BLASTX nr result

ID: Coptis25_contig00000910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000910
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [C...   149   3e-34
gb|ACT83792.1| putative elongation factor 1 alpha [Lemna minor]       149   3e-34
ref|XP_002284964.1| PREDICTED: elongation factor 1-alpha-like [V...   148   4e-34
gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]        147   7e-34
gb|AAM94339.1| elongation factor 1-alpha [Striga hermonthica]         147   7e-34

>ref|XP_004138964.1| PREDICTED: elongation factor 1-alpha-like [Cucumis sativus]
           gi|449505290|ref|XP_004162426.1| PREDICTED: elongation
           factor 1-alpha-like [Cucumis sativus]
          Length = 447

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = -3

Query: 214 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLP 35
           LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRP+DKPLRLP
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPSDKPLRLP 237

Query: 34  LQDVYKIGGIG 2
           LQDVYKIGGIG
Sbjct: 238 LQDVYKIGGIG 248


>gb|ACT83792.1| putative elongation factor 1 alpha [Lemna minor]
          Length = 155

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/71 (98%), Positives = 71/71 (100%)
 Frame = -3

Query: 214 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLP 35
           LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRP+DKPLRLP
Sbjct: 50  LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPSDKPLRLP 109

Query: 34  LQDVYKIGGIG 2
           LQDVYKIGGIG
Sbjct: 110 LQDVYKIGGIG 120


>ref|XP_002284964.1| PREDICTED: elongation factor 1-alpha-like [Vitis vinifera]
           gi|225435241|ref|XP_002284924.1| PREDICTED: elongation
           factor 1-alpha-like [Vitis vinifera]
           gi|147841303|emb|CAN64511.1| hypothetical protein
           VITISV_035691 [Vitis vinifera]
          Length = 447

 Score =  148 bits (374), Expect = 4e-34
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = -3

Query: 214 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLP 35
           LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALD+I+EPKRPTDKPLRLP
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMINEPKRPTDKPLRLP 237

Query: 34  LQDVYKIGGIG 2
           LQDVYKIGGIG
Sbjct: 238 LQDVYKIGGIG 248


>gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]
          Length = 447

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = -3

Query: 214 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLP 35
           LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALDLISEPKRP+DKPLRLP
Sbjct: 178 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDLISEPKRPSDKPLRLP 237

Query: 34  LQDVYKIGGIG 2
           LQDVYKIGGIG
Sbjct: 238 LQDVYKIGGIG 248


>gb|AAM94339.1| elongation factor 1-alpha [Striga hermonthica]
          Length = 150

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/71 (97%), Positives = 71/71 (100%)
 Frame = -3

Query: 214 LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLISEPKRPTDKPLRLP 35
           LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLI+EPKRP+DKPLRLP
Sbjct: 44  LKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLP 103

Query: 34  LQDVYKIGGIG 2
           LQDVYKIGGIG
Sbjct: 104 LQDVYKIGGIG 114


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