BLASTX nr result

ID: Coptis25_contig00000916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000916
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]             256   4e-66
dbj|BAF75825.1| hypothetical protein [Malus x domestica]              256   5e-66
gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]            255   1e-65
gb|AFJ04514.1| elongation factor 1-alpha, partial [Vernicia fordii]   253   3e-65
ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus...   253   3e-65

>gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]
          Length = 447

 Score =  256 bits (655), Expect = 4e-66
 Identities = 124/129 (96%), Positives = 129/129 (100%)
 Frame = +3

Query: 3   KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNH 182
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPA+EAANFT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNH 337

Query: 183 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKP 362
           PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKE+EKEPKFLKNGDAG+VKMLPTKP
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKP 397

Query: 363 MVVETFSEY 389
           MVVETFSEY
Sbjct: 398 MVVETFSEY 406


>dbj|BAF75825.1| hypothetical protein [Malus x domestica]
          Length = 184

 Score =  256 bits (654), Expect = 5e-66
 Identities = 124/129 (96%), Positives = 128/129 (99%)
 Frame = +3

Query: 3   KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNH 182
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKE ANFT+QVIIMNH
Sbjct: 15  KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKETANFTSQVIIMNH 74

Query: 183 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKP 362
           PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKE+EKEPKFLKNGDAG+VKMLPTKP
Sbjct: 75  PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKP 134

Query: 363 MVVETFSEY 389
           MVVETFSEY
Sbjct: 135 MVVETFSEY 143


>gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]
          Length = 447

 Score =  255 bits (651), Expect = 1e-65
 Identities = 124/129 (96%), Positives = 128/129 (99%)
 Frame = +3

Query: 3   KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNH 182
           KSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNH
Sbjct: 278 KSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNH 337

Query: 183 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKP 362
           PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKE+EKEPKFLKNGDAG+VKMLPTKP
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMLPTKP 397

Query: 363 MVVETFSEY 389
           MVVETFSEY
Sbjct: 398 MVVETFSEY 406


>gb|AFJ04514.1| elongation factor 1-alpha, partial [Vernicia fordii]
          Length = 438

 Score =  253 bits (647), Expect = 3e-65
 Identities = 123/129 (95%), Positives = 127/129 (98%)
 Frame = +3

Query: 3   KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNH 182
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNH
Sbjct: 277 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNH 336

Query: 183 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKP 362
           PGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKE+EKEPKFLKNGDAG VKM+PTKP
Sbjct: 337 PGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKP 396

Query: 363 MVVETFSEY 389
           MVVETFSEY
Sbjct: 397 MVVETFSEY 405


>ref|XP_002528028.1| elongation factor 1-alpha, putative [Ricinus communis]
           gi|223532558|gb|EEF34346.1| elongation factor 1-alpha,
           putative [Ricinus communis]
          Length = 449

 Score =  253 bits (647), Expect = 3e-65
 Identities = 123/129 (95%), Positives = 127/129 (98%)
 Frame = +3

Query: 3   KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAANFTAQVIIMNH 182
           KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAANFT+QVIIMNH
Sbjct: 278 KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNH 337

Query: 183 PGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEVEKEPKFLKNGDAGIVKMLPTKP 362
           PGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKE+EKEPKFLKNGDAG VKM+PTKP
Sbjct: 338 PGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKP 397

Query: 363 MVVETFSEY 389
           MVVETFSEY
Sbjct: 398 MVVETFSEY 406


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