BLASTX nr result
ID: Coptis25_contig00000946
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000946 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth... 114 1e-23 ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2... 110 1e-22 gb|ABK95302.1| unknown [Populus trichocarpa] 110 1e-22 ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partia... 107 1e-21 ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--t... 107 1e-21 >ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera] gi|297744088|emb|CBI37058.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 114 bits (284), Expect = 1e-23 Identities = 56/89 (62%), Positives = 67/89 (75%) Frame = -1 Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246 V RDNS+K+DIPI +L E+V D+L+NIQQ+LFD AK KRDACIK +TW+EF AL +KK Sbjct: 396 VRRDNSAKIDIPIVNLVEQVKDMLDNIQQNLFDVAKQKRDACIKTVRTWDEFIEALGQKK 455 Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159 MILAPWCD KA+T GE GA KT Sbjct: 456 MILAPWCDEMEVEKDVKARTKGETGAAKT 484 >ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1| predicted protein [Populus trichocarpa] Length = 508 Score = 110 bits (275), Expect = 1e-22 Identities = 54/89 (60%), Positives = 69/89 (77%) Frame = -1 Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246 V RDN++K+DI +LAEKV D+L++IQ+S+FDAAK KRDACI+VAKTW+EFK AL ++K Sbjct: 385 VRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRK 444 Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159 MILAPWCD K +T GE GA K+ Sbjct: 445 MILAPWCDEEEVEKDVKDRTRGEMGAAKS 473 >gb|ABK95302.1| unknown [Populus trichocarpa] Length = 498 Score = 110 bits (275), Expect = 1e-22 Identities = 54/89 (60%), Positives = 69/89 (77%) Frame = -1 Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246 V RDN++K+DI +LAEKV D+L++IQ+S+FDAAK KRDACI+VAKTW+EFK AL ++K Sbjct: 377 VRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRK 436 Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159 MILAPWCD K +T GE GA K+ Sbjct: 437 MILAPWCDEEEVEKDVKDRTRGEMGAAKS 465 >ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partial [Cucumis sativus] Length = 227 Score = 107 bits (266), Expect = 1e-21 Identities = 55/89 (61%), Positives = 62/89 (69%) Frame = -1 Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246 V RDNS K DIP L E+V ++LE+IQQSLFDAAK KRD CI+V TWEEF AL +KK Sbjct: 106 VRRDNSGKKDIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKK 165 Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159 MILAPWCD K +T GE GA KT Sbjct: 166 MILAPWCDEEEVEKDVKTRTKGEMGAAKT 194 >ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--tRNA ligase-like [Cucumis sativus] Length = 511 Score = 107 bits (266), Expect = 1e-21 Identities = 55/89 (61%), Positives = 62/89 (69%) Frame = -1 Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246 V RDNS K DIP L E+V ++LE+IQQSLFDAAK KRD CI+V TWEEF AL +KK Sbjct: 390 VRRDNSGKKDIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKK 449 Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159 MILAPWCD K +T GE GA KT Sbjct: 450 MILAPWCDEEEVEKDVKTRTKGEMGAAKT 478