BLASTX nr result
ID: Coptis25_contig00000920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000920 (1057 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera] 343 5e-92 emb|CBI19029.3| unnamed protein product [Vitis vinifera] 327 4e-87 ref|XP_003589591.1| Replication factor C large subunit [Medicago... 261 2e-67 ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|2... 246 5e-63 ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837... 237 4e-60 >emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera] Length = 1170 Score = 343 bits (879), Expect = 5e-92 Identities = 180/340 (52%), Positives = 239/340 (70%), Gaps = 6/340 (1%) Frame = +2 Query: 56 MGERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQMKLKFGAAMES 235 + E LKNVLLV+GPVGSGKSAAIYACA+EQGF +IE++ S R+G +K + G A+ES Sbjct: 326 LDEGTGLKNVLLVTGPVGSGKSAAIYACAKEQGFRIIEINTSGLRSGTVVKQRIGEALES 385 Query: 236 LGLNKWSLEVPLGLNVKHIPEFPSTQPCKSSIRESDDDVIEVLPETCKDKSDGLKSEPCN 415 GL + SLE P+G KHI + P ++ +E + VIE++P + ++ S P Sbjct: 386 HGLKR-SLENPIGSQSKHIMKSFPALPNGTATQEFESKVIELIPSSDEEDSHDAIGTPEK 444 Query: 416 VGVKDNSTASHRGADKTLILFEDVDAVFDEDRGLIASIQQIAETAKRPIILTSSSKDPLL 595 K N TA RG TLILFEDVD F EDRGLIA+IQQ+AETAKRPIILTS+S +P+L Sbjct: 445 HIHKKNRTACDRGETITLILFEDVDITFPEDRGLIAAIQQLAETAKRPIILTSNSNNPVL 504 Query: 596 PDQLDRVEVRFAVPLPEELSSLVYMVCGAEQADINPELLDQFIRCCQGDIRKIIMLLQFW 775 PD LDR+EV F +P P+EL YMVC AE+ +I P L+++FI CQGDIRK +M LQFW Sbjct: 505 PDNLDRLEVCFTLPSPKELLCHAYMVCAAEKTNIQPWLIERFIEYCQGDIRKTLMHLQFW 564 Query: 776 CQGKTNKIDRRIQSTYGPPHFDVDAGHHILPKVIPWEFPCQLAELVEREITKSLPMVKGN 955 CQGK + DR+ YGP FD++AGH ILPK+IPW+FP QL+ELVE+EI KSL ++G+ Sbjct: 565 CQGKRYRQDRKAHKIYGPLSFDLEAGHQILPKIIPWDFPSQLSELVEKEIAKSLSKMEGD 624 Query: 956 ASLLDIVEEEEFSSQDMQEALGM------NMEAKKEAMLN 1057 +S +++++EE +++MQ L M ++EAKKEAM + Sbjct: 625 SSSMEVIKEEGLHNKEMQNGLEMHDYEKDSIEAKKEAMFS 664 >emb|CBI19029.3| unnamed protein product [Vitis vinifera] Length = 919 Score = 327 bits (837), Expect = 4e-87 Identities = 178/351 (50%), Positives = 237/351 (67%), Gaps = 17/351 (4%) Frame = +2 Query: 56 MGERADLKNVLLVSGPVG-----------SGKSAAIYACAREQGFEVIEVSASDWRNGAQ 202 + E LKNVLLV+GPVG SGKSAAIYACA+EQGF +IE++ S R+G Sbjct: 100 LDEGTGLKNVLLVTGPVGVYTHSISTAIFSGKSAAIYACAKEQGFRIIEINTSGLRSGTV 159 Query: 203 MKLKFGAAMESLGLNKWSLEVPLGLNVKHIPEFPSTQPCKSSIRESDDDVIEVLPETCKD 382 +K + G A+ES GL + SLE P+G KHI + P ++ +E + VIE++P + ++ Sbjct: 160 VKQRIGEALESHGLKR-SLENPIGSQSKHIMKSFPALPNGTATQEFESKVIELIPSSDEE 218 Query: 383 KSDGLKSEPCNVGVKDNSTASHRGADKTLILFEDVDAVFDEDRGLIASIQQIAETAKRPI 562 S P K N TA RG TLILFEDVD F EDRGLIA+IQQ+AETAKRPI Sbjct: 219 DSHDDIGTPEKHIHKKNRTACDRGETITLILFEDVDITFPEDRGLIAAIQQLAETAKRPI 278 Query: 563 ILTSSSKDPLLPDQLDRVEVRFAVPLPEELSSLVYMVCGAEQADINPELLDQFIRCCQGD 742 ILTS+S +P+LPD LDR+EV F +P +EL YMVC AE+ +I P L+++FI CQGD Sbjct: 279 ILTSNSNNPVLPDNLDRLEVCFTLPSLKELLCHAYMVCAAEKTNIQPWLIERFIEYCQGD 338 Query: 743 IRKIIMLLQFWCQGKTNKIDRRIQSTYGPPHFDVDAGHHILPKVIPWEFPCQLAELVERE 922 IRK +M LQFWCQGK + ++ YGP FD+DAGH ILPK+IPW+FP QL+ELVE+E Sbjct: 339 IRKTLMHLQFWCQGKRYRQGQKAHKIYGPLSFDLDAGHQILPKIIPWDFPSQLSELVEKE 398 Query: 923 ITKSLPMVKGNASLLDIVEEEEFSSQDMQEALGM------NMEAKKEAMLN 1057 I KSL ++G++S +++++EE +++MQ L M ++EAKKEAM + Sbjct: 399 IAKSLSKMEGDSSSMEVIKEEGLHNKEMQNGLEMHDYEKDSIEAKKEAMFS 449 >ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula] gi|355478639|gb|AES59842.1| Replication factor C large subunit [Medicago truncatula] Length = 1178 Score = 261 bits (668), Expect = 2e-67 Identities = 146/311 (46%), Positives = 203/311 (65%), Gaps = 1/311 (0%) Frame = +2 Query: 56 MGERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQMKLKFGAAMES 235 + E LKNVLL++GPVGSGKSAA+YACA+EQGFEV+E++ SD RN +K FG A+ S Sbjct: 346 VSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTSDCRNATAVKQYFGDALGS 405 Query: 236 LGLNKWSLEVPLGLNVKHIPEFPS-TQPCKSSIRESDDDVIEVLPETCKDKSDGLKSEPC 412 + K +E +G K + + P +E D DVIE++ + D + G Sbjct: 406 QCV-KSLVEHTVGSQKKTLKLLQAPASPNVKEAKEMDHDVIEMITLS-DDGAHGPGGTSQ 463 Query: 413 NVGVKDNSTASHRGADKTLILFEDVDAVFDEDRGLIASIQQIAETAKRPIILTSSSKDPL 592 + DN+ S A +TLIL EDVD +F EDRG IA+IQ IAETAK PIILTS+SK Sbjct: 464 KLHAIDNTLTSD--AVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKKAG 521 Query: 593 LPDQLDRVEVRFAVPLPEELSSLVYMVCGAEQADINPELLDQFIRCCQGDIRKIIMLLQF 772 LP+ R+ V F++PLP+EL ++ VC E+ D NP L+++FI+ C DIRK I+ LQF Sbjct: 522 LPNNFCRLHVSFSLPLPDELLRHLFTVCATEEVDANPLLMEKFIQSCDRDIRKTILHLQF 581 Query: 773 WCQGKTNKIDRRIQSTYGPPHFDVDAGHHILPKVIPWEFPCQLAELVEREITKSLPMVKG 952 W Q K D+++Q+ YG FD++AGH ILPK+IPW FP +L++L+E E+TKS+ ++ Sbjct: 582 WFQNKKYSKDKKVQTLYGSLPFDLEAGHKILPKMIPWSFPSELSKLIENEVTKSIATMEN 641 Query: 953 NASLLDIVEEE 985 N+S +V+EE Sbjct: 642 NSSWEGLVKEE 652 >ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|222843966|gb|EEE81513.1| predicted protein [Populus trichocarpa] Length = 1068 Score = 246 bits (629), Expect = 5e-63 Identities = 144/342 (42%), Positives = 202/342 (59%), Gaps = 10/342 (2%) Frame = +2 Query: 62 ERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQMKLKFGAAMESLG 241 E A LKNVLL++GP GSGKSAAIYACA+E+GF+V+E + + ++ Sbjct: 455 EGASLKNVLLITGPTGSGKSAAIYACAKEEGFKVLEKTHVEPQSN--------------- 499 Query: 242 LNKWSLEVPLGLNVKHIPEFPSTQPCKSSIRESDDDVIEVLPETCKDKSDGLKSEPCNVG 421 +I +F S P ++ ++EV+P + +D S G Sbjct: 500 ---------------NITKFSSALPDSKLTQDFYRKMVEVVPISDEDNSLGATEATVKFD 544 Query: 422 VKDNSTASHRGADKTLILFEDVDAVFDEDRGLIASIQQIAETAKRPIILTSSSKDPLLPD 601 D++ A +G K LILFEDVD F EDRG +A+IQQIAE AK P+ILTS+ + P LP Sbjct: 545 SNDSTIACGQGKLKHLILFEDVDLAFTEDRGFVAAIQQIAEKAKGPVILTSNCEKPDLPA 604 Query: 602 QLDRVEVRFAVPLPEELSSLVYMVCGAEQADINPELLDQFIRCCQGDIRKIIMLLQFWCQ 781 LDR+EV F +P +EL L MVC AE+ +I LL Q + CQGDIRK IM LQFW Q Sbjct: 605 NLDRLEVCFVLPSEKELLRLADMVCSAEKVNIQAHLLKQVVEYCQGDIRKTIMHLQFWFQ 664 Query: 782 GKTNK---IDRRIQSTYGPPHFDVDAGHHILPKVIPWEFPCQLAELVEREITKSLPMVKG 952 G+ + R Q +GP FD +AGH +LPK++PW+FPCQL+ELVE+EI SL M+ Sbjct: 665 GRQIRKLSPSREAQRLFGPLMFDPEAGHQVLPKMMPWDFPCQLSELVEKEIATSLSMMVE 724 Query: 953 NASLLDIVEEEEFSSQDMQEALGMN-------MEAKKEAMLN 1057 N+ L+++ +E+F +++Q + ++ + KKEAML+ Sbjct: 725 NSVSLEVI-KEDFEDKELQNNIKIHNYGKDSGTKTKKEAMLS 765 >ref|XP_003561795.1| PREDICTED: uncharacterized protein LOC100837229 [Brachypodium distachyon] Length = 1272 Score = 237 bits (604), Expect = 4e-60 Identities = 138/316 (43%), Positives = 184/316 (58%) Frame = +2 Query: 62 ERADLKNVLLVSGPVGSGKSAAIYACAREQGFEVIEVSASDWRNGAQMKLKFGAAMESLG 241 E +D +NVLL++GPVG GKSAA++ACAREQGF VIEV+ SD RNGA +K KF A +S G Sbjct: 458 EASDFENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDTRNGAYVKQKFEEATKSHG 517 Query: 242 LNKWSLEVPLGLNVKHIPEFPSTQPCKSSIRESDDDVIEVLPETCKDKSDGLKSEPCNVG 421 L KWS E +T P S+ D +P+ + S C Sbjct: 518 LEKWSQEEV------------TTPPRNDSL-----DPTSGIPDRTEYNQSISCSVKCYSS 560 Query: 422 VKDNSTASHRGADKTLILFEDVDAVFDEDRGLIASIQQIAETAKRPIILTSSSKDPLLPD 601 K + A + +KTLILFEDVD VFDEDRG I++I +IAET K PIILTS+ KDP LP Sbjct: 561 SKSSDEAPKQVMNKTLILFEDVDTVFDEDRGFISTILKIAETTKWPIILTSNKKDPSLPH 620 Query: 602 QLDRVEVRFAVPLPEELSSLVYMVCGAEQADINPELLDQFIRCCQGDIRKIIMLLQFWCQ 781 LD++ + F P EL S V M+C +E ++ L I C GDIR+ +LLQFW Q Sbjct: 621 LLDQLVLDFKYPSSGELLSHVGMICKSEGVNVTASQLKYIINACLGDIRRTTLLLQFWYQ 680 Query: 782 GKTNKIDRRIQSTYGPPHFDVDAGHHILPKVIPWEFPCQLAELVEREITKSLPMVKGNAS 961 GK +R + GP D+DA H +P+++PW+FPC+L+E V EI K++ + Sbjct: 681 GKHQYTERSNKCLSGPFSLDLDAIHSTVPRMLPWDFPCKLSETVCMEIEKNILLADEKKR 740 Query: 962 LLDIVEEEEFSSQDMQ 1009 L E EF + ++Q Sbjct: 741 QL---EASEFEALELQ 753