BLASTX nr result

ID: Coptis25_contig00000858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000858
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633033.1| PREDICTED: uncharacterized protein LOC100853...   348   9e-94
emb|CAN80627.1| hypothetical protein VITISV_032619 [Vitis vinifera]   348   9e-94
ref|XP_002532978.1| conserved hypothetical protein [Ricinus comm...   334   1e-89
ref|XP_004162712.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   326   4e-87
ref|XP_002317291.1| predicted protein [Populus trichocarpa] gi|2...   325   5e-87

>ref|XP_003633033.1| PREDICTED: uncharacterized protein LOC100853685 [Vitis vinifera]
          Length = 304

 Score =  348 bits (892), Expect = 9e-94
 Identities = 172/234 (73%), Positives = 197/234 (84%)
 Frame = +3

Query: 3   IMGVDSGKALSLNPLLQSVSLDSIHCIISYLQSKGIHQKDMGRIFGMCPKILTSNIKQDL 182
           IMGVDSGKALSLNP L + +L SIH IIS+LQSKGIHQKD+GRIFGMCPK+LTSNI+ DL
Sbjct: 68  IMGVDSGKALSLNPSLHTATLHSIHSIISFLQSKGIHQKDLGRIFGMCPKLLTSNIRTDL 127

Query: 183 IPVFKFLYNELSVPSHSYRKVINKCPRLLACSVTDQLKPALLYLKRLGFYDLETLAYKDS 362
           IPVF FL  +L VP  S+R+VINKCPRLL  SV DQLKPAL++L+RLGF DLE LA++D 
Sbjct: 128 IPVFNFLSQDLKVPDQSFRRVINKCPRLLVSSVRDQLKPALIFLQRLGFQDLEALAHQDP 187

Query: 363 ILLVSSVEETLIPKLDYLMSLGFSREDAMGMVLRCPGLFTFSIENNFKPKFGYFVXXXXX 542
           +LLVSSVE+TLIPKL+YL+SLG SR DA+GMVLRCPGLFTFS+ENNFKPKF YFV     
Sbjct: 188 VLLVSSVEKTLIPKLEYLVSLGMSRADAVGMVLRCPGLFTFSVENNFKPKFEYFVGEMEG 247

Query: 543 XXXXXXXFPQYFAFSLEKRIKPRHIEVVQSGFKVPLSLMLKSTDEEFMELIKQH 704
                  FPQYFAFSLEKRIKPRH+E VQ+G KVPL+LMLKSTDEEF EL+ +H
Sbjct: 248 NLEELKEFPQYFAFSLEKRIKPRHMEAVQNGVKVPLALMLKSTDEEFRELMTRH 301


>emb|CAN80627.1| hypothetical protein VITISV_032619 [Vitis vinifera]
          Length = 269

 Score =  348 bits (892), Expect = 9e-94
 Identities = 172/234 (73%), Positives = 197/234 (84%)
 Frame = +3

Query: 3   IMGVDSGKALSLNPLLQSVSLDSIHCIISYLQSKGIHQKDMGRIFGMCPKILTSNIKQDL 182
           IMGVDSGKALSLNP L + +L SIH IIS+LQSKGIHQKD+GRIFGMCPK+LTSNI+ DL
Sbjct: 33  IMGVDSGKALSLNPSLHTATLHSIHSIISFLQSKGIHQKDLGRIFGMCPKLLTSNIRTDL 92

Query: 183 IPVFKFLYNELSVPSHSYRKVINKCPRLLACSVTDQLKPALLYLKRLGFYDLETLAYKDS 362
           IPVF FL  +L VP  S+R+VINKCPRLL  SV DQLKPAL++L+RLGF DLE LA++D 
Sbjct: 93  IPVFNFLSQDLKVPDQSFRRVINKCPRLLVSSVRDQLKPALIFLQRLGFQDLEALAHQDP 152

Query: 363 ILLVSSVEETLIPKLDYLMSLGFSREDAMGMVLRCPGLFTFSIENNFKPKFGYFVXXXXX 542
           +LLVSSVE+TLIPKL+YL+SLG SR DA+GMVLRCPGLFTFS+ENNFKPKF YFV     
Sbjct: 153 VLLVSSVEKTLIPKLEYLVSLGMSRADAVGMVLRCPGLFTFSVENNFKPKFEYFVGEMEG 212

Query: 543 XXXXXXXFPQYFAFSLEKRIKPRHIEVVQSGFKVPLSLMLKSTDEEFMELIKQH 704
                  FPQYFAFSLEKRIKPRH+E VQ+G KVPL+LMLKSTDEEF EL+ +H
Sbjct: 213 NLEELKEFPQYFAFSLEKRIKPRHMEAVQNGVKVPLALMLKSTDEEFRELMTRH 266


>ref|XP_002532978.1| conserved hypothetical protein [Ricinus communis]
           gi|223527242|gb|EEF29402.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  334 bits (857), Expect = 1e-89
 Identities = 164/233 (70%), Positives = 192/233 (82%)
 Frame = +3

Query: 3   IMGVDSGKALSLNPLLQSVSLDSIHCIISYLQSKGIHQKDMGRIFGMCPKILTSNIKQDL 182
           IMGVDSGKALS NP L S SLDSIH IIS+LQSKGI ++D+GRIFGMCP+ILTSNIK DL
Sbjct: 66  IMGVDSGKALSQNPSLHSASLDSIHSIISFLQSKGIRERDLGRIFGMCPQILTSNIKTDL 125

Query: 183 IPVFKFLYNELSVPSHSYRKVINKCPRLLACSVTDQLKPALLYLKRLGFYDLETLAYKDS 362
            PVF FLY++L VP +++R+VINKCPRLL C V DQLKP L YL+RLGF DL  LAY+DS
Sbjct: 126 HPVFDFLYHDLKVPENNFRRVINKCPRLLICGVRDQLKPCLFYLQRLGFRDLGALAYQDS 185

Query: 363 ILLVSSVEETLIPKLDYLMSLGFSREDAMGMVLRCPGLFTFSIENNFKPKFGYFVXXXXX 542
           ILLVS VE+TLIPKL YL ++GFS+++ +GMVLRCP LFTFS+ENNFKPKF YFV     
Sbjct: 186 ILLVSDVEKTLIPKLKYLEAIGFSKDEVIGMVLRCPTLFTFSVENNFKPKFEYFVEEMKG 245

Query: 543 XXXXXXXFPQYFAFSLEKRIKPRHIEVVQSGFKVPLSLMLKSTDEEFMELIKQ 701
                  FPQYFAFSLE RIKPRH+E++QSG ++PL +MLKSTDEEF EL+KQ
Sbjct: 246 KLEELKEFPQYFAFSLENRIKPRHLELIQSGAELPLPVMLKSTDEEFKELVKQ 298


>ref|XP_004162712.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229914, partial [Cucumis sativus]
          Length = 282

 Score =  326 bits (835), Expect = 4e-87
 Identities = 163/233 (69%), Positives = 187/233 (80%)
 Frame = +3

Query: 3   IMGVDSGKALSLNPLLQSVSLDSIHCIISYLQSKGIHQKDMGRIFGMCPKILTSNIKQDL 182
           IMGVDSGKALS NP L SV+L+SIH +IS+LQSKGIHQKD  +IFGMCPKILTS++K DL
Sbjct: 47  IMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDL 106

Query: 183 IPVFKFLYNELSVPSHSYRKVINKCPRLLACSVTDQLKPALLYLKRLGFYDLETLAYKDS 362
           +PVF FL  +L +P  ++RK INKCPRLLA S  DQLKPAL YL+RLG  DLE LAY DS
Sbjct: 107 VPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDLEALAYHDS 166

Query: 363 ILLVSSVEETLIPKLDYLMSLGFSREDAMGMVLRCPGLFTFSIENNFKPKFGYFVXXXXX 542
           +LLVSSVE+TLIPKL YL SLGF+R + +GMVLRCP L TFSIENNFKPKF YF      
Sbjct: 167 VLLVSSVEKTLIPKLKYLESLGFTRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHX 226

Query: 543 XXXXXXXFPQYFAFSLEKRIKPRHIEVVQSGFKVPLSLMLKSTDEEFMELIKQ 701
                  FPQYFAFSLEKRIKPR++E V+SG KVPLSLMLK+TD EF EL+ +
Sbjct: 227 KLEELKDFPQYFAFSLEKRIKPRYVETVESGXKVPLSLMLKTTDVEFRELLAE 279


>ref|XP_002317291.1| predicted protein [Populus trichocarpa] gi|222860356|gb|EEE97903.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  325 bits (834), Expect = 5e-87
 Identities = 161/231 (69%), Positives = 185/231 (80%)
 Frame = +3

Query: 6   MGVDSGKALSLNPLLQSVSLDSIHCIISYLQSKGIHQKDMGRIFGMCPKILTSNIKQDLI 185
           MGVDSGKALS NP L + SLDSI  II +LQSKGIHQKD+ RIFGMCPK+LTSNI+ DL 
Sbjct: 1   MGVDSGKALSQNPSLHTASLDSIQSIIFFLQSKGIHQKDLPRIFGMCPKVLTSNIRTDLK 60

Query: 186 PVFKFLYNELSVPSHSYRKVINKCPRLLACSVTDQLKPALLYLKRLGFYDLETLAYKDSI 365
           PVF FL  +L VP +++RK INKCPRLL  SV DQLKP L YL+RLGF DLE LAY+D +
Sbjct: 61  PVFNFLSQDLKVPDNNFRKAINKCPRLLVSSVRDQLKPCLFYLQRLGFEDLEALAYQDPV 120

Query: 366 LLVSSVEETLIPKLDYLMSLGFSREDAMGMVLRCPGLFTFSIENNFKPKFGYFVXXXXXX 545
           LLVS+V+ TLIPKL YL S+GFSR++A+ MVLRCP LFTFS+ENNFKPKF YF       
Sbjct: 121 LLVSNVQNTLIPKLKYLESIGFSRDEAVAMVLRCPALFTFSVENNFKPKFDYFAEEMKGK 180

Query: 546 XXXXXXFPQYFAFSLEKRIKPRHIEVVQSGFKVPLSLMLKSTDEEFMELIK 698
                 FPQYFAFSL+KRIKPRH+EVVQSG K+PL LMLKSTDEEF E+I+
Sbjct: 181 LTELKGFPQYFAFSLDKRIKPRHVEVVQSGVKIPLRLMLKSTDEEFGEMIR 231


Top