BLASTX nr result

ID: Coptis25_contig00000880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000880
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|3...    98   6e-19
gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK...    98   6e-19
ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|3...    98   6e-19
ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...    98   8e-19
ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis...    97   1e-18

>ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|355511027|gb|AES92169.1|
           20 kDa chaperonin [Medicago truncatula]
          Length = 207

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   GGILLPSTARSKPKXXXXXXXXXXKTLGKNKLEISVKNGAQIVYSKYAGTELEFDGSTHL 182
           GGILLPSTA+SKP+          KT+GKNK++ISVK GAQ+VYSKYAGTE+EFDGS HL
Sbjct: 36  GGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHL 95

Query: 183 LLKEDDI----ETDEVK 221
           +LK++DI    ET+EVK
Sbjct: 96  ILKDEDIVGILETEEVK 112


>gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown
           [Medicago truncatula]
          Length = 253

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   GGILLPSTARSKPKXXXXXXXXXXKTLGKNKLEISVKNGAQIVYSKYAGTELEFDGSTHL 182
           GGILLPSTA+SKP+          KT+GKNK++ISVK GAQ+VYSKYAGTE+EFDGS HL
Sbjct: 82  GGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHL 141

Query: 183 LLKEDDI----ETDEVK 221
           +LK++DI    ET+EVK
Sbjct: 142 ILKDEDIVGILETEEVK 158


>ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|355511026|gb|AES92168.1|
           20 kDa chaperonin [Medicago truncatula]
          Length = 253

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   GGILLPSTARSKPKXXXXXXXXXXKTLGKNKLEISVKNGAQIVYSKYAGTELEFDGSTHL 182
           GGILLPSTA+SKP+          KT+GKNK++ISVK GAQ+VYSKYAGTE+EFDGS HL
Sbjct: 82  GGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHL 141

Query: 183 LLKEDDI----ETDEVK 221
           +LK++DI    ET+EVK
Sbjct: 142 ILKDEDIVGILETEEVK 158


>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   GGILLPSTARSKPKXXXXXXXXXXKTLGKNKLEISVKNGAQIVYSKYAGTELEFDGSTHL 182
           GGILLP+TA++KP+          KT+GKNKL+I VK GAQ+VYSKYAGTE+EF+GS HL
Sbjct: 80  GGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKTGAQVVYSKYAGTEVEFNGSNHL 139

Query: 183 LLKEDDI----ETDEVK 221
           +LKEDDI    ETD+VK
Sbjct: 140 ILKEDDIVGILETDDVK 156


>ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis]
           gi|223544718|gb|EEF46234.1| groes chaperonin, putative
           [Ricinus communis]
          Length = 253

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 62/77 (80%), Gaps = 4/77 (5%)
 Frame = +3

Query: 3   GGILLPSTARSKPKXXXXXXXXXXKTLGKNKLEISVKNGAQIVYSKYAGTELEFDGSTHL 182
           GGILLP++A++KP+          +T+GKNKL+ISVK GAQ+VYSKYAGTE+EF+GS+HL
Sbjct: 82  GGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKTGAQVVYSKYAGTEVEFNGSSHL 141

Query: 183 LLKEDDI----ETDEVK 221
           +LKEDDI    ETD++K
Sbjct: 142 ILKEDDIVGVLETDDIK 158


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