BLASTX nr result
ID: Coptis25_contig00000918
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000918 (2264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 555 e-155 ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 530 e-148 ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2... 517 e-144 emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 511 e-142 ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|2... 503 e-140 >ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis vinifera] gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera] Length = 450 Score = 555 bits (1431), Expect = e-155 Identities = 265/430 (61%), Positives = 312/430 (72%), Gaps = 5/430 (1%) Frame = -3 Query: 1881 MPENRQVQSNGISVSSNASADNLEDAMWRLKIQTQDVQNGVAGHSSPYPDRPGEPDCIYY 1702 M +NRQVQSNG+S N S++N+E+A+ RLKI + G GHSSPYPDRPGEPDCIYY Sbjct: 1 MLDNRQVQSNGVS---NPSSENVEEAILRLKIHDNQ-EEGSVGHSSPYPDRPGEPDCIYY 56 Query: 1701 LRTGLCGYGSNCRFNHPPYSGQAVQYRGELPERVGQPDCQYFLKTGTCRFGSTCKYNHPR 1522 LRTGLCGYGSNCRFNHP YS Q QYRGELPERVGQPDC YFLKTGTC++GSTCKY+HPR Sbjct: 57 LRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPR 116 Query: 1521 DKHIAGQVPLNVLGLPMRQEEKPCPYYMRNWSCKFGIACKFHHPQP--LGAVVPVXXXXX 1348 D+H AG V LN++GLPMRQEEKPC YYMR CKFG ACKFHHPQP G V+P Sbjct: 117 DRHGAGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAA 176 Query: 1347 XXXXXXSVAPQSGLAYAGGLPAWSLPRAPYASGSRLQGPQAYMPVVISPSQGILHGQQGW 1168 S+ P SGL Y GGLPAWSLPRAPY G R+QGPQ YMP+V+SPSQGI+ QGW Sbjct: 177 FGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPA-QGW 235 Query: 1167 NTYTGTMTQVSSNNALGSNLVYNSKNQGDLGASGQMPFLSTSVVHFPERPDQPECQYYMK 988 NTY G M+ +SS LGSNLVYNS+NQ + G+SGQ+ LS+ + H PERPDQPEC+Y+M Sbjct: 236 NTYMGNMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMS 295 Query: 987 TGSCKYGPTCKYHHPKERLTSLATGSLGPYGLPLRPGQAICTFYSMYGICKFGSTCKFDH 808 TGSCKYG CKYHHPKER+ LAT +LGP GLPLRPGQA+C+ Y++YG+CK+G TCKFDH Sbjct: 296 TGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDH 355 Query: 807 PMAGF--YNYGVNVPALT-MPEXXXXXXXXXXXXXXXXXXXXXXXRLPDRSFKPETASPK 637 P+ G+ YNY +++P L+ + + PD K E+ S K Sbjct: 356 PLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTK 415 Query: 636 HQNLDTKESE 607 QN DTK E Sbjct: 416 SQNPDTKAPE 425 >ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis] gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis] Length = 456 Score = 530 bits (1365), Expect = e-148 Identities = 253/429 (58%), Positives = 306/429 (71%), Gaps = 6/429 (1%) Frame = -3 Query: 1872 NRQVQSNGISVSSNASADNLEDAMWRLKIQTQDVQNGVAGHSSPYPDRPGEPDCIYYLRT 1693 NRQV+SN +S N S DN+E+A+WRLKI Q G+A SSPYPDRPGEPDC+YYLRT Sbjct: 11 NRQVKSNAVS---NQSPDNIEEAIWRLKIHDNQEQGGMAP-SSPYPDRPGEPDCVYYLRT 66 Query: 1692 GLCGYGSNCRFNHPPYSGQAVQYRGELPERVGQPDCQYFLKTGTCRFGSTCKYNHPRDKH 1513 GLCGYG+NCRFNHPPY+ Q Q++ ELPERVGQPDC Y+LKTGTC++GSTCKY+HPRD++ Sbjct: 67 GLCGYGNNCRFNHPPYAAQGNQFKEELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRN 126 Query: 1512 IAGQVPLNVLGLPMRQEEKPCPYYMRNWSCKFGIACKFHHPQ--PLGAVVPVXXXXXXXX 1339 AG V N++GLPMRQ+EK CPYYMR SCKFG+ACKFHHPQ PLG +P Sbjct: 127 GAGPVSFNIVGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGP 186 Query: 1338 XXXSVAPQSGLAYAGGLPAWSLPRAPYASGSRLQGPQAYMPVVISPSQGILHGQQGWNTY 1159 S P SGL Y GGLP WSLPRAPY SG RLQGPQ YMP V+SPSQG++ QGWNTY Sbjct: 187 MASSNLPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMPAVLSPSQGVV-AAQGWNTY 245 Query: 1158 TGTMTQVSSNNALGSNLVYNSKNQGDLGASGQMPFLSTSVVHFPERPDQPECQYYMKTGS 979 G ++ +SS + LGS++VYNS+NQ + G+SGQ+ LST+ + PERPDQPEC+Y+M TG+ Sbjct: 246 VGNLSPMSSGSVLGSSIVYNSRNQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGT 305 Query: 978 CKYGPTCKYHHPKERLTSLATGSLGPYGLPLRPGQAICTFYSMYGICKFGSTCKFDHPMA 799 CKYG CKYHHPKER+ LAT S+GP GLP RPGQ IC+ YSMYG+CKFG TC+FDHP Sbjct: 306 CKYGSDCKYHHPKERIAQLATNSIGPVGLPSRPGQPICSNYSMYGLCKFGPTCRFDHPFT 365 Query: 798 GF-YNYGVNV-PALTMPEXXXXXXXXXXXXXXXXXXXXXXXRLPDRSFKPETASPKHQNL 625 G+ Y Y +++ P + + PD P+ AS KHQN Sbjct: 366 GYPYGYSLSLQPLSIIDSSLLSYPRMSPPALSSESPISLSSKFPDWVQNPDGASSKHQNS 425 Query: 624 D--TKESED 604 D TK S+D Sbjct: 426 DRNTKISDD 434 >ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa] Length = 450 Score = 517 bits (1332), Expect = e-144 Identities = 253/435 (58%), Positives = 309/435 (71%), Gaps = 9/435 (2%) Frame = -3 Query: 1881 MPE--NRQVQSNGISVSSNASADNLEDAMWRLKIQTQDVQNGVAGHSSPYPDRPGEPDCI 1708 MP+ NRQV+SN +S N SADN+E+A WRLKI Q G+A SSPYPDRPG PDC Sbjct: 1 MPDQNNRQVKSNAVS---NHSADNIEEAFWRLKIHDPQEQGGMA-QSSPYPDRPGVPDCG 56 Query: 1707 YYLRTGLCGYGSNCRFNHPPYSGQAVQYRGELPERVGQPDCQYFLKTGTCRFGSTCKYNH 1528 YYLRTGLCGYGSNCR+NHP Y+ Q Q R ELPER+GQPDC Y++KTGTC++GSTCKY+H Sbjct: 57 YYLRTGLCGYGSNCRYNHPIYAAQGTQLREELPERIGQPDCGYYIKTGTCKYGSTCKYHH 116 Query: 1527 PRDKHIAGQVPLNVLGLPMRQEEKPCPYYMRNWSCKFGIACKFHHPQP--LGAVVPVXXX 1354 PRD++ AG V N LGLPMRQ+EK CPYYMR SCKFG+ACKFHHPQP LG +P+ Sbjct: 117 PRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGA 176 Query: 1353 XXXXXXXXSVAPQSGLAYAGGLPAWSLPRA-PYASGSRLQGPQAYMPVVISPSQGILHGQ 1177 + P SGL Y GGLP WSLPRA PY SG+ LQGPQAYMPVV+SPSQGI+ Sbjct: 177 AAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQGIV-PV 235 Query: 1176 QGWNTYTGTMTQVSSNNALGSNLVYNSKNQGDLGASGQMPFLSTSVVHFPERPDQPECQY 997 GWNTY G +SS++ LGSN Y+S+N GD G+SG + LST++ PERPDQPEC++ Sbjct: 236 PGWNTYVGNSNPMSSSSILGSNRAYDSRNHGDSGSSGHL--LSTAIPALPERPDQPECRH 293 Query: 996 YMKTGSCKYGPTCKYHHPKERLTSLATGSLGPYGLPLRPGQAICTFYSMYGICKFGSTCK 817 +M +G+CKYG CKYHHPKER+ LAT ++GP+GLPLRPGQA+C YSMYGICKFG TC+ Sbjct: 294 FMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGPTCR 353 Query: 816 FDHPMAGF-YNYGVNVPALTMPEXXXXXXXXXXXXXXXXXXXXXXXRLPDRSFKPETAS- 643 +DHP+ + YNY +++P+L+M + +LPD P+ AS Sbjct: 354 YDHPLPTYPYNYSLSLPSLSMMDSSLVTYPRMAQAALSSATPVSLSKLPDLIRNPDGASY 413 Query: 642 PKHQNLD--TKESED 604 KHQN D TK +D Sbjct: 414 NKHQNSDSNTKTLDD 428 >emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] Length = 460 Score = 511 bits (1317), Expect = e-142 Identities = 246/424 (58%), Positives = 286/424 (67%), Gaps = 36/424 (8%) Frame = -3 Query: 1770 QNGVAGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPPYSGQAVQYRGELPERVGQP 1591 + G GHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHP YS Q QYRGELPERVGQP Sbjct: 13 EEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQP 72 Query: 1590 DCQYFLKTGTCRFGSTCKYNHPRDKHIAGQVPLNVLGLPMRQEEKPCPYYMRNWSCKFGI 1411 DC YFLKTGTC++GSTCKY+HPRD+H AG V LN++GLPMRQEEKPC YYMR CKFG Sbjct: 73 DCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPCSYYMRTGLCKFGA 132 Query: 1410 ACKFHHPQP--LGAVVPVXXXXXXXXXXXSVAPQSGLAYAGGLPAWSLPRAPYASGSRLQ 1237 ACKFHHPQP G V+P S+ P SGL Y GGLPAWSLPRAPY G R+Q Sbjct: 133 ACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQ 192 Query: 1236 GPQAYMPVVISPSQGILHGQQGWNTY-------------------------------TGT 1150 GPQ YMP+V+SPSQGI+ QGWNTY G Sbjct: 193 GPQTYMPIVLSPSQGIVPA-QGWNTYMPHFLVLMKSFHVVNLVYSIDPNEFVICEIPRGN 251 Query: 1149 MTQVSSNNALGSNLVYNSKNQGDLGASGQMPFLSTSVVHFPERPDQPECQYYMKTGSCKY 970 M+ +SS LGSNLVYNS+NQ + G+SGQ+ LS+ + H PERPDQPEC+Y+M TGSCKY Sbjct: 252 MSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKY 311 Query: 969 GPTCKYHHPKERLTSLATGSLGPYGLPLRPGQAICTFYSMYGICKFGSTCKFDHPMAGF- 793 G CKYHHPKER+ LAT +LGP GLPLRPGQA+C+ Y++YG+CK+G TCKFDHP+ G+ Sbjct: 312 GSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYS 371 Query: 792 -YNYGVNVPALT-MPEXXXXXXXXXXXXXXXXXXXXXXXRLPDRSFKPETASPKHQNLDT 619 YNY +++P L+ + + PD K E+ S K QN DT Sbjct: 372 SYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPDT 431 Query: 618 KESE 607 K E Sbjct: 432 KAPE 435 >ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|222861263|gb|EEE98805.1| predicted protein [Populus trichocarpa] Length = 446 Score = 503 bits (1296), Expect = e-140 Identities = 250/434 (57%), Positives = 302/434 (69%), Gaps = 8/434 (1%) Frame = -3 Query: 1881 MPE--NRQVQSNGISVSSNASADNLEDAMWRLKIQTQDVQNGVAGHSSPYPDRPGEPDCI 1708 MP+ NRQV+SN +S N SA+N+E+A+WRLKI Q G+A SSPYPDRPG PDC Sbjct: 1 MPDHNNRQVKSNAVS---NQSAENIEEAIWRLKIHDHQEQGGMA-QSSPYPDRPGAPDCG 56 Query: 1707 YYLRTGLCGYGSNCRFNHPPYSGQAVQYRGELPERVGQPDCQYFLKTGTCRFGSTCKYNH 1528 YYLRTGLCGYGSNCRFNHP Y+ Q R ELPERVGQPDC Y+LKTGTC++GSTCKY+H Sbjct: 57 YYLRTGLCGYGSNCRFNHPVYAALGAQLREELPERVGQPDCGYYLKTGTCKYGSTCKYHH 116 Query: 1527 PRDKHIAGQVPLNVLGLPMRQEEKPCPYYMRNWSCKFGIACKFHHPQP--LGAVVPVXXX 1354 PRD++ AG V N LGLPMRQ+EK CPYYMR SCKFG+ACKFHHPQP LG + Sbjct: 117 PRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSFSLTGA 176 Query: 1353 XXXXXXXXSVAPQSGLAYAGGLPAWSLPRAPYASGSRLQGPQAYMPVVISPSQGILHGQQ 1174 + P SGL Y GGLP WSLPRAP SG+ LQGPQAYMPVV+SPS GI+ Sbjct: 177 AAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMPVVVSPSPGII-PVP 235 Query: 1173 GWNTYTGTMTQVSSNNALGSNLVYNSKNQGDLGASGQMPFLSTSVVHFPERPDQPECQYY 994 GWNTY G + +SS++ LGSN Y+S+NQGD G+ GQ+ LST PERP QPEC+++ Sbjct: 236 GWNTYVGNLNPMSSSSILGSNRAYDSRNQGDSGSGGQVHLLSTVSPILPERPGQPECRHF 295 Query: 993 MKTGSCKYGPTCKYHHPKERLTSLATGSLGPYGLPLRPGQAICTFYSMYGICKFGSTCKF 814 M TG+CKYG CKYHHPKER+ LAT ++G GLP RPGQA+C YSMYGICKFG TC++ Sbjct: 296 MSTGTCKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGPTCRY 355 Query: 813 DHPMAGF-YNYGVNVPALTMPEXXXXXXXXXXXXXXXXXXXXXXXRLPDRSFKPETAS-P 640 DHP+ + YNY +++P+L++ + +LPD P+ AS Sbjct: 356 DHPIHTYPYNYSLSLPSLSIMD-----SSLITYPRMAQAAPVTLSKLPDLIHNPDGASYN 410 Query: 639 KHQNLD--TKESED 604 KHQN D TK S+D Sbjct: 411 KHQNPDTSTKISDD 424