BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000937
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   223   7e-56
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   219   1e-54
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       203   1e-49
gb|ABK93977.1| unknown [Populus trichocarpa]                          196   1e-47
ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi...   196   2e-47

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  223 bits (569), Expect = 7e-56
 Identities = 137/316 (43%), Positives = 177/316 (56%), Gaps = 2/316 (0%)
 Frame = -3

Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037
            M+FW  EVKAGE  KV + +D +LH+SQAALGE KKE+GNES+ L+  +D +K+VLGTL 
Sbjct: 1    MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857
                 Q+++DLVFDK+FELSH+WKNGSV+F+GY+  +P                      
Sbjct: 61   PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLP---- 116

Query: 856  PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677
              V A  NGKPE KVE+ KA    A   K +  V +P  K AK  +DD            
Sbjct: 117  --VNAIENGKPEPKVEQAKAVPTNANAGKAKVKVEEP-PKDAKDEEDD---------DDD 164

Query: 676  XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497
                            D+++                 P  +V+  KKRP  ESATKTPVP
Sbjct: 165  SDEDMVDEDSDEDSDEDIMSDAEDGSDEGSESEDEETPKKKVEPGKKRP-TESATKTPVP 223

Query: 496  EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNA--DXXXXXXXXXXXSHTCKSCTK 323
             KKAKLV+P+K+  +GKK   HTATPHP+K+AGK+ A  D             +CKSC+K
Sbjct: 224  AKKAKLVSPQKT--DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSK 281

Query: 322  TFNSDGALQSHTKAKH 275
            TFNS+ ALQSH+KAKH
Sbjct: 282  TFNSENALQSHSKAKH 297


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  219 bits (559), Expect = 1e-54
 Identities = 131/318 (41%), Positives = 172/318 (54%), Gaps = 4/318 (1%)
 Frame = -3

Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037
            M+FW  EVKAGEPL+V   +D ++HISQA+LGE+KK++GNE + LYA + G+K+VLGTLS
Sbjct: 1    MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857
             EK  QI++DLVF+K FELSH+WKNGSVYF GY+  +P                      
Sbjct: 61   AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDL------------ 108

Query: 856  PLVAAAANGKP-ELKVEKLK-ASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXX 683
            P      NGKP +LK EK + A+A + K+V+P      P        KD    +      
Sbjct: 109  PHNTTVDNGKPQQLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDES 168

Query: 682  XXXXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTP 503
                              D                   + TP+     K+   ES +KTP
Sbjct: 169  SEDEDMVNDRSASSEDEDD---DENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTP 225

Query: 502  VPEKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGK--SNADXXXXXXXXXXXSHTCKSC 329
            VP+KKAK VTP+K+G + KK   H ATP+PSKQAGK  +N +           S +CKSC
Sbjct: 226  VPDKKAKFVTPQKTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSC 285

Query: 328  TKTFNSDGALQSHTKAKH 275
             ++FNS+ ALQSHTKAKH
Sbjct: 286  NRSFNSENALQSHTKAKH 303


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  203 bits (516), Expect = 1e-49
 Identities = 127/314 (40%), Positives = 169/314 (53%)
 Frame = -3

Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037
            M+FW AEVK+GEPL V   +  +LH+SQA+LGE+KK++  +S+ L   +DGKK+VLGTLS
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857
            ++K  Q  +DLVFD+DFELSH+WK+GSVYF GY+   P                      
Sbjct: 60   SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIP--- 116

Query: 856  PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677
              +  A NGKPE KV++    A+K+ V K   S  K   KI +P KD K           
Sbjct: 117  --LTIANNGKPEAKVKE----AEKSNVAKDSAS-GKQKVKIVEPSKDAK---------AD 160

Query: 676  XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497
                              +                 E TP+     K+   +SATKTPVP
Sbjct: 161  DEDESTDEDEMSEDEDSDMGEGEDESDGDDESDEGEEETPKKAEPGKKRKADSATKTPVP 220

Query: 496  EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHTCKSCTKTF 317
            +KKAK VTP+K+  +GKK + H ATPHPSKQAGKS A+           +H CK+C + F
Sbjct: 221  DKKAKFVTPQKT--DGKKGSGHVATPHPSKQAGKSPAN-KNQQTPKSGGAHLCKTCNRGF 277

Query: 316  NSDGALQSHTKAKH 275
             S+ AL+ H+KAKH
Sbjct: 278  GSENALEFHSKAKH 291


>gb|ABK93977.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  196 bits (498), Expect = 1e-47
 Identities = 125/322 (38%), Positives = 162/322 (50%), Gaps = 8/322 (2%)
 Frame = -3

Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037
            M+FW  EVK GEPL+V + +  +LH+SQA LGE KK++GNES+ L+   D +K+VLGTLS
Sbjct: 1    MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857
             EK  QI +DLVF+KDFELSH+ KNGSV+F GY+V  P                      
Sbjct: 61   HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP---------ESDSDEFISDGEE 111

Query: 856  PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677
             L     NGK E K  K     +     KP+   +K   KI +P KD KPK         
Sbjct: 112  DLPVPVDNGKEEAKQPK----PENENAAKPD---SKQKVKIVEPNKDGKPKPENDDSSDE 164

Query: 676  XXXXXXXXXXXXXXXXDML--------AAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVE 521
                             M                            TP+     K+ + E
Sbjct: 165  EDDSSDDGESSDDQAMMMANDEDESSEDEDDESDEDDDDSDDGDVKTPKKAEVGKKRSAE 224

Query: 520  SATKTPVPEKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHT 341
            SA+K PVP+KKAK VTP+K+  + KK   H ATPHPSKQA K++A+           S +
Sbjct: 225  SASKNPVPDKKAKFVTPQKT--DLKKAGVHIATPHPSKQAAKTSAN--SQRKEQAQKSFS 280

Query: 340  CKSCTKTFNSDGALQSHTKAKH 275
            C SC ++F S+ ALQSH+KAKH
Sbjct: 281  CNSCNRSFGSENALQSHSKAKH 302


>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi|222833604|gb|EEE72081.1|
            histone deacetylase [Populus trichocarpa]
          Length = 271

 Score =  196 bits (497), Expect = 2e-47
 Identities = 125/314 (39%), Positives = 161/314 (51%)
 Frame = -3

Query: 1216 MQFWAAEVKAGEPLKVPAVEDSMLHISQAALGEVKKERGNESILLYATVDGKKIVLGTLS 1037
            M+FW  EVK GEPL+V + +  +LH+SQA LGE KK++GNES+ L+   D +K+VLGTLS
Sbjct: 1    MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 1036 TEKCTQITYDLVFDKDFELSHSWKNGSVYFVGYQVEMPAXXXXXXXXXXXXXXXXXXEAP 857
             EK  QI +DLVF+KDFELSH+ KNGSV+F GY+V  P                      
Sbjct: 61   HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP-------EYPFTQINFISDGEE 113

Query: 856  PLVAAAANGKPELKVEKLKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXX 677
             L     NGK E K  K     +     KP+   +K   KI +P KD KPK         
Sbjct: 114  DLPVPVDNGKEEAKQPK----PENENAAKPD---SKQKVKIVEPNKDGKPKPEN------ 160

Query: 676  XXXXXXXXXXXXXXXXDMLAAXXXXXXXXXXXXXXXEPTPEVKASKKRPAVESATKTPVP 497
                                                    + +  KKR A ESA+K PVP
Sbjct: 161  ---------------------DDSSDEEDDSSDDGESSDDQAEVGKKRSA-ESASKNPVP 198

Query: 496  EKKAKLVTPKKSGGEGKKVNTHTATPHPSKQAGKSNADXXXXXXXXXXXSHTCKSCTKTF 317
            +KKAK VTP+K+  + KK   H ATPHPSKQA K++A+           S +C SC ++F
Sbjct: 199  DKKAKFVTPQKT--DLKKAGVHIATPHPSKQAAKTSAN--SQRKEQAQKSFSCNSCNRSF 254

Query: 316  NSDGALQSHTKAKH 275
             S+ ALQSH+KAKH
Sbjct: 255  GSENALQSHSKAKH 268