BLASTX nr result

ID: Coptis25_contig00000871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000871
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136629.1| PREDICTED: uncharacterized protein LOC101216...    72   7e-11
gb|AFK42112.1| unknown [Medicago truncatula]                           68   8e-10
ref|XP_003622485.1| NF-kappa-B-activating protein [Medicago trun...    68   8e-10
emb|CBI28704.3| unnamed protein product [Vitis vinifera]               68   8e-10
ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853...    68   8e-10

>ref|XP_004136629.1| PREDICTED: uncharacterized protein LOC101216782 [Cucumis sativus]
           gi|449517926|ref|XP_004165995.1| PREDICTED:
           uncharacterized protein LOC101231705 [Cucumis sativus]
          Length = 531

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   EIPER-HRSRERISPEQQQQGTKTRNYNYKSRDYSRTSPRYDEYDHRNSTGKFLDREYNX 179
           EIPER HRS       +    +     +Y+ R     SP Y+ YD  N   + +   Y  
Sbjct: 9   EIPERRHRSDRENGTHRYSPDSDASRGDYRRR----RSPSYENYDRYNHRRRSVSPGYED 64

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEGDESDEELKGLSYEEYRTTKRIKL 359
                                              E D SDEELKGL+YEEYR  KR KL
Sbjct: 65  VRRSPRVDGDQNGLPKRFGRPGGRAYLDRNGRASDESD-SDEELKGLNYEEYRRLKRQKL 123

Query: 360 RKNIRNCIYRITPSPPRS 413
           RK++++CI+R+TPSPPR+
Sbjct: 124 RKSLKHCIWRVTPSPPRN 141


>gb|AFK42112.1| unknown [Medicago truncatula]
          Length = 486

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 50/137 (36%), Positives = 65/137 (47%)
 Frame = +3

Query: 12  ERHRSRERISPEQQQQGTKTRNYNYKSRDYSRTSPRYDEYDHRNSTGKFLDREYNXXXXX 191
           +RHR R  ISPE        RN  +     S  +    ++ HRN+ G +LDR  +     
Sbjct: 50  DRHRRRS-ISPEN-------RNPRHHDNGNSNGNHLPKKFGHRNN-GSYLDRNDSRR--- 97

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEGDESDEELKGLSYEEYRTTKRIKLRKNI 371
                                       NE    ESDEELKGLSYEEYR  KR K+RK++
Sbjct: 98  ----------------------------NE---SESDEELKGLSYEEYRRLKRQKMRKSL 126

Query: 372 RNCIYRITPSPPRSEWD 422
           ++CI+ +TPSPPR E D
Sbjct: 127 KHCIWNVTPSPPRREND 143


>ref|XP_003622485.1| NF-kappa-B-activating protein [Medicago truncatula]
           gi|355497500|gb|AES78703.1| NF-kappa-B-activating
           protein [Medicago truncatula]
          Length = 488

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 50/137 (36%), Positives = 65/137 (47%)
 Frame = +3

Query: 12  ERHRSRERISPEQQQQGTKTRNYNYKSRDYSRTSPRYDEYDHRNSTGKFLDREYNXXXXX 191
           +RHR R  ISPE        RN  +     S  +    ++ HRN+ G +LDR  +     
Sbjct: 50  DRHRRRS-ISPEN-------RNPRHHDNGNSNGNHLPKKFGHRNN-GSYLDRNDSRR--- 97

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEGDESDEELKGLSYEEYRTTKRIKLRKNI 371
                                       NE    ESDEELKGLSYEEYR  KR K+RK++
Sbjct: 98  ----------------------------NE---SESDEELKGLSYEEYRRLKRQKMRKSL 126

Query: 372 RNCIYRITPSPPRSEWD 422
           ++CI+ +TPSPPR E D
Sbjct: 127 KHCIWNVTPSPPRREND 143


>emb|CBI28704.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
 Frame = +3

Query: 9   PERHRSRE-----RISPEQQQQGTKTRNYNYKSRDYS--RTSPRYDEY-----DHRNSTG 152
           P  HR R      R  P+ +++  +  +    S DY   R SPR D       D +N + 
Sbjct: 29  PRDHRRRRSPDYGRYDPDSERRHRRRSD----SPDYPNPRRSPRSDARRVGSGDRKNRSA 84

Query: 153 KFLDREYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEGDESDEELKGLSYEE 332
            FLDR+Y                                        ESDEELKGLS+EE
Sbjct: 85  TFLDRDYKNGRYSE--------------------------------SESDEELKGLSFEE 112

Query: 333 YRTTKRIKLRKNIRNCIYRITPSPPRS 413
           YR  KR KLR+ +RNCI+ +TPSPPR+
Sbjct: 113 YRRLKRQKLRRMLRNCIWNVTPSPPRN 139


>ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853496 [Vitis vinifera]
          Length = 540

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
 Frame = +3

Query: 9   PERHRSRE-----RISPEQQQQGTKTRNYNYKSRDYS--RTSPRYDEY-----DHRNSTG 152
           P  HR R      R  P+ +++  +  +    S DY   R SPR D       D +N + 
Sbjct: 29  PRDHRRRRSPDYGRYDPDSERRHRRRSD----SPDYPNPRRSPRSDARRVGSGDRKNRSA 84

Query: 153 KFLDREYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEGDESDEELKGLSYEE 332
            FLDR+Y                                        ESDEELKGLS+EE
Sbjct: 85  TFLDRDYKNGRYSE--------------------------------SESDEELKGLSFEE 112

Query: 333 YRTTKRIKLRKNIRNCIYRITPSPPRS 413
           YR  KR KLR+ +RNCI+ +TPSPPR+
Sbjct: 113 YRRLKRQKLRRMLRNCIWNVTPSPPRN 139


Top