BLASTX nr result

ID: Coptis25_contig00000946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000946
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   114   1e-23
ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
gb|ABK95302.1| unknown [Populus trichocarpa]                          110   1e-22
ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partia...   107   1e-21
ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--t...   107   1e-21

>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
           gi|297744088|emb|CBI37058.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/89 (62%), Positives = 67/89 (75%)
 Frame = -1

Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246
           V RDNS+K+DIPI +L E+V D+L+NIQQ+LFD AK KRDACIK  +TW+EF  AL +KK
Sbjct: 396 VRRDNSAKIDIPIVNLVEQVKDMLDNIQQNLFDVAKQKRDACIKTVRTWDEFIEALGQKK 455

Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159
           MILAPWCD        KA+T GE GA KT
Sbjct: 456 MILAPWCDEMEVEKDVKARTKGETGAAKT 484


>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = -1

Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246
           V RDN++K+DI   +LAEKV D+L++IQ+S+FDAAK KRDACI+VAKTW+EFK AL ++K
Sbjct: 385 VRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRK 444

Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159
           MILAPWCD        K +T GE GA K+
Sbjct: 445 MILAPWCDEEEVEKDVKDRTRGEMGAAKS 473


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/89 (60%), Positives = 69/89 (77%)
 Frame = -1

Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246
           V RDN++K+DI   +LAEKV D+L++IQ+S+FDAAK KRDACI+VAKTW+EFK AL ++K
Sbjct: 377 VRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRK 436

Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159
           MILAPWCD        K +T GE GA K+
Sbjct: 437 MILAPWCDEEEVEKDVKDRTRGEMGAAKS 465


>ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partial [Cucumis sativus]
          Length = 227

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/89 (61%), Positives = 62/89 (69%)
 Frame = -1

Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246
           V RDNS K DIP   L E+V ++LE+IQQSLFDAAK KRD CI+V  TWEEF  AL +KK
Sbjct: 106 VRRDNSGKKDIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKK 165

Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159
           MILAPWCD        K +T GE GA KT
Sbjct: 166 MILAPWCDEEEVEKDVKTRTKGEMGAAKT 194


>ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--tRNA ligase-like
           [Cucumis sativus]
          Length = 511

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/89 (61%), Positives = 62/89 (69%)
 Frame = -1

Query: 425 VCRDNSSKMDIPIGDLAEKVGDILENIQQSLFDAAKDKRDACIKVAKTWEEFKTALREKK 246
           V RDNS K DIP   L E+V ++LE+IQQSLFDAAK KRD CI+V  TWEEF  AL +KK
Sbjct: 390 VRRDNSGKKDIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKK 449

Query: 245 MILAPWCDXXXXXXXXKAKTMGENGACKT 159
           MILAPWCD        K +T GE GA KT
Sbjct: 450 MILAPWCDEEEVEKDVKTRTKGEMGAAKT 478


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