BLASTX nr result
ID: Coptis25_contig00000908
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000908 (512 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp.... 91 2e-36 ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [... 90 3e-36 ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [... 90 3e-36 emb|CBI36765.3| unnamed protein product [Vitis vinifera] 90 5e-36 ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis... 90 5e-36 >gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo] Length = 647 Score = 90.5 bits (223), Expect(2) = 2e-36 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%) Frame = -3 Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40 +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD ++ ++ + +MQ Sbjct: 90 VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDENQQVSLEQVMSPIMQ 149 Query: 39 EYPEIETCTECSA 1 ++ EIETC ECSA Sbjct: 150 QFREIETCIECSA 162 Score = 87.0 bits (214), Expect(2) = 2e-36 Identities = 48/78 (61%), Positives = 56/78 (71%) Frame = -2 Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332 +VRIV+AGD GTGKSSLI TAA + FP V +PPVL PTRL DFYPD RVP +IDT Sbjct: 16 EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71 Query: 331 SNSENQVSLHNELKSADA 278 S +E+ + ELK ADA Sbjct: 72 SRTEDSAKVAEELKRADA 89 >ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus] Length = 648 Score = 90.1 bits (222), Expect(2) = 3e-36 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%) Frame = -3 Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVED--TTGRQEKLLLLMQ 40 +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD ++ ++ + +MQ Sbjct: 90 VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQ 149 Query: 39 EYPEIETCTECSA 1 ++ EIETC ECSA Sbjct: 150 QFREIETCIECSA 162 Score = 87.0 bits (214), Expect(2) = 3e-36 Identities = 48/78 (61%), Positives = 56/78 (71%) Frame = -2 Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332 +VRIV+AGD GTGKSSLI TAA + FP V +PPVL PTRL DFYPD RVP +IDT Sbjct: 16 EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71 Query: 331 SNSENQVSLHNELKSADA 278 S +E+ + ELK ADA Sbjct: 72 SRTEDSAKVAEELKRADA 89 >ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus] Length = 647 Score = 90.1 bits (222), Expect(2) = 3e-36 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%) Frame = -3 Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVED--TTGRQEKLLLLMQ 40 +VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD ++ ++ + +MQ Sbjct: 90 VVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQ 149 Query: 39 EYPEIETCTECSA 1 ++ EIETC ECSA Sbjct: 150 QFREIETCIECSA 162 Score = 87.0 bits (214), Expect(2) = 3e-36 Identities = 48/78 (61%), Positives = 56/78 (71%) Frame = -2 Query: 511 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 332 +VRIV+AGD GTGKSSLI TAA + FP V +PPVL PTRL DFYPD RVP +IDT Sbjct: 16 EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71 Query: 331 SNSENQVSLHNELKSADA 278 S +E+ + ELK ADA Sbjct: 72 SRTEDSAKVAEELKRADA 89 >emb|CBI36765.3| unnamed protein product [Vitis vinifera] Length = 684 Score = 90.1 bits (222), Expect(2) = 5e-36 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%) Frame = -3 Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40 +VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD ++ ++ + +MQ Sbjct: 127 VVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQ 186 Query: 39 EYPEIETCTECSA 1 ++ EIETC ECSA Sbjct: 187 QFREIETCIECSA 199 Score = 86.3 bits (212), Expect(2) = 5e-36 Identities = 49/77 (63%), Positives = 56/77 (72%) Frame = -2 Query: 508 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 329 VRIVVAGD GTGKSSLI TAA E FP + PVL PTRL DFYPD RVP +IDT S Sbjct: 54 VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 109 Query: 328 NSENQVSLHNELKSADA 278 + EN+ +L +EL+ ADA Sbjct: 110 SLENRSALADELRRADA 126 >ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera] Length = 647 Score = 90.1 bits (222), Expect(2) = 5e-36 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 2/73 (2%) Frame = -3 Query: 213 IVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQ 40 +VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD ++ ++ + +MQ Sbjct: 90 VVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLRDENQQMSLEQVMSPIMQ 149 Query: 39 EYPEIETCTECSA 1 ++ EIETC ECSA Sbjct: 150 QFREIETCIECSA 162 Score = 86.3 bits (212), Expect(2) = 5e-36 Identities = 49/77 (63%), Positives = 56/77 (72%) Frame = -2 Query: 508 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 329 VRIVVAGD GTGKSSLI TAA E FP + PVL PTRL DFYPD RVP +IDT S Sbjct: 17 VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 72 Query: 328 NSENQVSLHNELKSADA 278 + EN+ +L +EL+ ADA Sbjct: 73 SLENRSALADELRRADA 89