFAKSAPSSPTREH 173

Query: 1674 CHSRDHFFRSTASDALATKDLRRILNLDI 1588
              S      S  S   ATK LRRILNLD+
Sbjct: 174  NSSTRELLLSVDS---ATKTLRRILNLDV 199


>ref|XP_004158617.1| PREDICTED: uncharacterized LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 81/209 (38%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
 Frame = -2

Query: 2181 METLVVVPQHRNQYYGRNGSYVHDIYGS-PNGGFRDFNCR-FLAREAILSTPLKPCYVAS 2008
            ME +VV+ QHRNQYY R   +    +GS  +  FR  NCR F +   IL TPLK C  + 
Sbjct: 1    MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACN-SE 59

Query: 2007 ADKMTPSPK-PRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD-----LSYAE 1846
             +   PSPK P     ++SE  K+L     S  IPI  K  N   +F ++      S++E
Sbjct: 60   TEHFYPSPKTPPPCLTSNSENRKQLATM-RSTPIPIKPKSSNQSNAFHEEFYDRSFSFSE 118

Query: 1845 LFAGXXXXXXXXXXXXXXXXXSLRQKRSVSLELPVKEYGLKIHH-VAKSAPSSPRGGSCH 1669
            L+AG                 S+  KR+ SLEL       ++HH  AKSAP SP      
Sbjct: 119  LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNF 177

Query: 1668 SRDHFFRSTASDALATKDLRRILNLDIDN 1582
            S   FF S  S   ATK LRRILNLD+ N
Sbjct: 178  SARFFFHSADS---ATKTLRRILNLDVAN 203


>ref|XP_004140095.1| PREDICTED: uncharacterized protein LOC101223034 [Cucumis sativus]
          Length = 204

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 81/209 (38%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
 Frame = -2

Query: 2181 METLVVVPQHRNQYYGRNGSYVHDIYGS-PNGGFRDFNCR-FLAREAILSTPLKPCYVAS 2008
            ME +VV+ QHRNQYY R   +    +GS  +  FR  NCR F +   IL TPLK C  + 
Sbjct: 1    MEAVVVIEQHRNQYYDRVKPHGPARFGSLRSRDFRGMNCRSFQSGAGILPTPLKACN-SE 59

Query: 2007 ADKMTPSPK-PRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD-----LSYAE 1846
             +   PSPK P     ++SE  K+L     S  IPI  K  N   +F ++      S++E
Sbjct: 60   TEHFYPSPKTPPPCLTSNSENRKQLATM-RSAPIPIKPKSSNQSNAFHEEFYDRSFSFSE 118

Query: 1845 LFAGXXXXXXXXXXXXXXXXXSLRQKRSVSLELPVKEYGLKIHH-VAKSAPSSPRGGSCH 1669
            L+AG                 S+  KR+ SLEL       ++HH  AKSAP SP      
Sbjct: 119  LWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLELARSAPEFEMHHPSAKSAPPSPTRDQNF 177

Query: 1668 SRDHFFRSTASDALATKDLRRILNLDIDN 1582
            S   FF S  S   ATK LRRILNLD+ N
Sbjct: 178  SARFFFHSADS---ATKTLRRILNLDVAN 203


>ref|XP_002302107.1| predicted protein [Populus trichocarpa] gi|222843833|gb|EEE81380.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 80/220 (36%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
 Frame = -2

Query: 2181 METLVVVPQHRNQYYGRNGSYVHDIYG-SPNGGFRDFNCR-FLAREAILSTPLKPCYV-- 2014
            METLVVV QHRNQYY +  S     +G SP+  F+D NCR F +R+ IL TP +      
Sbjct: 1    METLVVVAQHRNQYYTKVRSNGPAKFGTSPSKHFKDINCRTFQSRDGILPTPFQASTTTV 60

Query: 2013 ---------ASADKMTPSPKPRKQFKAHSEGEKRLRNNGTSVAIPISLKVGNLEKSFSDD 1861
                      S    TP P  + QF +H       +    S  I I++ V   E SF +D
Sbjct: 61   TKITSHVPPTSNSPKTPPPAIKSQFNSHPVDNGNFKTISKSSPITINVTVPRKETSFYED 120

Query: 1860 -------LSYAELFAGXXXXXXXXXXXXXXXXXSLR-QKRSVSLELPVKE-YGLKIHHVA 1708
                   L ++E +AG                 S+R  KR+VSL+LPV       +   A
Sbjct: 121  MGFGNENLPFSERWAGPAYSNSPPPSSLPIPKFSMRPPKRTVSLDLPVNHGTDFNVQPTA 180

Query: 1707 KSAPSSPRGGSCHSRDHFFRSTASDALATKDLRRILNLDI 1588
            KSAP+SP      S    F S  S   ATK LRRILNLD+
Sbjct: 181  KSAPASPSREHSPSMKDLFLSADS---ATKTLRRILNLDV 217


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