BLASTX nr result

ID: Coptis25_contig00000852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000852
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267944.2| PREDICTED: protein ACCUMULATION AND REPLICAT...   431   e-118
emb|CBI27516.3| unnamed protein product [Vitis vinifera]              431   e-118
emb|CAN65183.1| hypothetical protein VITISV_018355 [Vitis vinifera]   414   e-113
ref|XP_002521879.1| 1-phosphatidylinositol-4-phosphate 5-kinase,...   378   e-102
dbj|BAD26753.1| ARC3 homologue [Oryza sativa Japonica Group]          326   1e-86

>ref|XP_002267944.2| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS
            3-like [Vitis vinifera]
          Length = 727

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/416 (53%), Positives = 282/416 (67%), Gaps = 13/416 (3%)
 Frame = -3

Query: 1808 EKVSQTNGILSGLAQRFPFVLSLFGRDRPESKEPLPDHLIESPYAVEHTSSMSTEAMVXX 1629
            +  SQ + ILS LAQ FPF+ +L G    +         IE P   +  ++  +  M   
Sbjct: 313  QPASQKSSILSQLAQHFPFIFNLLGGHHLQPNGTQESPSIEGPGLPKLINAHDSGEMQTG 372

Query: 1628 XXXXXXXXXXNRYLDKLQSPSGRKYTE----------HERTKVEISSAS-DNLLPDDYNQ 1482
                      + Y ++LQ   GR   E          +E++++  S A+ D+L  +D N 
Sbjct: 373  IPMDGIADDMDMYSEELQMLLGRNDHEINASRDSNGRYEQSELGCSEATIDSLNFNDQN- 431

Query: 1481 ISQDEPPFDREPLIWWN-GPSFDVAEEWAKERAAISGSNTVLGNQCTYTLPVGVKPSERS 1305
             ++    F REPLI WN GP   +A+EWAKERAA SG+ T L N   + LPVGV+P E  
Sbjct: 432  -TEGISAFQREPLIGWNLGPGDQIAQEWAKERAADSGATTTLDNLSIFHLPVGVRPLEEL 490

Query: 1304 METPEFTNM-QSLKSRISNDMNGKTPGSPNVPSWDALTDAGVEAVMDIYNATSTILKGKN 1128
             ++P  +N  Q  +++I +++  +   +  +P WD LT AG EAVMD+YN+ ST+LKGK 
Sbjct: 491  NDSPNISNTTQHPETKIGDEIKAQPLVTSRMP-WDELTGAGFEAVMDLYNSASTVLKGKY 549

Query: 1127 NYTSKKPGLLSTRAASMLESERDSQKKWAPIIQMQYRGGSYRGRCQGGLPEGKGRLTLVD 948
                KK G+LS RAASMLESERDSQKKW+PI+QMQYRGG Y+GRCQGGLPEGKGRL+L D
Sbjct: 550  ADIPKKQGMLSVRAASMLESERDSQKKWSPIVQMQYRGGIYQGRCQGGLPEGKGRLSLRD 609

Query: 947  GSIYDGVWRYGKKSGVGTFYYSNGDVFQGSWRDDLMHGKGWFYFRSGDRWFANFWKGKAN 768
            GSIYDG+WRYGK+SG GT Y+ NGDVFQGSWRDD+MHGKGWFYF SGDRWFANFWKGKAN
Sbjct: 610  GSIYDGMWRYGKRSGPGTLYFCNGDVFQGSWRDDVMHGKGWFYFHSGDRWFANFWKGKAN 669

Query: 767  GEGRFYSKNGEIFFGHFEDGWRHGHSLCISADGVRWTEIWDEGVLLGCEQLDSD*G 600
            GEGRFYSK G++FFGHF+DGWRHGH LCI+ +G R  E+WDEGVL+  EQLDSD G
Sbjct: 670  GEGRFYSKFGDVFFGHFKDGWRHGHFLCINVNGERCVEVWDEGVLVSREQLDSDTG 725


>emb|CBI27516.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/416 (53%), Positives = 282/416 (67%), Gaps = 13/416 (3%)
 Frame = -3

Query: 1808 EKVSQTNGILSGLAQRFPFVLSLFGRDRPESKEPLPDHLIESPYAVEHTSSMSTEAMVXX 1629
            +  SQ + ILS LAQ FPF+ +L G    +         IE P   +  ++  +  M   
Sbjct: 282  QPASQKSSILSQLAQHFPFIFNLLGGHHLQPNGTQESPSIEGPGLPKLINAHDSGEMQTG 341

Query: 1628 XXXXXXXXXXNRYLDKLQSPSGRKYTE----------HERTKVEISSAS-DNLLPDDYNQ 1482
                      + Y ++LQ   GR   E          +E++++  S A+ D+L  +D N 
Sbjct: 342  IPMDGIADDMDMYSEELQMLLGRNDHEINASRDSNGRYEQSELGCSEATIDSLNFNDQN- 400

Query: 1481 ISQDEPPFDREPLIWWN-GPSFDVAEEWAKERAAISGSNTVLGNQCTYTLPVGVKPSERS 1305
             ++    F REPLI WN GP   +A+EWAKERAA SG+ T L N   + LPVGV+P E  
Sbjct: 401  -TEGISAFQREPLIGWNLGPGDQIAQEWAKERAADSGATTTLDNLSIFHLPVGVRPLEEL 459

Query: 1304 METPEFTNM-QSLKSRISNDMNGKTPGSPNVPSWDALTDAGVEAVMDIYNATSTILKGKN 1128
             ++P  +N  Q  +++I +++  +   +  +P WD LT AG EAVMD+YN+ ST+LKGK 
Sbjct: 460  NDSPNISNTTQHPETKIGDEIKAQPLVTSRMP-WDELTGAGFEAVMDLYNSASTVLKGKY 518

Query: 1127 NYTSKKPGLLSTRAASMLESERDSQKKWAPIIQMQYRGGSYRGRCQGGLPEGKGRLTLVD 948
                KK G+LS RAASMLESERDSQKKW+PI+QMQYRGG Y+GRCQGGLPEGKGRL+L D
Sbjct: 519  ADIPKKQGMLSVRAASMLESERDSQKKWSPIVQMQYRGGIYQGRCQGGLPEGKGRLSLRD 578

Query: 947  GSIYDGVWRYGKKSGVGTFYYSNGDVFQGSWRDDLMHGKGWFYFRSGDRWFANFWKGKAN 768
            GSIYDG+WRYGK+SG GT Y+ NGDVFQGSWRDD+MHGKGWFYF SGDRWFANFWKGKAN
Sbjct: 579  GSIYDGMWRYGKRSGPGTLYFCNGDVFQGSWRDDVMHGKGWFYFHSGDRWFANFWKGKAN 638

Query: 767  GEGRFYSKNGEIFFGHFEDGWRHGHSLCISADGVRWTEIWDEGVLLGCEQLDSD*G 600
            GEGRFYSK G++FFGHF+DGWRHGH LCI+ +G R  E+WDEGVL+  EQLDSD G
Sbjct: 639  GEGRFYSKFGDVFFGHFKDGWRHGHFLCINVNGERCVEVWDEGVLVSREQLDSDTG 694


>emb|CAN65183.1| hypothetical protein VITISV_018355 [Vitis vinifera]
          Length = 359

 Score =  414 bits (1064), Expect = e-113
 Identities = 207/344 (60%), Positives = 255/344 (74%), Gaps = 13/344 (3%)
 Frame = -3

Query: 1592 YLDKLQSPSGRKYTE----------HERTKVEISSAS-DNLLPDDYNQISQDEPPFDREP 1446
            Y ++LQ   GR   E          +E++++  S A+ D+L  +D N  ++    F REP
Sbjct: 17   YSEELQMLLGRNDHEINASRDSNGRYEQSELGCSEATIDSLNFNDQN--TEGISAFQREP 74

Query: 1445 LIWWN-GPSFDVAEEWAKERAAISGSNTVLGNQCTYTLPVGVKPSERSMETPEFTNM-QS 1272
            LI WN GP   +A+EWAKERAA SG+ T L N   + LPVGV+P E   ++P  +N  Q 
Sbjct: 75   LIGWNLGPGDQIAQEWAKERAADSGATTTLDNLSIFHLPVGVRPLEELNDSPNISNTTQH 134

Query: 1271 LKSRISNDMNGKTPGSPNVPSWDALTDAGVEAVMDIYNATSTILKGKNNYTSKKPGLLST 1092
             +++I +++  +   +  +P WD LT AG EAVMD+YN+ ST+LKGK     KK G+LS 
Sbjct: 135  PETKIGDEIKAQPLVTSRMP-WDELTGAGFEAVMDLYNSASTVLKGKYADIPKKQGMLSV 193

Query: 1091 RAASMLESERDSQKKWAPIIQMQYRGGSYRGRCQGGLPEGKGRLTLVDGSIYDGVWRYGK 912
            RAASMLESERDSQKKW+PI+QMQYRGG Y+GRCQGGLPEGKGRL+L DGSIYDG+WRYGK
Sbjct: 194  RAASMLESERDSQKKWSPIVQMQYRGGIYQGRCQGGLPEGKGRLSLRDGSIYDGMWRYGK 253

Query: 911  KSGVGTFYYSNGDVFQGSWRDDLMHGKGWFYFRSGDRWFANFWKGKANGEGRFYSKNGEI 732
            +SG GT Y+ NGDVFQGSWRDD+MHGKGWFYF SGDRWFANFWKGKANGEGRFYSK G++
Sbjct: 254  RSGPGTLYFCNGDVFQGSWRDDVMHGKGWFYFHSGDRWFANFWKGKANGEGRFYSKFGDV 313

Query: 731  FFGHFEDGWRHGHSLCISADGVRWTEIWDEGVLLGCEQLDSD*G 600
            FFGHF+DGWRHGH LCI+ +G R  E+WDEGVL+  EQLDSD G
Sbjct: 314  FFGHFKDGWRHGHFLCINVNGERCVEVWDEGVLVSREQLDSDTG 357


>ref|XP_002521879.1| 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus
            communis] gi|223538917|gb|EEF40515.1|
            1-phosphatidylinositol-4-phosphate 5-kinase, putative
            [Ricinus communis]
          Length = 760

 Score =  378 bits (971), Expect = e-102
 Identities = 203/412 (49%), Positives = 252/412 (61%), Gaps = 8/412 (1%)
 Frame = -3

Query: 1817 GLREKVSQTNGILSGLAQRFPFVLSLFGRDRPESKEPLPDHLIESPYAVEHTSSMSTEAM 1638
            G   +  Q + +LS LAQ FPFV  L  R   +S +       E     +H + +STE  
Sbjct: 377  GREIQTHQRSSLLSRLAQHFPFVSKLLRRQHQKSNDN------EGVNEPKH-AQLSTETN 429

Query: 1637 VXXXXXXXXXXXXNRYLDKLQSPSGRKYTEHERTKVEISSASDNLLPDDYNQISQD---- 1470
                            L +L +   R   E      EI+  +D    +   Q S++    
Sbjct: 430  ----------------LPELTAMESRNSAE------EIAEGTDKHSEECETQPSRNYYDL 467

Query: 1469 --EPPFDREPLIWWN-GPSFDVAEEWAKERAAISGSNTVLGNQCTYTLPVGVKPSERSME 1299
               P   REPLI WN GP + +A+EWA+ERA   G  ++L     + LPVGV+  E S E
Sbjct: 468  YKTPALQREPLISWNLGPGYQIAQEWARERA---GDTSILDTLSIFRLPVGVRSPEESKE 524

Query: 1298 TPEFTNMQSLKS-RISNDMNGKTPGSPNVPSWDALTDAGVEAVMDIYNATSTILKGKNNY 1122
               F +    +  +    +  +   S ++ SW AL+DAG   V D YN  ST+LK +N  
Sbjct: 525  GLNFLHAADFQEPKTVGVVKEQKHVSSSISSWGALSDAGFVLVRDFYNNASTMLKSRNAD 584

Query: 1121 TSKKPGLLSTRAASMLESERDSQKKWAPIIQMQYRGGSYRGRCQGGLPEGKGRLTLVDGS 942
              KK G+LS RAASMLE+ERD  KKW P+ +MQYRGG YRGRCQGGLPEGKG+L L DGS
Sbjct: 585  APKKQGVLSVRAASMLEAERDFPKKWNPVTEMQYRGGVYRGRCQGGLPEGKGQLILEDGS 644

Query: 941  IYDGVWRYGKKSGVGTFYYSNGDVFQGSWRDDLMHGKGWFYFRSGDRWFANFWKGKANGE 762
            IYDG+WRYGK+ G G FY+SNGDVFQGSWRDD+MHGKGWFYF +GDRWFANFWKGKANGE
Sbjct: 645  IYDGMWRYGKRYGPGAFYFSNGDVFQGSWRDDMMHGKGWFYFHTGDRWFANFWKGKANGE 704

Query: 761  GRFYSKNGEIFFGHFEDGWRHGHSLCISADGVRWTEIWDEGVLLGCEQLDSD 606
             RFYSK+G++FFGHF DGWRHGH LCI  DG R  EIWDEGVL+  ++L SD
Sbjct: 705  SRFYSKSGKVFFGHFRDGWRHGHFLCIDGDGERCVEIWDEGVLMSRKKLHSD 756


>dbj|BAD26753.1| ARC3 homologue [Oryza sativa Japonica Group]
          Length = 740

 Score =  326 bits (835), Expect = 1e-86
 Identities = 172/400 (43%), Positives = 238/400 (59%), Gaps = 4/400 (1%)
 Frame = -3

Query: 1799 SQTNGILSGLAQRFPFVLSLFGRDRPESKEPLPDHLIESPYAVEHTSSMSTEAMVXXXXX 1620
            S   G LSGLA  FPF+ SL G D PE K+    H     Y+   ++ +S          
Sbjct: 356  SVKEGFLSGLALHFPFISSLMGGDIPEQKQATLKH----SYSKLPSNGLSLAEQEFSRLS 411

Query: 1619 XXXXXXXNRYLDKLQSPSGRKYTEHERTKVEISSASDNLLPDDYNQISQDEP----PFDR 1452
                      L   ++   +   E  + K +  S    + PD   +IS+D        ++
Sbjct: 412  SAFTNVVVNNLFPEETDIMKSERE-SKEKTQTQSQEAKIEPD--GEISKDREREHLDSEQ 468

Query: 1451 EPLIWWNGPSFDVAEEWAKERAAISGSNTVLGNQCTYTLPVGVKPSERSMETPEFTNMQS 1272
            E   W N P   +A+ WAK R A  G  T   +    TLPVGVK       +PE      
Sbjct: 469  EHKFWSNSPGIGIAQLWAKVRMASDGG-TQNNDINIITLPVGVK-------SPEVQCGAD 520

Query: 1271 LKSRISNDMNGKTPGSPNVPSWDALTDAGVEAVMDIYNATSTILKGKNNYTSKKPGLLST 1092
             +    +  +  +  S +     + +D G+E V ++Y++  T LKG  +  S+K G ++ 
Sbjct: 521  TRPEAHSGSSSTSAASGHAAFGVSFSDIGLEKVTEMYSSAMTFLKGGMD-RSRKRGSVAN 579

Query: 1091 RAASMLESERDSQKKWAPIIQMQYRGGSYRGRCQGGLPEGKGRLTLVDGSIYDGVWRYGK 912
            RAA ML++ER+ +K W+PI+++Q+ GG YRGRCQ G+PEGKGR+T  DGS YDG+WRYGK
Sbjct: 580  RAALMLDAERELEKTWSPIVEIQFGGGIYRGRCQEGVPEGKGRITFSDGSFYDGLWRYGK 639

Query: 911  KSGVGTFYYSNGDVFQGSWRDDLMHGKGWFYFRSGDRWFANFWKGKANGEGRFYSKNGEI 732
            +SG+GT YYSNGDVF G+WRDDL HGKGW+YF SGDRWFANFWKG+ANGEGRFY+K+G +
Sbjct: 640  RSGLGTLYYSNGDVFHGTWRDDLFHGKGWYYFHSGDRWFANFWKGRANGEGRFYAKDGSV 699

Query: 731  FFGHFEDGWRHGHSLCISADGVRWTEIWDEGVLLGCEQLD 612
            FFG+F++GWRHG +L I A+G RW E+WD+GVL+G  +L+
Sbjct: 700  FFGNFQNGWRHGEALLIDANGSRWIEVWDDGVLIGQTRLE 739


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