BLASTX nr result

ID: Coptis25_contig00000898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000898
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|2...   367   4e-99
ref|XP_002266816.1| PREDICTED: ABC transporter I family member 1...   363   4e-98
emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]   362   1e-97
ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus...   357   3e-96
ref|NP_176961.1| ABC transporter I family member 17 [Arabidopsis...   355   1e-95

>ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|222866661|gb|EEF03792.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  367 bits (941), Expect = 4e-99
 Identities = 187/240 (77%), Positives = 211/240 (87%)
 Frame = +3

Query: 24  KFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWEPPLDTVF 203
           KFR+R+L KVSDAGV IL G+++DIPKGMIVG+IGPSGSGKST+LRALNRLWEPP  TVF
Sbjct: 37  KFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKSTVLRALNRLWEPPSGTVF 96

Query: 204 FDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVSRLLTLVD 383
            DG D+ DLDVL  RRKVGMLFQLP LF+GTVADNIRYGPQL+G+K+ D EV +LL+L D
Sbjct: 97  LDGHDVKDLDVLGHRRKVGMLFQLPALFDGTVADNIRYGPQLKGKKLTDDEVYKLLSLAD 156

Query: 384 LDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQNIEDAIV 563
           LDSSF  K  NELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPISTQNIED +V
Sbjct: 157 LDSSFYKKTSNELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTQNIEDVLV 212

Query: 564 KLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQRFIELSS 743
           KLKK+  LT +IVSHS+KQIQRIAD+VCLLV+GEIVEVLKP+ LSEAKHPMAQRF++L S
Sbjct: 213 KLKKQQGLTVVIVSHSIKQIQRIADVVCLLVNGEIVEVLKPDDLSEAKHPMAQRFLQLGS 272


>ref|XP_002266816.1| PREDICTED: ABC transporter I family member 17 [Vitis vinifera]
           gi|297735429|emb|CBI17869.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  363 bits (933), Expect = 4e-98
 Identities = 189/247 (76%), Positives = 212/247 (85%)
 Frame = +3

Query: 3   EELDPKLKFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWE 182
           E+ + K KFRVR+L KVS++G  ILRG+ VD+PKG IVGVIGPSGSGKSTLLR LNRLWE
Sbjct: 26  EDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRVLNRLWE 85

Query: 183 PPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVS 362
           PP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFEGTVADNIRYGPQLRG+K+ D EV 
Sbjct: 86  PPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLTDNEVL 145

Query: 363 RLLTLVDLDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQ 542
           +LLTL DLDSSF  K G ELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPISTQ
Sbjct: 146 KLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTQ 201

Query: 543 NIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQ 722
           NIED IVKLKK   +T ++VSHS+KQIQRIAD VCLLVDGEI+EVL+P+ LSEA+HPMA 
Sbjct: 202 NIEDVIVKLKKSRGMTVVMVSHSIKQIQRIADRVCLLVDGEIIEVLEPDKLSEARHPMAL 261

Query: 723 RFIELSS 743
           RF++LSS
Sbjct: 262 RFLQLSS 268


>emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]
          Length = 251

 Score =  362 bits (929), Expect = 1e-97
 Identities = 189/247 (76%), Positives = 211/247 (85%)
 Frame = +3

Query: 3   EELDPKLKFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWE 182
           E+ + K KFRVR+L KVS++G  ILRG+ VD+PKG IVGVIGPSGSGKSTLLR LNRLWE
Sbjct: 9   EDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRVLNRLWE 68

Query: 183 PPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVS 362
           PP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFEGTVADNIRYGPQLRG+K+ D EV 
Sbjct: 69  PPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLTDNEVL 128

Query: 363 RLLTLVDLDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQ 542
           +LLTL DLDSSF  K G ELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPISTQ
Sbjct: 129 KLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTQ 184

Query: 543 NIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQ 722
           NIED IVKLKK   +T ++VSHS+KQIQRIAD VCLLVDGEI EVL+P+ LSEA+HPMA 
Sbjct: 185 NIEDVIVKLKKSRGMTIVMVSHSIKQIQRIADRVCLLVDGEITEVLEPDKLSEARHPMAL 244

Query: 723 RFIELSS 743
           RF++LSS
Sbjct: 245 RFLQLSS 251


>ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus communis]
           gi|223538642|gb|EEF40243.1| phosphate abc transporter,
           putative [Ricinus communis]
          Length = 276

 Score =  357 bits (917), Expect = 3e-96
 Identities = 180/244 (73%), Positives = 210/244 (86%)
 Frame = +3

Query: 12  DPKLKFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWEPPL 191
           D + KFR+R+L + +D G  IL GV++D+PKG+IVG++GPSGSGKST LR+LNRLWEPP 
Sbjct: 37  DNQYKFRIRNLTRETDGGAKILNGVNLDVPKGVIVGIVGPSGSGKSTFLRSLNRLWEPPP 96

Query: 192 DTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVSRLL 371
            TVF DG DI DLDVL+LRRKVGMLFQ+PVLFEGT+ADNIRYGPQLRG+K+ D EV +LL
Sbjct: 97  GTVFLDGCDIRDLDVLSLRRKVGMLFQIPVLFEGTIADNIRYGPQLRGKKLSDNEVHKLL 156

Query: 372 TLVDLDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQNIE 551
            L DLDSSF  KN  ELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPISTQNIE
Sbjct: 157 ILADLDSSFHKKNYGELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTQNIE 212

Query: 552 DAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQRFI 731
           + IVKLKK   +T ++VSHS+KQIQR+AD+VCLLV+GE+VEVLKP  LSEAKHPMAQRF+
Sbjct: 213 EVIVKLKKNQGMTIVMVSHSIKQIQRVADVVCLLVNGEVVEVLKPNELSEAKHPMAQRFL 272

Query: 732 ELSS 743
           +LSS
Sbjct: 273 QLSS 276


>ref|NP_176961.1| ABC transporter I family member 17 [Arabidopsis thaliana]
           gi|75333593|sp|Q9C9W0.1|AB17I_ARATH RecName: Full=ABC
           transporter I family member 17; Short=ABC transporter
           ABCI.17; Short=AtABCI17; AltName: Full=MRP-related
           protein 1; AltName: Full=Non-intrinsic ABC protein 3
           gi|12324076|gb|AAG52004.1|AC012563_14 putative ABC
           transporter; 66585-65723 [Arabidopsis thaliana]
           gi|21554406|gb|AAM63511.1| putative ABC transporter
           [Arabidopsis thaliana] gi|26450485|dbj|BAC42356.1|
           putative ABC transporter [Arabidopsis thaliana]
           gi|28827588|gb|AAO50638.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|298286464|dbj|BAJ09459.1| sensitive to aluminum
           rhizotoxicity 1 [Arabidopsis thaliana]
           gi|332196603|gb|AEE34724.1| ABC transporter I family
           member 17 [Arabidopsis thaliana]
          Length = 263

 Score =  355 bits (912), Expect = 1e-95
 Identities = 180/240 (75%), Positives = 208/240 (86%)
 Frame = +3

Query: 24  KFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWEPPLDTVF 203
           K RV DL +V+D G  IL+GV++DIPKGMIVGVIGPSGSGKST LR+LNRLWEPP  TVF
Sbjct: 28  KIRVHDLTRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVF 87

Query: 204 FDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVSRLLTLVD 383
            DG+DI ++DV+ LRR+VGMLFQLPVLF+GTVADN+RYGP LRGEK+ D EV +LL+L D
Sbjct: 88  LDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLAD 147

Query: 384 LDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQNIEDAIV 563
           LD+SF  K G ELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPIST+NIED IV
Sbjct: 148 LDASFAKKTGAELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTENIEDVIV 203

Query: 564 KLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQRFIELSS 743
           KLKK+  +TT+IVSHS+KQIQ++ADIVCL+VDGEIVEVLKP  LS A HPMAQRF++LSS
Sbjct: 204 KLKKQRGITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRFLQLSS 263


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