BLASTX nr result
ID: Coptis25_contig00000853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000853
(2338 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2... 923 0.0
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro... 922 0.0
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2... 912 0.0
ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding pro... 912 0.0
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro... 910 0.0
>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 923 bits (2385), Expect = 0.0
Identities = 494/588 (84%), Positives = 527/588 (89%)
Frame = +3
Query: 108 MASANALTTSSILQFPTQGSLSNRTNQRQKLNCRPFTARKATRFVVRANAKEIAFGQASR 287
MA++NAL+T+SIL P QG L + NQ+ N R + RF VRANAK+IAF Q SR
Sbjct: 1 MATSNALSTASILCSPKQGGLRRKGNQQH--NSRLNFGQSTRRFAVRANAKDIAFDQDSR 58
Query: 288 TALQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALI 467
ALQ+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALI
Sbjct: 59 AALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALI 118
Query: 468 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTIQGLVAELEKK 647
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKT+QGLV ELEK+
Sbjct: 119 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKR 178
Query: 648 ARSIEGRDDVKAVATISAGNDEDIGIMIADAIDKVGADGVLSIESSSSFETTVDVEEGME 827
AR ++GRDD+KAVATISAGNDE IG MIADAIDKVG DGVLSIESSSSFETTV+VEEGME
Sbjct: 179 ARPVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 238
Query: 828 IDRGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRSPLLIIAEDV 1007
IDRGYISPQFVTNPEKLI FENA+VLVTDQKIS+IKDIIPLLEKTTQLRSPLLIIAEDV
Sbjct: 239 IDRGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 298
Query: 1008 TGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLMIENTEV 1187
TGEALATLVVNKLRGI+NV+AIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IENT +
Sbjct: 299 TGEALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSI 358
Query: 1188 EQLGIARKVTISKDSTTIIADAASKDEIHARIAQIKRELSETDSVYDSEKLAERIAKLSG 1367
EQLG+ARKVTISKDSTTIIADAASKDE+ ARIAQ+K+ELSETDSVYDSEKLAERIAKLSG
Sbjct: 359 EQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSG 418
Query: 1368 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKEKFD 1547
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIKEK
Sbjct: 419 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIK 478
Query: 1548 DADERLGADIVQKALVAPASLIAHNXXXXXXXXXXXXXXXXWEIGYNAMTDKYENLIQSG 1727
DADERLGADIVQKALVAPASLIA N WE+GYNAMTDKYENL+++G
Sbjct: 479 DADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAG 538
Query: 1728 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKRKXXXXXXPQGLTV 1871
VIDPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK + PQGLTV
Sbjct: 539 VIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586
>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Vitis vinifera]
Length = 586
Score = 922 bits (2384), Expect = 0.0
Identities = 494/590 (83%), Positives = 530/590 (89%), Gaps = 2/590 (0%)
Frame = +3
Query: 108 MASANALTTSSILQFPTQGSLSNRTNQRQ--KLNCRPFTARKATRFVVRANAKEIAFGQA 281
MASANA++T+SI++ P Q S R NQ+Q K N RP RFVVRA+AKEIAF Q+
Sbjct: 1 MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSN----NRFVVRASAKEIAFDQS 56
Query: 282 SRTALQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAA 461
SR ALQAGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIELAD MENAGAA
Sbjct: 57 SRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAA 116
Query: 462 LIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTIQGLVAELE 641
LIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKT+ LV ELE
Sbjct: 117 LIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELE 176
Query: 642 KKARSIEGRDDVKAVATISAGNDEDIGIMIADAIDKVGADGVLSIESSSSFETTVDVEEG 821
KKAR +EG DD+KAVA+ISAGNDE IG MIADAI+KVG DGVLSIESSSSFETTVDVEEG
Sbjct: 177 KKARPVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEG 236
Query: 822 MEIDRGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRSPLLIIAE 1001
MEIDRGYISPQFVTNPEKLIAEFENA+VLVTDQKI++IKDIIPLLEKTTQLRSPLLI+AE
Sbjct: 237 MEIDRGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAE 296
Query: 1002 DVTGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLMIENT 1181
DVTGEALATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAI+TGAEFQA+DLGL+IENT
Sbjct: 297 DVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENT 356
Query: 1182 EVEQLGIARKVTISKDSTTIIADAASKDEIHARIAQIKRELSETDSVYDSEKLAERIAKL 1361
VEQLG+ARKVTI+KDSTTIIADAASKDEI ARIAQIK+EL+ETDSVYD+EKLAERIAKL
Sbjct: 357 SVEQLGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKL 416
Query: 1362 SGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKEK 1541
SGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIK+K
Sbjct: 417 SGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDK 476
Query: 1542 FDDADERLGADIVQKALVAPASLIAHNXXXXXXXXXXXXXXXXWEIGYNAMTDKYENLIQ 1721
+DADERLGADIVQKALVAPASLIAHN W +GYNAMTDKYENL++
Sbjct: 477 LEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVE 536
Query: 1722 SGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKRKXXXXXXPQGLTV 1871
+GVIDPAKV RCALQNAASVAGMVLTTQAIVVEK K K PQGLT+
Sbjct: 537 AGVIDPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586
>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
predicted protein [Populus trichocarpa]
Length = 587
Score = 912 bits (2357), Expect = 0.0
Identities = 487/585 (83%), Positives = 524/585 (89%)
Frame = +3
Query: 108 MASANALTTSSILQFPTQGSLSNRTNQRQKLNCRPFTARKATRFVVRANAKEIAFGQASR 287
MA++NAL+T+SIL P QG L R NQ+ N R + RF VRANAK+IAF Q SR
Sbjct: 1 MATSNALSTASILCSPKQGGLRRRGNQQN--NSRLNYGLSSRRFSVRANAKDIAFDQKSR 58
Query: 288 TALQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALI 467
ALQ+GIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALI
Sbjct: 59 AALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALI 118
Query: 468 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTIQGLVAELEKK 647
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIK+GIDKT+QGLV ELEKK
Sbjct: 119 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKK 178
Query: 648 ARSIEGRDDVKAVATISAGNDEDIGIMIADAIDKVGADGVLSIESSSSFETTVDVEEGME 827
AR ++GRDD+KAVA+ISAGNDE IG MIADAIDKVG DGVLSIESSSSFET V+VEEGME
Sbjct: 179 ARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGME 238
Query: 828 IDRGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRSPLLIIAEDV 1007
IDRGYISPQFVTNPEKLI EFENA+VL+TDQKI++IKDIIPLLEKTTQLR+PLLIIAEDV
Sbjct: 239 IDRGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDV 298
Query: 1008 TGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLMIENTEV 1187
TGEALATLVVNKLRG++NVAAIKAPGFGERRKA+LQDIAILTGAEFQASDLGL IENT +
Sbjct: 299 TGEALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSI 358
Query: 1188 EQLGIARKVTISKDSTTIIADAASKDEIHARIAQIKRELSETDSVYDSEKLAERIAKLSG 1367
EQLG+ARKVTISKDSTTIIADAASKDE+ ARIAQ+K+ELSETDSVYDSEKLAERIAKLSG
Sbjct: 359 EQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSG 418
Query: 1368 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKEKFD 1547
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAIK+K +
Sbjct: 419 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIE 478
Query: 1548 DADERLGADIVQKALVAPASLIAHNXXXXXXXXXXXXXXXXWEIGYNAMTDKYENLIQSG 1727
DADERLGADIVQKALV+PASLIA N WEIGYNAMTDKYENL+++G
Sbjct: 479 DADERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAG 538
Query: 1728 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKRKXXXXXXPQG 1862
VIDPAKVTRCALQN+ASVAGMVLTTQAIVVEKPK K QG
Sbjct: 539 VIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQG 583
>ref|XP_003538152.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like isoform 1 [Glycine max]
Length = 584
Score = 912 bits (2356), Expect = 0.0
Identities = 480/588 (81%), Positives = 530/588 (90%)
Frame = +3
Query: 108 MASANALTTSSILQFPTQGSLSNRTNQRQKLNCRPFTARKATRFVVRANAKEIAFGQASR 287
MAS NAL+++SIL+ P + SL+ R N ++N R + +RF V+A+AKEIAF Q SR
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYR----QPNSRFSVKASAKEIAFDQHSR 56
Query: 288 TALQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALI 467
+A+QAGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALI
Sbjct: 57 SAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALI 116
Query: 468 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTIQGLVAELEKK 647
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKT+QGLV ELEKK
Sbjct: 117 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKK 176
Query: 648 ARSIEGRDDVKAVATISAGNDEDIGIMIADAIDKVGADGVLSIESSSSFETTVDVEEGME 827
AR ++G DD+KAVA+ISAGNDE IG MIA+AIDKVG DGVLSIESSSSFETTV+VEEGME
Sbjct: 177 ARPVKGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGME 236
Query: 828 IDRGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRSPLLIIAEDV 1007
IDRGYISPQFVTNPEKLI EFENA+VL+TDQKIS+IKDIIPLLEKTTQLR+PLLIIAEDV
Sbjct: 237 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV 296
Query: 1008 TGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLMIENTEV 1187
TGEALATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGL++ENT V
Sbjct: 297 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSV 356
Query: 1188 EQLGIARKVTISKDSTTIIADAASKDEIHARIAQIKRELSETDSVYDSEKLAERIAKLSG 1367
EQLG+ARK+TISKDSTTIIADAA+KDE+ AR+AQ+K+ELS+TDSVYD+EKLAERIAKLSG
Sbjct: 357 EQLGLARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSG 416
Query: 1368 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKEKFD 1547
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPA+K+K D
Sbjct: 417 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLD 476
Query: 1548 DADERLGADIVQKALVAPASLIAHNXXXXXXXXXXXXXXXXWEIGYNAMTDKYENLIQSG 1727
DADERLGADIVQKAL+APA+LIA N WE+GYNAM D+YENL+++G
Sbjct: 477 DADERLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAG 536
Query: 1728 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKRKXXXXXXPQGLTV 1871
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK K PQGLTV
Sbjct: 537 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584
>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Glycine max]
Length = 584
Score = 910 bits (2353), Expect = 0.0
Identities = 479/588 (81%), Positives = 529/588 (89%)
Frame = +3
Query: 108 MASANALTTSSILQFPTQGSLSNRTNQRQKLNCRPFTARKATRFVVRANAKEIAFGQASR 287
MAS NAL+++SIL+ P + SL+ R N ++N R + RF V+A+AKEIAF Q SR
Sbjct: 1 MASTNALSSASILRSPNRQSLTRRANHNGRVNYR----KPNNRFSVKASAKEIAFDQHSR 56
Query: 288 TALQAGIDKLADAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELADPMENAGAALI 467
+A+QAGIDKLADAVG+TLGPRGRNVVLDE+GSPKVVNDGVTIARAIEL DPMENAGAALI
Sbjct: 57 SAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALI 116
Query: 468 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTIQGLVAELEKK 647
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKT+QGLV ELEKK
Sbjct: 117 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKK 176
Query: 648 ARSIEGRDDVKAVATISAGNDEDIGIMIADAIDKVGADGVLSIESSSSFETTVDVEEGME 827
AR ++G DD+KAVA+ISAGNDE IG MIA+AIDKVG DGVLSIESSSSFETTV+VEEGME
Sbjct: 177 ARPVKGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGME 236
Query: 828 IDRGYISPQFVTNPEKLIAEFENAKVLVTDQKISSIKDIIPLLEKTTQLRSPLLIIAEDV 1007
IDRGYISPQFVTNPEKLI EFENA+VL+TDQKIS+IKDIIPLLEKTTQLR+PLLIIAEDV
Sbjct: 237 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDV 296
Query: 1008 TGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLMIENTEV 1187
TGEALATLVVNKLRGI+NVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGL++ENT V
Sbjct: 297 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSV 356
Query: 1188 EQLGIARKVTISKDSTTIIADAASKDEIHARIAQIKRELSETDSVYDSEKLAERIAKLSG 1367
EQLG+ARK+TISKDSTT+IADAA+KDE+ AR+AQ+K+ELS+TDSVYD+EKLAERIAKLSG
Sbjct: 357 EQLGLARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSG 416
Query: 1368 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSMFVPAIKEKFD 1547
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS VPAIK+K +
Sbjct: 417 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAIKDKLE 476
Query: 1548 DADERLGADIVQKALVAPASLIAHNXXXXXXXXXXXXXXXXWEIGYNAMTDKYENLIQSG 1727
DADERLGADIVQKAL+APA+LIA N WE+GYNAM D+YENL+++G
Sbjct: 477 DADERLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYENLVEAG 536
Query: 1728 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKRKXXXXXXPQGLTV 1871
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK K PQGLTV
Sbjct: 537 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584