BLASTX nr result

ID: Coptis25_contig00000847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000847
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|1...   350   4e-99
gb|AFK47682.1| unknown [Medicago truncatula]                          349   5e-98
ref|XP_002517179.1| Stem-specific protein TSJT1, putative [Ricin...   347   5e-98
ref|XP_003529615.1| PREDICTED: stem-specific protein TSJT1-like ...   343   5e-97
ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Viti...   344   7e-97

>ref|XP_002311836.1| predicted protein [Populus trichocarpa] gi|118485817|gb|ABK94756.1|
           unknown [Populus trichocarpa]
           gi|222851656|gb|EEE89203.1| predicted protein [Populus
           trichocarpa]
          Length = 236

 Score =  350 bits (899), Expect(2) = 4e-99
 Identities = 170/195 (87%), Positives = 186/195 (95%)
 Frame = +2

Query: 335 SSAVSVQVGDNVQLAYTHHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSAN 514
           SSAVSV+VGD+ Q+A+THHN+S+ LPRSFAVKDEI+CLFEG L+NLGSL+QQYGLAKSAN
Sbjct: 42  SSAVSVRVGDDSQVAFTHHNESMLLPRSFAVKDEIYCLFEGALDNLGSLRQQYGLAKSAN 101

Query: 515 EVMLVIEAYKALRDRAPYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGIT 694
           EV+LVIEAYKALRDRAPYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGIT
Sbjct: 102 EVILVIEAYKALRDRAPYPPNHVVGHLSGSFAFIVFDKSTSTLFVASDQFGKVPLYWGIT 161

Query: 695 ADGYVAFADDIELLKGACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWG 874
           ADGYVAFAD+I+LLKGACGKSLASFPQGCFFST  G LRS+ENPKNKITA+PAKEEEIWG
Sbjct: 162 ADGYVAFADNIDLLKGACGKSLASFPQGCFFSTTIGELRSFENPKNKITAVPAKEEEIWG 221

Query: 875 ATFKVEGPVVLAATE 919
           ATFKVEGP VLAATE
Sbjct: 222 ATFKVEGPAVLAATE 236



 Score = 38.9 bits (89), Expect(2) = 4e-99
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 183 MLGVFSSTIVTPPDELVAAG 242
           MLGVFSS IV+PPDELVAAG
Sbjct: 1   MLGVFSSAIVSPPDELVAAG 20


>gb|AFK47682.1| unknown [Medicago truncatula]
          Length = 236

 Score =  349 bits (895), Expect(2) = 5e-98
 Identities = 168/195 (86%), Positives = 184/195 (94%)
 Frame = +2

Query: 335 SSAVSVQVGDNVQLAYTHHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSAN 514
           +SAVS+QVG++VQLAYTHH +S + PRSFAVKDEIFCLFEG L+NLGSL+QQYGL+KSAN
Sbjct: 42  ASAVSLQVGEDVQLAYTHHEESPWQPRSFAVKDEIFCLFEGSLDNLGSLRQQYGLSKSAN 101

Query: 515 EVMLVIEAYKALRDRAPYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGIT 694
           EV+L+IEAYKALRDRAPYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGIT
Sbjct: 102 EVVLMIEAYKALRDRAPYPANHVVGHLSGSFAFIVFDKSTSTLFVASDQSGKVPLYWGIT 161

Query: 695 ADGYVAFADDIELLKGACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWG 874
           ADGYVAFADD +LLKGACGKSLASFPQGCF+STA GGLR YENPKNKITA+PA EEEIWG
Sbjct: 162 ADGYVAFADDADLLKGACGKSLASFPQGCFYSTAVGGLRCYENPKNKITAVPANEEEIWG 221

Query: 875 ATFKVEGPVVLAATE 919
           ATFKVEGP VLAATE
Sbjct: 222 ATFKVEGPAVLAATE 236



 Score = 37.0 bits (84), Expect(2) = 5e-98
 Identities = 15/20 (75%), Positives = 20/20 (100%)
 Frame = +3

Query: 183 MLGVFSSTIVTPPDELVAAG 242
           MLG+FSS++V+PP+ELVAAG
Sbjct: 1   MLGIFSSSVVSPPEELVAAG 20


>ref|XP_002517179.1| Stem-specific protein TSJT1, putative [Ricinus communis]
           gi|223543814|gb|EEF45342.1| Stem-specific protein TSJT1,
           putative [Ricinus communis]
          Length = 236

 Score =  347 bits (890), Expect(2) = 5e-98
 Identities = 167/194 (86%), Positives = 183/194 (94%)
 Frame = +2

Query: 338 SAVSVQVGDNVQLAYTHHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANE 517
           SAVS+Q+GDN QLAYTHH++S+  PRSFAVKD+IFCLFEG L+NLGSLKQQYGLAKSANE
Sbjct: 43  SAVSLQIGDNAQLAYTHHSESLLQPRSFAVKDDIFCLFEGALDNLGSLKQQYGLAKSANE 102

Query: 518 VMLVIEAYKALRDRAPYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITA 697
           V+LVIEAYKALRDRAPYP NHVVGHLSGSFAF+VFD STSTLFVASDQ GKVPL+WGITA
Sbjct: 103 VVLVIEAYKALRDRAPYPPNHVVGHLSGSFAFIVFDNSTSTLFVASDQFGKVPLYWGITA 162

Query: 698 DGYVAFADDIELLKGACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGA 877
           DGYVAFAD+IELLKGACGKSLASFPQGCF+STA G LRS+ENPK+K+TA+PAKEEEIWGA
Sbjct: 163 DGYVAFADNIELLKGACGKSLASFPQGCFYSTAVGELRSFENPKHKVTAVPAKEEEIWGA 222

Query: 878 TFKVEGPVVLAATE 919
           TFKVEGP VLAA E
Sbjct: 223 TFKVEGPAVLAARE 236



 Score = 38.9 bits (89), Expect(2) = 5e-98
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 183 MLGVFSSTIVTPPDELVAAG 242
           MLGVFSS IV+PPDELVAAG
Sbjct: 1   MLGVFSSAIVSPPDELVAAG 20


>ref|XP_003529615.1| PREDICTED: stem-specific protein TSJT1-like [Glycine max]
          Length = 235

 Score =  343 bits (880), Expect(2) = 5e-97
 Identities = 165/191 (86%), Positives = 178/191 (93%)
 Frame = +2

Query: 338 SAVSVQVGDNVQLAYTHHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANE 517
           SAVSV+VG++VQLAYTHHN+S F PRSFAVKDE+FCLFEG L+NLG+L+QQYGLAKS NE
Sbjct: 43  SAVSVEVGEHVQLAYTHHNESPFQPRSFAVKDEVFCLFEGALDNLGNLRQQYGLAKSVNE 102

Query: 518 VMLVIEAYKALRDRAPYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITA 697
           V+LVIEAYKALRDRAPYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL+WGITA
Sbjct: 103 VLLVIEAYKALRDRAPYPANHVVGHLSGSFAFIVFDKSTSTLFVASDQYGKVPLYWGITA 162

Query: 698 DGYVAFADDIELLKGACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGA 877
           DGYVAFADD ELL GACGKSLASFPQGCF+STA GGL  YENPKNKITA+PA EEEIWGA
Sbjct: 163 DGYVAFADDAELLNGACGKSLASFPQGCFYSTAVGGLMCYENPKNKITAVPANEEEIWGA 222

Query: 878 TFKVEGPVVLA 910
           TFKVEGPVV A
Sbjct: 223 TFKVEGPVVAA 233



 Score = 39.3 bits (90), Expect(2) = 5e-97
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +3

Query: 183 MLGVFSSTIVTPPDELVAAG 242
           MLGVFSS+IV+PPDELVAAG
Sbjct: 1   MLGVFSSSIVSPPDELVAAG 20


>ref|XP_002280658.1| PREDICTED: stem-specific protein TSJT1 [Vitis vinifera]
           gi|297736991|emb|CBI26192.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  344 bits (882), Expect(2) = 7e-97
 Identities = 170/194 (87%), Positives = 180/194 (92%)
 Frame = +2

Query: 338 SAVSVQVGDNVQLAYTHHNQSIFLPRSFAVKDEIFCLFEGVLENLGSLKQQYGLAKSANE 517
           SAVSV VGD+VQLAYTHHN+S  LPRSFAVKDEIF LFEG L+NLGSL+QQYGLAKSANE
Sbjct: 43  SAVSVHVGDHVQLAYTHHNESPLLPRSFAVKDEIFSLFEGALDNLGSLRQQYGLAKSANE 102

Query: 518 VMLVIEAYKALRDRAPYPVNHVVGHLSGSFAFVVFDKSTSTLFVASDQDGKVPLFWGITA 697
           V+LVIEAYKALRDRAPYP NHVVGHLSGSFAF+VFDKSTSTLFVASDQ GKVPL WGITA
Sbjct: 103 VVLVIEAYKALRDRAPYPPNHVVGHLSGSFAFIVFDKSTSTLFVASDQFGKVPLSWGITA 162

Query: 698 DGYVAFADDIELLKGACGKSLASFPQGCFFSTAAGGLRSYENPKNKITAIPAKEEEIWGA 877
           DGYVAFADD ELLKGACGKSLASFPQGCFFSTA G LRS+ENPKNKITA+PA +EEIWGA
Sbjct: 163 DGYVAFADDAELLKGACGKSLASFPQGCFFSTAVGELRSFENPKNKITAVPAPDEEIWGA 222

Query: 878 TFKVEGPVVLAATE 919
           TFKVEGP V AAT+
Sbjct: 223 TFKVEGPAVFAATK 236



 Score = 38.1 bits (87), Expect(2) = 7e-97
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 183 MLGVFSSTIVTPPDELVAAG 242
           MLGVFSS+I++PPDELVAAG
Sbjct: 1   MLGVFSSSIMSPPDELVAAG 20


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