BLASTX nr result

ID: Coptis25_contig00000908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000908
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....    91   2e-36
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...    90   3e-36
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...    90   3e-36
emb|CBI36765.3| unnamed protein product [Vitis vinifera]               90   5e-36
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...    90   5e-36

>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score = 90.5 bits (223), Expect(2) = 2e-36
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40
           +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD  ++      ++ +  +MQ
Sbjct: 90  VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDENQQVSLEQVMSPIMQ 149

Query: 39  EYPEIETCTECSA 1
           ++ EIETC ECSA
Sbjct: 150 QFREIETCIECSA 162



 Score = 87.0 bits (214), Expect(2) = 2e-36
 Identities = 48/78 (61%), Positives = 56/78 (71%)
 Frame = -2

Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 331 SNSENQVSLHNELKSADA 278
           S +E+   +  ELK ADA
Sbjct: 72  SRTEDSAKVAEELKRADA 89


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score = 90.1 bits (222), Expect(2) = 3e-36
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVED--TTGRQEKLLLLMQ 40
           +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD  ++      ++ +  +MQ
Sbjct: 90  VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQ 149

Query: 39  EYPEIETCTECSA 1
           ++ EIETC ECSA
Sbjct: 150 QFREIETCIECSA 162



 Score = 87.0 bits (214), Expect(2) = 3e-36
 Identities = 48/78 (61%), Positives = 56/78 (71%)
 Frame = -2

Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 331 SNSENQVSLHNELKSADA 278
           S +E+   +  ELK ADA
Sbjct: 72  SRTEDSAKVAEELKRADA 89


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score = 90.1 bits (222), Expect(2) = 3e-36
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVED--TTGRQEKLLLLMQ 40
           +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD  ++      ++ +  +MQ
Sbjct: 90  VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQ 149

Query: 39  EYPEIETCTECSA 1
           ++ EIETC ECSA
Sbjct: 150 QFREIETCIECSA 162



 Score = 87.0 bits (214), Expect(2) = 3e-36
 Identities = 48/78 (61%), Positives = 56/78 (71%)
 Frame = -2

Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 331 SNSENQVSLHNELKSADA 278
           S +E+   +  ELK ADA
Sbjct: 72  SRTEDSAKVAEELKRADA 89


>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score = 90.1 bits (222), Expect(2) = 5e-36
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40
           +VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD  ++      ++ +  +MQ
Sbjct: 127 VVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQ 186

Query: 39  EYPEIETCTECSA 1
           ++ EIETC ECSA
Sbjct: 187 QFREIETCIECSA 199



 Score = 86.3 bits (212), Expect(2) = 5e-36
 Identities = 49/77 (63%), Positives = 56/77 (72%)
 Frame = -2

Query: 508 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 329
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 54  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 109

Query: 328 NSENQVSLHNELKSADA 278
           + EN+ +L +EL+ ADA
Sbjct: 110 SLENRSALADELRRADA 126


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score = 90.1 bits (222), Expect(2) = 5e-36
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
 Frame = -3

Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40
           +VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD  ++      ++ +  +MQ
Sbjct: 90  VVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQ 149

Query: 39  EYPEIETCTECSA 1
           ++ EIETC ECSA
Sbjct: 150 QFREIETCIECSA 162



 Score = 86.3 bits (212), Expect(2) = 5e-36
 Identities = 49/77 (63%), Positives = 56/77 (72%)
 Frame = -2

Query: 508 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 329
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 17  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 72

Query: 328 NSENQVSLHNELKSADA 278
           + EN+ +L +EL+ ADA
Sbjct: 73  SLENRSALADELRRADA 89


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