BLASTX nr result

ID: Coptis25_contig00000885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000885
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259...   104   7e-21
ref|XP_002518117.1| conserved hypothetical protein [Ricinus comm...   104   7e-21
emb|CBI33363.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_003555492.1| PREDICTED: uncharacterized protein LOC100808...    97   1e-18

>ref|XP_002285669.1| PREDICTED: uncharacterized protein LOC100259626 [Vitis vinifera]
          Length = 372

 Score =  104 bits (260), Expect = 7e-21
 Identities = 71/147 (48%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
 Frame = +2

Query: 8   SLLQEFGHLKKQVQALERQNXXXXXXXXXXXXXXXXXXRAFDSGVNE----------EMK 157
           SLL+E   LK ++Q LE Q+                   A  + + E          E K
Sbjct: 81  SLLREISELKFRIQQLEHQSSVSASIPDIAALLQLPKDSAEVARIAESGSSALPMVLESK 140

Query: 158 KTKNKRVS------SLRKGSEGLLAFPLRNFKEALQKLGFYSGEEDMEFSSFSSGTERAV 319
           + K ++V       +LR GSEG     +R  +EALQ LGFYSGEED+EFSSFSSGTERAV
Sbjct: 141 EVKEEKVGDQKKRKTLRVGSEGE---EVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAV 197

Query: 320 KTRQASLGAFEDGIMTAELLEKLFMAQ 400
           KT QASLGA E+GIMTAELLE+LFM Q
Sbjct: 198 KTWQASLGAPENGIMTAELLERLFMEQ 224


>ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
           gi|223542713|gb|EEF44250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = +2

Query: 158 KTKNKRVSSLRKGSEGLLAFPLRNFKEALQKLGFYSGEEDMEFSSFSSGTERAVKTRQAS 337
           K + KR  +LRKGSEG     +R  +EAL  LGFYSGEEDMEFSSFSSGTERAVKT QAS
Sbjct: 161 KKEEKRRITLRKGSEG---DEVREMQEALLNLGFYSGEEDMEFSSFSSGTERAVKTWQAS 217

Query: 338 LGAFEDGIMTAELLEKLFMAQ 400
           LGA EDGIMTAELLE+L++ Q
Sbjct: 218 LGAPEDGIMTAELLERLYVGQ 238


>emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  102 bits (253), Expect = 4e-20
 Identities = 58/85 (68%), Positives = 66/85 (77%)
 Frame = +2

Query: 146 EEMKKTKNKRVSSLRKGSEGLLAFPLRNFKEALQKLGFYSGEEDMEFSSFSSGTERAVKT 325
           +E K    K+  +LR GSEG     +R  +EALQ LGFYSGEED+EFSSFSSGTERAVKT
Sbjct: 9   KEEKVGDQKKRKTLRVGSEGE---EVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKT 65

Query: 326 RQASLGAFEDGIMTAELLEKLFMAQ 400
            QASLGA E+GIMTAELLE+LFM Q
Sbjct: 66  WQASLGAPENGIMTAELLERLFMEQ 90


>ref|XP_002297812.1| predicted protein [Populus trichocarpa] gi|222845070|gb|EEE82617.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 6/96 (6%)
 Frame = +2

Query: 131 DSGVNEEMKKT------KNKRVSSLRKGSEGLLAFPLRNFKEALQKLGFYSGEEDMEFSS 292
           +  V EE K+       + K   +LRKGSEG     ++  ++ALQKLGFYSGEEDME+SS
Sbjct: 155 EENVVEEQKEVIDRVLEEKKERKTLRKGSEGE---QVKEMQDALQKLGFYSGEEDMEYSS 211

Query: 293 FSSGTERAVKTRQASLGAFEDGIMTAELLEKLFMAQ 400
           FSSGTERAV+T QASLGA EDGIMT ELL++L+M Q
Sbjct: 212 FSSGTERAVRTWQASLGASEDGIMTTELLKRLYMEQ 247


>ref|XP_003555492.1| PREDICTED: uncharacterized protein LOC100808436 [Glycine max]
          Length = 380

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/75 (73%), Positives = 63/75 (84%)
 Frame = +2

Query: 170 KRVSSLRKGSEGLLAFPLRNFKEALQKLGFYSGEEDMEFSSFSSGTERAVKTRQASLGAF 349
           KR+S LR GSEG     +R  +EAL KLGFYSGEEDME+SSFSSGTERAVKT QA+LGA 
Sbjct: 165 KRIS-LRIGSEGE---EVRQMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQAALGAP 220

Query: 350 EDGIMTAELLEKLFM 394
           EDGIMTAELLE+L++
Sbjct: 221 EDGIMTAELLERLYL 235


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