BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000856
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272414.1| PREDICTED: putative transcription factor bHL...   208   2e-51
ref|XP_002532470.1| DNA binding protein, putative [Ricinus commu...   203   5e-50
ref|XP_002302962.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_003552876.1| PREDICTED: putative transcription factor bHL...   187   3e-45
ref|XP_002305203.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44

>ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
           gi|296087164|emb|CBI33538.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score =  208 bits (529), Expect = 2e-51
 Identities = 130/255 (50%), Positives = 152/255 (59%), Gaps = 12/255 (4%)
 Frame = -2

Query: 887 NSQEEEAQIVINFKAGYNNSVQPCGPLLNFELGEDTLHNCGPKNRSVIDH-------NYQ 729
           N Q +EA  VI FK  Y N +   G LL+FE  E        K     D+       NY 
Sbjct: 95  NYQPQEAHSVITFKTRYENFMHNSGSLLSFEQNERGSQVTYTKVCHEDDYSNWEDNLNYD 154

Query: 728 WNQFXXXXXXXXXXXXXXXSCFETTS--SSNYRTVKDNQLLDEGLGWFYSDGGAI-EGLE 558
           +                  +CF  +S  S +  T K+NQ  +E  GW Y++  A+ + ++
Sbjct: 155 YQNQLNPKLNSNPRLLEDFNCFPASSYGSMSGNTPKENQHGEESFGWIYTEATAVTDSIQ 214

Query: 557 ESTGTDS--HKRSHMGSEIQCRKMQQLLDGXXXXXXXXXXXXKDPQSIAAKNRRERISER 384
           ES   +S  HKR HMG  +Q  K Q                 KDPQS+AAKNRRERISER
Sbjct: 215 ESATKESCFHKRPHMGETMQALKRQ--CTAATRKSKPKSIPPKDPQSLAAKNRRERISER 272

Query: 383 LKTLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVSQVKEAI 204
           LK LQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP++SQVKEAI
Sbjct: 273 LKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKEAI 332

Query: 203 DAILSSHKDRNSSSK 159
           DAILSS +D NSSSK
Sbjct: 333 DAILSSQRDTNSSSK 347


>ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
           gi|223527828|gb|EEF29926.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 327

 Score =  203 bits (516), Expect = 5e-50
 Identities = 130/249 (52%), Positives = 152/249 (61%), Gaps = 11/249 (4%)
 Frame = -2

Query: 875 EEAQIVINFKAGYNNSVQPCGPLLNFELGE--DTLHNCGPKN-----RSVIDHNYQWNQF 717
           E A  +INF+ GY+  +   G LL+FE      +  + G K          + NYQWNQ 
Sbjct: 82  EGAHSLINFRGGYDGFLHGNGSLLSFEQNNKVSSQTSSGLKEDYSTWEVDFNCNYQWNQM 141

Query: 716 XXXXXXXXXXXXXXXSCFETTSSSNYRTVKDNQLLDEGLGWFYSDGGAI--EGLEESTGT 543
                           CF T  +SN+ ++ +++  D G  W YS+G  I    ++E    
Sbjct: 142 NPKSSADPRLVENIN-CFHT--ASNFNSIDNSEKEDPG-DWLYSEGTIITDHSIQEPGTQ 197

Query: 542 DS--HKRSHMGSEIQCRKMQQLLDGXXXXXXXXXXXXKDPQSIAAKNRRERISERLKTLQ 369
           D+  HKR HMG   Q  K Q   +             KDPQSIAAKNRRERISERLK LQ
Sbjct: 198 DANFHKRPHMGESTQAVKKQ--CNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQ 255

Query: 368 DLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVSQVKEAIDAILS 189
           +LVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP+VSQVKEAIDAILS
Sbjct: 256 ELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDVSQVKEAIDAILS 315

Query: 188 SHKDRNSSS 162
           S KDRNSSS
Sbjct: 316 SQKDRNSSS 324


>ref|XP_002302962.1| predicted protein [Populus trichocarpa] gi|222844688|gb|EEE82235.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  188 bits (478), Expect = 1e-45
 Identities = 121/254 (47%), Positives = 152/254 (59%), Gaps = 12/254 (4%)
 Frame = -2

Query: 887 NSQEEEAQIVINFKA-GYNNSVQPCGPLLNFELGEDTLHNCGPKN-----RSVIDHNYQW 726
           ++Q EEA  +INFK  G+++ +   G L++FE           K+        +  NYQW
Sbjct: 78  DNQVEEAHSLINFKGTGFDSIMHANGSLISFEQSNRVSQTSSHKDDYSAWEGNLSCNYQW 137

Query: 725 NQFXXXXXXXXXXXXXXXSCFETTSSSNYRTVKDNQLLDEGLGWFYSDGGAI--EGLEES 552
           NQ                 C++  S+SN+ ++ ++   +    W Y+    I  + + +S
Sbjct: 138 NQINPKCNANPRLMEDLN-CYQ--SASNFNSITNSAEKENHGDWLYTHESTIVTDSIPDS 194

Query: 551 TGTDS---HKRSHMGSEIQCRKMQQLLDGXXXXXXXXXXXXKDPQSIAAKNRRERISERL 381
              D+   HKR +MG  +Q  K Q+                KDPQSIAAKNRRERISERL
Sbjct: 195 ATPDASSFHKRPNMGESMQALKKQRD-SATKKPKPKSAGPAKDPQSIAAKNRRERISERL 253

Query: 380 KTLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVSQVKEAID 201
           K LQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGKAP++SQVK AID
Sbjct: 254 KMLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVKGAID 313

Query: 200 AILSSH-KDRNSSS 162
           A LSS  KDRNS+S
Sbjct: 314 ATLSSQTKDRNSNS 327


>ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
          Length = 339

 Score =  187 bits (475), Expect = 3e-45
 Identities = 125/260 (48%), Positives = 149/260 (57%), Gaps = 17/260 (6%)
 Frame = -2

Query: 887 NSQEEEAQIVINFKAGYNNSVQPCGPLLNFELGEDTLHNC-----GPKNRSVIDHNYQ-- 729
           N Q EEA  +I+FK GY+N +Q  G LL+F+  +    NC     G K   V ++N    
Sbjct: 84  NYQLEEAVSLIDFK-GYSNILQASGSLLSFQQNKMVPLNCYLKDNGQKEYCVWENNLHQG 142

Query: 728 ---WNQFXXXXXXXXXXXXXXXSCFETTS--SSNYRTVKDNQLLDEGLGWFYSDG---GA 573
              WNQ                +CF+T+S  S      K+ Q      GW YS       
Sbjct: 143 HNHWNQ-TSPRSTRDMRLVENLNCFQTSSGYSPIVNNAKEKQHGQSSSGWLYSAPTIPND 201

Query: 572 IEGLEESTGTDS--HKRSHMGSEIQCRKMQQLLDGXXXXXXXXXXXXKDPQSIAAKNRRE 399
           I  L +S   +S   KR  MG  ++  K Q   +              DPQS+AAKNRRE
Sbjct: 202 ISSLHKSGAQESVLQKRPSMGENMKAAKKQCSTESKTPKHKSSPSK--DPQSVAAKNRRE 259

Query: 398 RISERLKTLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVSQ 219
           RISERLK LQ+LVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWP QGGK PE+SQ
Sbjct: 260 RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKPPEISQ 319

Query: 218 VKEAIDAILSSHKDRNSSSK 159
           VKE ID ILSS ++R+S SK
Sbjct: 320 VKEVIDVILSSQRERSSCSK 339


>ref|XP_002305203.1| predicted protein [Populus trichocarpa] gi|222848167|gb|EEE85714.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  185 bits (469), Expect = 1e-44
 Identities = 120/251 (47%), Positives = 146/251 (58%), Gaps = 11/251 (4%)
 Frame = -2

Query: 881 QEEEAQIVINFKA-GYNNSVQPCGPLLNFELGEDTLHNCGPKN-----RSVIDHNYQWNQ 720
           Q EEA  +I+FK  G++N +   G LL+FE           K+        + +NYQWN+
Sbjct: 87  QAEEAHSLISFKGIGFDNIMHNNGSLLSFEQSSRVSQTSSQKDDYSAWEGNLSYNYQWNE 146

Query: 719 FXXXXXXXXXXXXXXXSCFETTSSSNYRTVKDNQLLDEGLGWFYSDGGAI-EGLEESTGT 543
                            CF+   +    T K+N        W Y++   + + +++S   
Sbjct: 147 MNPKCNTSPRLMEDFN-CFQRAGNFISMTGKENHG-----DWLYAESTIVADSIQDSATP 200

Query: 542 DS---HKRSHMGSEIQCRKMQQLLDGXXXXXXXXXXXXKDPQSIAAKNRRERISERLKTL 372
           D+   HKR +MG  +Q  K Q                 KD QSIAAKNRRERISERLK L
Sbjct: 201 DASSFHKRPNMGESMQALKKQCNNATKKPKPKSAAGPAKDLQSIAAKNRRERISERLKVL 260

Query: 371 QDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEVSQVKEAIDAIL 192
           QDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE WP QGGKAP++SQVKEAIDA+L
Sbjct: 261 QDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDELWPVQGGKAPDISQVKEAIDALL 320

Query: 191 SSH-KDRNSSS 162
           SS  KD NSSS
Sbjct: 321 SSQTKDGNSSS 331