BLASTX nr result
ID: Coptis25_contig00000855
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000855
(2185 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group] 158 2e-56
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 151 2e-56
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza... 158 3e-56
gb|ABA95236.1| AT hook motif-containing protein, putative, expre... 158 3e-56
gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group] 158 3e-56
>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
Length = 1634
Score = 158 bits (399), Expect(2) = 2e-56
Identities = 84/175 (48%), Positives = 111/175 (63%)
Frame = -1
Query: 820 NRLLREELSFDKDLLASEFSQLHNGLNIQQNIXXXXXXXXXXXXXXXVFFVYGSGGMGKT 641
NRLL EE+S+DKD E + LN +Q + + FV G GG GKT
Sbjct: 1131 NRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKT 1190
Query: 640 YLWKTIISRLRFEGKIVLVVASSGIAYLLLHGGRIAHSRFKIPVIADDDSCCNIPIKSQL 461
YLW+ I ++LR EGKIVL VAS GIA LLLHGGR AHSRF IP+I ++S C+I S L
Sbjct: 1191 YLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHL 1250
Query: 460 SCLIQKASLIIWDEAPLNHKNSFEAVDRTLRDLLRGIILDSENRPTFLIQKILAG 296
+ L++K SLI+WDEAP+ ++ FEA+DR+LRD+LR D+ +P + +L G
Sbjct: 1251 AELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGG 1305
Score = 90.1 bits (222), Expect(2) = 2e-56
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = -3
Query: 1232 GPWCYEDIRKVSGVTYPDFKPACLALGLLEDAQEWDETLVKAG-WSTGSSLRELFVTLLL 1056
GP +E+IR V GV +P FK AC ALG L+D +EW E + +A +++G+ LR LF T+L
Sbjct: 992 GPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILC 1051
Query: 1055 FCEVTNPLELWSRHWELLLDDILHREWRESGDLTLQLSEAE 933
CEVT+P +W WE L +DI +++ + TL+L+E +
Sbjct: 1052 HCEVTDPKRIWESCWEDLSEDIEYKQRKNLNYPTLRLTEQQ 1092
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
vulgaris subsp. vulgaris]
Length = 2037
Score = 151 bits (382), Expect(2) = 2e-56
Identities = 80/155 (51%), Positives = 105/155 (67%)
Frame = -1
Query: 820 NRLLREELSFDKDLLASEFSQLHNGLNIQQNIXXXXXXXXXXXXXXXVFFVYGSGGMGKT 641
NRL+ EELS+DKD L E +QL L +Q VFF+ G GG GKT
Sbjct: 1577 NRLIHEELSYDKDSLRVEHNQLLLSLTEEQKGVYDKIMNAVSRGEGGVFFLNGFGGTGKT 1636
Query: 640 YLWKTIISRLRFEGKIVLVVASSGIAYLLLHGGRIAHSRFKIPVIADDDSCCNIPIKSQL 461
++W+T+ + LR +G+IVL VASSGIA LLL GGR AHSRF IP+ ++DS C I S+L
Sbjct: 1637 FVWRTLSAALRSQGEIVLNVASSGIASLLLSGGRTAHSRFSIPININEDSICGIKPGSEL 1696
Query: 460 SCLIQKASLIIWDEAPLNHKNSFEAVDRTLRDLLR 356
+ L+++ LIIWDEAP+ HK+ FEA+DRTL+D+LR
Sbjct: 1697 AILLERTKLIIWDEAPMVHKHCFEALDRTLKDILR 1731
Score = 96.3 bits (238), Expect(2) = 2e-56
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = -3
Query: 1241 EL*GPWCYEDIRKVSGVTYPDFKPACLALGLLEDAQEWDETLVKAG-WSTGSSLRELFVT 1065
EL G CYEDIR V GV YP FK AC ALGLL+D +E+ E + +A W TG LR LF
Sbjct: 1435 ELKGATCYEDIRTVDGVVYPTFKEACYALGLLDDDKEYIEGIHEASFWGTGHYLRSLFAM 1494
Query: 1064 LLLFCEVTNPLELWSRHWELLLDDILHREWRESGDLTLQLSEAELR 927
LL+ ++ P +W + W LL +DI+HR+ + LQLS+ +LR
Sbjct: 1495 LLISDSLSRPDFVWEKTWHLLSEDIIHRQRNIMQNNDLQLSDDQLR 1540
>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 1682
Score = 158 bits (399), Expect(2) = 3e-56
Identities = 84/175 (48%), Positives = 111/175 (63%)
Frame = -1
Query: 820 NRLLREELSFDKDLLASEFSQLHNGLNIQQNIXXXXXXXXXXXXXXXVFFVYGSGGMGKT 641
NRLL EE+S+DKD E + LN +Q + + FV G GG GKT
Sbjct: 1179 NRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKT 1238
Query: 640 YLWKTIISRLRFEGKIVLVVASSGIAYLLLHGGRIAHSRFKIPVIADDDSCCNIPIKSQL 461
YLW+ I ++LR EGKIVL VAS GIA LLLHGGR AHSRF IP+I ++S C+I S L
Sbjct: 1239 YLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHL 1298
Query: 460 SCLIQKASLIIWDEAPLNHKNSFEAVDRTLRDLLRGIILDSENRPTFLIQKILAG 296
+ L++K SLI+WDEAP+ ++ FEA+DR+LRD+LR D+ +P + +L G
Sbjct: 1299 AELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGG 1353
Score = 89.4 bits (220), Expect(2) = 3e-56
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = -3
Query: 1232 GPWCYEDIRKVSGVTYPDFKPACLALGLLEDAQEWDETLVKAG-WSTGSSLRELFVTLLL 1056
GP +E+IR V GV +P FK AC ALG L+D +EW E + +A +++G+ LR LF T+L
Sbjct: 1040 GPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILC 1099
Query: 1055 FCEVTNPLELWSRHWELLLDDILHREWRESGDLTLQLSEAE 933
CEVT+P +W WE L +DI +++ + TL+L+E +
Sbjct: 1100 HCEVTDPKRIWESCWEDLGEDIEYKQRKNLNYPTLRLTEQQ 1140
>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1682
Score = 158 bits (399), Expect(2) = 3e-56
Identities = 84/175 (48%), Positives = 111/175 (63%)
Frame = -1
Query: 820 NRLLREELSFDKDLLASEFSQLHNGLNIQQNIXXXXXXXXXXXXXXXVFFVYGSGGMGKT 641
NRLL EE+S+DKD E + LN +Q + + FV G GG GKT
Sbjct: 1179 NRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKT 1238
Query: 640 YLWKTIISRLRFEGKIVLVVASSGIAYLLLHGGRIAHSRFKIPVIADDDSCCNIPIKSQL 461
YLW+ I ++LR EGKIVL VAS GIA LLLHGGR AHSRF IP+I ++S C+I S L
Sbjct: 1239 YLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHL 1298
Query: 460 SCLIQKASLIIWDEAPLNHKNSFEAVDRTLRDLLRGIILDSENRPTFLIQKILAG 296
+ L++K SLI+WDEAP+ ++ FEA+DR+LRD+LR D+ +P + +L G
Sbjct: 1299 AELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGG 1353
Score = 89.4 bits (220), Expect(2) = 3e-56
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = -3
Query: 1232 GPWCYEDIRKVSGVTYPDFKPACLALGLLEDAQEWDETLVKAG-WSTGSSLRELFVTLLL 1056
GP +E+IR V GV +P FK AC ALG L+D +EW E + +A +++G+ LR LF T+L
Sbjct: 1040 GPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILC 1099
Query: 1055 FCEVTNPLELWSRHWELLLDDILHREWRESGDLTLQLSEAE 933
CEVT+P +W WE L +DI +++ + TL+L+E +
Sbjct: 1100 HCEVTDPKRIWESCWEDLGEDIEYKQRKNLNYPTLRLTEQQ 1140
>gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]
Length = 1525
Score = 158 bits (399), Expect(2) = 3e-56
Identities = 84/175 (48%), Positives = 111/175 (63%)
Frame = -1
Query: 820 NRLLREELSFDKDLLASEFSQLHNGLNIQQNIXXXXXXXXXXXXXXXVFFVYGSGGMGKT 641
NRLL EE+S+DKD E + LN +Q + + FV G GG GKT
Sbjct: 1022 NRLLNEEMSYDKDKQKEEHDSIFGKLNAEQKVAFDSIIESTNKGLGKLMFVDGYGGTGKT 1081
Query: 640 YLWKTIISRLRFEGKIVLVVASSGIAYLLLHGGRIAHSRFKIPVIADDDSCCNIPIKSQL 461
YLW+ I ++LR EGKIVL VAS GIA LLLHGGR AHSRF IP+I ++S C+I S L
Sbjct: 1082 YLWRAITTKLRSEGKIVLTVASCGIAALLLHGGRTAHSRFHIPLIVTEESTCDIKQGSHL 1141
Query: 460 SCLIQKASLIIWDEAPLNHKNSFEAVDRTLRDLLRGIILDSENRPTFLIQKILAG 296
+ L++K SLI+WDEAP+ ++ FEA+DR+LRD+LR D+ +P + +L G
Sbjct: 1142 AELLKKTSLILWDEAPMANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGG 1196
Score = 89.4 bits (220), Expect(2) = 3e-56
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = -3
Query: 1232 GPWCYEDIRKVSGVTYPDFKPACLALGLLEDAQEWDETLVKAG-WSTGSSLRELFVTLLL 1056
GP +E+IR V GV +P FK AC ALG L+D +EW E + +A +++G+ LR LF T+L
Sbjct: 883 GPRTFEEIRTVDGVVHPSFKSACEALGFLDDDREWVECIREASNYASGNQLRHLFTTILC 942
Query: 1055 FCEVTNPLELWSRHWELLLDDILHREWRESGDLTLQLSEAE 933
CEVT+P +W WE L +DI +++ + TL+L+E +
Sbjct: 943 HCEVTDPKRIWESCWEDLGEDIEYKQRKNLNYPTLRLTEQQ 983