BLASTX nr result
ID: Coptis25_contig00000937
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000937 (1359 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi... 223 7e-56 ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi... 219 1e-54 gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum] 203 1e-49 gb|ABK93977.1| unknown [Populus trichocarpa] 196 1e-47 ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi... 196 2e-47 >ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera] Length = 300 Score = 223 bits (569), Expect = 7e-56 Identities = 137/316 (43%), Positives = 177/316 (56%), Gaps = 2/316 (0%) Frame = -3 Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037 M+FW EVKAGE KV + +D +LH+SQAALGE KKE+GNES+ L+ +D +K+VLGTL Sbjct: 1 MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60 Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857 Q+++DLVFDK+FELSH+WKNGSV+F+GY+ +P Sbjct: 61 PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLP---- 116 Query: 856 PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677 V A NGKPE KVE+ KA A K + V +P K AK +DD Sbjct: 117 --VNAIENGKPEPKVEQAKAVPTNANAGKAKVKVEEP-PKDAKDEEDD---------DDD 164 Query: 676 XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497 D+++ P +V+ KKRP ESATKTPVP Sbjct: 165 SDEDMVDEDSDEDSDEDIMSDAEDGSDEGSESEDEETPKKKVEPGKKRP-TESATKTPVP 223 Query: 496 EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNA--DXXXXXXXXXXXSHTCKSCTK 323 KKAKLV+P+K+ +GKK HTATPHP+K+AGK+ A D +CKSC+K Sbjct: 224 AKKAKLVSPQKT--DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSK 281 Query: 322 TFNSDGALQSHTKAKH 275 TFNS+ ALQSH+KAKH Sbjct: 282 TFNSENALQSHSKAKH 297 >ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera] Length = 307 Score = 219 bits (559), Expect = 1e-54 Identities = 131/318 (41%), Positives = 172/318 (54%), Gaps = 4/318 (1%) Frame = -3 Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037 M+FW EVKAGEPL+V +D ++HISQA+LGE+KK++GNE + LYA + G+K+VLGTLS Sbjct: 1 MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60 Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857 EK QI++DLVF+K FELSH+WKNGSVYF GY+ +P Sbjct: 61 AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDL------------ 108 Query: 856 PLVAAAANGKP-ELKVEKLK-ASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXX 683 P NGKP +LK EK + A+A + K+V+P P KD + Sbjct: 109 PHNTTVDNGKPQQLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDES 168 Query: 682 XXXXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTP 503 D + TP+ K+ ES +KTP Sbjct: 169 SEDEDMVNDRSASSEDEDD---DENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTP 225 Query: 502 VPEKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGK--SNADXXXXXXXXXXXSHTCKSC 329 VP+KKAK VTP+K+G + KK H ATP+PSKQAGK +N + S +CKSC Sbjct: 226 VPDKKAKFVTPQKTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSC 285 Query: 328 TKTFNSDGALQSHTKAKH 275 ++FNS+ ALQSHTKAKH Sbjct: 286 NRSFNSENALQSHTKAKH 303 >gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum] Length = 295 Score = 203 bits (516), Expect = 1e-49 Identities = 127/314 (40%), Positives = 169/314 (53%) Frame = -3 Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037 M+FW AEVK+GEPL V + +LH+SQA+LGE+KK++ +S+ L +DGKK+VLGTLS Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59 Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857 ++K Q +DLVFD+DFELSH+WK+GSVYF GY+ P Sbjct: 60 SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIP--- 116 Query: 856 PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677 + A NGKPE KV++ A+K+ V K S K KI +P KD K Sbjct: 117 --LTIANNGKPEAKVKE----AEKSNVAKDSAS-GKQKVKIVEPSKDAK---------AD 160 Query: 676 XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497 + E TP+ K+ +SATKTPVP Sbjct: 161 DEDESTDEDEMSEDEDSDMGEGEDESDGDDESDEGEEETPKKAEPGKKRKADSATKTPVP 220 Query: 496 EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHTCKSCTKTF 317 +KKAK VTP+K+ +GKK + H ATPHPSKQAGKS A+ +H CK+C + F Sbjct: 221 DKKAKFVTPQKT--DGKKGSGHVATPHPSKQAGKSPAN-KNQQTPKSGGAHLCKTCNRGF 277 Query: 316 NSDGALQSHTKAKH 275 S+ AL+ H+KAKH Sbjct: 278 GSENALEFHSKAKH 291 >gb|ABK93977.1| unknown [Populus trichocarpa] Length = 305 Score = 196 bits (498), Expect = 1e-47 Identities = 125/322 (38%), Positives = 162/322 (50%), Gaps = 8/322 (2%) Frame = -3 Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037 M+FW EVK GEPL+V + + +LH+SQA LGE KK++GNES+ L+ D +K+VLGTLS Sbjct: 1 MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60 Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857 EK QI +DLVF+KDFELSH+ KNGSV+F GY+V P Sbjct: 61 HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP---------ESDSDEFISDGEE 111 Query: 856 PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677 L NGK E K K + KP+ +K KI +P KD KPK Sbjct: 112 DLPVPVDNGKEEAKQPK----PENENAAKPD---SKQKVKIVEPNKDGKPKPENDDSSDE 164 Query: 676 XXXXXXXXXXXXXXXXDML--------AAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVE 521 M TP+ K+ + E Sbjct: 165 EDDSSDDGESSDDQAMMMANDEDESSEDEDDESDEDDDDSDDGDVKTPKKAEVGKKRSAE 224 Query: 520 SATKTPVPEKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHT 341 SA+K PVP+KKAK VTP+K+ + KK H ATPHPSKQA K++A+ S + Sbjct: 225 SASKNPVPDKKAKFVTPQKT--DLKKAGVHIATPHPSKQAAKTSAN--SQRKEQAQKSFS 280 Query: 340 CKSCTKTFNSDGALQSHTKAKH 275 C SC ++F S+ ALQSH+KAKH Sbjct: 281 CNSCNRSFGSENALQSHSKAKH 302 >ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi|222833604|gb|EEE72081.1| histone deacetylase [Populus trichocarpa] Length = 271 Score = 196 bits (497), Expect = 2e-47 Identities = 125/314 (39%), Positives = 161/314 (51%) Frame = -3 Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037 M+FW EVK GEPL+V + + +LH+SQA LGE KK++GNES+ L+ D +K+VLGTLS Sbjct: 1 MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60 Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857 EK QI +DLVF+KDFELSH+ KNGSV+F GY+V P Sbjct: 61 HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP-------EYPFTQINFISDGEE 113 Query: 856 PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677 L NGK E K K + KP+ +K KI +P KD KPK Sbjct: 114 DLPVPVDNGKEEAKQPK----PENENAAKPD---SKQKVKIVEPNKDGKPKPEN------ 160 Query: 676 XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497 + + KKR A ESA+K PVP Sbjct: 161 ---------------------DDSSDEEDDSSDDGESSDDQAEVGKKRSA-ESASKNPVP 198 Query: 496 EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHTCKSCTKTF 317 +KKAK VTP+K+ + KK H ATPHPSKQA K++A+ S +C SC ++F Sbjct: 199 DKKAKFVTPQKT--DLKKAGVHIATPHPSKQAAKTSAN--SQRKEQAQKSFSCNSCNRSF 254 Query: 316 NSDGALQSHTKAKH 275 S+ ALQSH+KAKH Sbjct: 255 GSENALQSHSKAKH 268