BLASTX nr result

ID: Coptis25_contig00000865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000865
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165911.1| PREDICTED: notchless protein homolog, partia...   195   4e-48
ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumi...   195   4e-48
emb|CBI24943.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis ...   194   5e-48
ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47

>ref|XP_004165911.1| PREDICTED: notchless protein homolog, partial [Cucumis sativus]
          Length = 403

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/129 (76%), Positives = 109/129 (84%)
 Frame = -2

Query: 389 DEENMGNNVNVMCILTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLKNEEKLP*AFYISD 210
           D E+     NVM +LTDPEGT LGAPM +PQ AGP QLQQ+VN LL NEEKLP AFYISD
Sbjct: 6   DIEHRETTNNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISD 65

Query: 209 KELLVQLGTYLEKNKVSVEKVLRIVYQPQAIFRIRPVNRCSSTIAGHTEAVLSVSFSPDG 30
           +EL V LG YLEKNKVSVEKVL +VYQPQA+FRIRPV+RCS+TI+GH EAVLSVSFSPDG
Sbjct: 66  QELTVSLGAYLEKNKVSVEKVLTVVYQPQAVFRIRPVSRCSATISGHAEAVLSVSFSPDG 125

Query: 29  RHLASGSGD 3
           R LASGSGD
Sbjct: 126 RQLASGSGD 134


>ref|XP_004149723.1| PREDICTED: notchless protein homolog [Cucumis sativus]
          Length = 478

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/129 (76%), Positives = 109/129 (84%)
 Frame = -2

Query: 389 DEENMGNNVNVMCILTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLKNEEKLP*AFYISD 210
           D E+     NVM +LTDPEGT LGAPM +PQ AGP QLQQ+VN LL NEEKLP AFYISD
Sbjct: 6   DIEHRETTNNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYAFYISD 65

Query: 209 KELLVQLGTYLEKNKVSVEKVLRIVYQPQAIFRIRPVNRCSSTIAGHTEAVLSVSFSPDG 30
           +EL V LG YLEKNKVSVEKVL +VYQPQA+FRIRPV+RCS+TI+GH EAVLSVSFSPDG
Sbjct: 66  QELTVSLGAYLEKNKVSVEKVLTVVYQPQAVFRIRPVSRCSATISGHAEAVLSVSFSPDG 125

Query: 29  RHLASGSGD 3
           R LASGSGD
Sbjct: 126 RQLASGSGD 134


>emb|CBI24943.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  194 bits (494), Expect = 5e-48
 Identities = 100/128 (78%), Positives = 108/128 (84%)
 Frame = -2

Query: 386 EENMGNNVNVMCILTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLKNEEKLP*AFYISDK 207
           EE      NVMC LTDPEG  LG PM +PQ A P +LQQIVN LL NEEKLP AFYISD+
Sbjct: 4   EEQGETGKNVMCQLTDPEGNHLGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQ 63

Query: 206 ELLVQLGTYLEKNKVSVEKVLRIVYQPQAIFRIRPVNRCSSTIAGHTEAVLSVSFSPDGR 27
           EL+VQLGTYL+KNKVSVEKVL IVYQ QA+FRIRP+NRCSSTIAGHTEAVLSV+FSPDGR
Sbjct: 64  ELVVQLGTYLQKNKVSVEKVLPIVYQLQAVFRIRPINRCSSTIAGHTEAVLSVAFSPDGR 123

Query: 26  HLASGSGD 3
            LASGSGD
Sbjct: 124 QLASGSGD 131


>ref|XP_002276009.1| PREDICTED: notchless protein homolog [Vitis vinifera]
          Length = 477

 Score =  194 bits (494), Expect = 5e-48
 Identities = 100/128 (78%), Positives = 108/128 (84%)
 Frame = -2

Query: 386 EENMGNNVNVMCILTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLKNEEKLP*AFYISDK 207
           EE      NVMC LTDPEG  LG PM +PQ A P +LQQIVN LL NEEKLP AFYISD+
Sbjct: 6   EEQGETGKNVMCQLTDPEGNHLGPPMYLPQNAAPKELQQIVNKLLNNEEKLPYAFYISDQ 65

Query: 206 ELLVQLGTYLEKNKVSVEKVLRIVYQPQAIFRIRPVNRCSSTIAGHTEAVLSVSFSPDGR 27
           EL+VQLGTYL+KNKVSVEKVL IVYQ QA+FRIRP+NRCSSTIAGHTEAVLSV+FSPDGR
Sbjct: 66  ELVVQLGTYLQKNKVSVEKVLPIVYQLQAVFRIRPINRCSSTIAGHTEAVLSVAFSPDGR 125

Query: 26  HLASGSGD 3
            LASGSGD
Sbjct: 126 QLASGSGD 133


>ref|XP_002313318.1| predicted protein [Populus trichocarpa] gi|222849726|gb|EEE87273.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  191 bits (486), Expect = 4e-47
 Identities = 98/120 (81%), Positives = 105/120 (87%)
 Frame = -2

Query: 362 NVMCILTDPEGTTLGAPMSVPQIAGPLQLQQIVNDLLKNEEKLP*AFYISDKELLVQLGT 183
           NVMC  TDPEGT LGAP+ +PQ AGP QLQQIVN LL NEEKLP AFYISD+EL+V L T
Sbjct: 8   NVMCQFTDPEGTPLGAPLYLPQNAGPQQLQQIVNKLLNNEEKLPYAFYISDQELVVPLET 67

Query: 182 YLEKNKVSVEKVLRIVYQPQAIFRIRPVNRCSSTIAGHTEAVLSVSFSPDGRHLASGSGD 3
           YL+KNKVSVEKVL IV QPQAIFRIRPVNRCS+TIAGH EAVLSV+FSPDGR LASGSGD
Sbjct: 68  YLQKNKVSVEKVLAIVCQPQAIFRIRPVNRCSATIAGHAEAVLSVAFSPDGRQLASGSGD 127


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