BLASTX nr result

ID: Coptis25_contig00000845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000845
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isof...   213   7e-53
emb|CBI19831.3| unnamed protein product [Vitis vinifera]              213   7e-53
ref|XP_002510508.1| Auxin response factor, putative [Ricinus com...   207   3e-51
ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cuc...   204   2e-50
ref|XP_002300718.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49

>ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  213 bits (541), Expect = 7e-53
 Identities = 105/134 (78%), Positives = 114/134 (85%)
 Frame = -1

Query: 403 MSTLEEKSKAXXXXXXXXGAPILAEEMKILKELQDQSGTRKSINSELWHACAGPLVSLPQ 224
           MS++EE  KA            L EEMK+LKE+QDQSG RK+INSELWHACAGPLVSLPQ
Sbjct: 1   MSSVEENIKAGGLVSGTQTT--LIEEMKLLKEMQDQSGPRKAINSELWHACAGPLVSLPQ 58

Query: 223 VGSLVYYFPQGHSEQVAVSTKRIAASHIPNYPNLPSQLMCQVHNVTLHAEKDTDEIYAQM 44
           VGSLVYYFPQGHSEQVAVSTKR A S IPNYPNLPSQLMCQVHNVTLHA+KDTDEIYAQM
Sbjct: 59  VGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQM 118

Query: 43  TLQPVNSENDVFPV 2
           +LQPVNSE D+FP+
Sbjct: 119 SLQPVNSEKDIFPI 132


>emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  213 bits (541), Expect = 7e-53
 Identities = 105/134 (78%), Positives = 114/134 (85%)
 Frame = -1

Query: 403 MSTLEEKSKAXXXXXXXXGAPILAEEMKILKELQDQSGTRKSINSELWHACAGPLVSLPQ 224
           MS++EE  KA            L EEMK+LKE+QDQSG RK+INSELWHACAGPLVSLPQ
Sbjct: 2   MSSVEENIKAGGLVSGTQTT--LIEEMKLLKEMQDQSGPRKAINSELWHACAGPLVSLPQ 59

Query: 223 VGSLVYYFPQGHSEQVAVSTKRIAASHIPNYPNLPSQLMCQVHNVTLHAEKDTDEIYAQM 44
           VGSLVYYFPQGHSEQVAVSTKR A S IPNYPNLPSQLMCQVHNVTLHA+KDTDEIYAQM
Sbjct: 60  VGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQM 119

Query: 43  TLQPVNSENDVFPV 2
           +LQPVNSE D+FP+
Sbjct: 120 SLQPVNSEKDIFPI 133


>ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
           gi|223551209|gb|EEF52695.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 950

 Score =  207 bits (527), Expect = 3e-51
 Identities = 102/134 (76%), Positives = 115/134 (85%)
 Frame = -1

Query: 403 MSTLEEKSKAXXXXXXXXGAPILAEEMKILKELQDQSGTRKSINSELWHACAGPLVSLPQ 224
           M+++EEK KA           +L EEMK+LKE+QD SGTRK+INSELW+ACAGPLVSLPQ
Sbjct: 1   MASVEEKIKAGSFVSSGAQTNLL-EEMKLLKEIQDHSGTRKTINSELWYACAGPLVSLPQ 59

Query: 223 VGSLVYYFPQGHSEQVAVSTKRIAASHIPNYPNLPSQLMCQVHNVTLHAEKDTDEIYAQM 44
           VGSLVYYFPQGHSEQVAVSTKR A S IPNYPNL SQL+CQVHNVTLHA++DTDEIYAQM
Sbjct: 60  VGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQVHNVTLHADRDTDEIYAQM 119

Query: 43  TLQPVNSENDVFPV 2
           +LQPVNSE DVFP+
Sbjct: 120 SLQPVNSEKDVFPI 133


>ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
           gi|449476870|ref|XP_004154860.1| PREDICTED: auxin
           response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  204 bits (519), Expect = 2e-50
 Identities = 101/134 (75%), Positives = 110/134 (82%)
 Frame = -1

Query: 403 MSTLEEKSKAXXXXXXXXGAPILAEEMKILKELQDQSGTRKSINSELWHACAGPLVSLPQ 224
           M ++EEK K             L +EMK+LKE+QDQSG RK+INSELWHACAGPLVSLP 
Sbjct: 1   MGSVEEKLKTSGGLINNAPQTNLLDEMKLLKEMQDQSGARKAINSELWHACAGPLVSLPH 60

Query: 223 VGSLVYYFPQGHSEQVAVSTKRIAASHIPNYPNLPSQLMCQVHNVTLHAEKDTDEIYAQM 44
           VGSLVYYFPQGHSEQVAVSTKR A S IPNYPNLPSQLMCQV NVTLHA+KD+DEIYAQM
Sbjct: 61  VGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQNVTLHADKDSDEIYAQM 120

Query: 43  TLQPVNSENDVFPV 2
           +LQPVNSE DVF V
Sbjct: 121 SLQPVNSEKDVFLV 134


>ref|XP_002300718.1| predicted protein [Populus trichocarpa] gi|222842444|gb|EEE79991.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  202 bits (513), Expect = 1e-49
 Identities = 96/108 (88%), Positives = 103/108 (95%)
 Frame = -1

Query: 325 MKILKELQDQSGTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRIAAS 146
           MK+LKE QDQSGTRK+INSELW+ACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKR A S
Sbjct: 1   MKLLKEFQDQSGTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATS 60

Query: 145 HIPNYPNLPSQLMCQVHNVTLHAEKDTDEIYAQMTLQPVNSENDVFPV 2
            IPNYPNLPSQL+CQVHNVTLHA+KDTDEI+AQM+LQPVNSE DVFPV
Sbjct: 61  QIPNYPNLPSQLLCQVHNVTLHADKDTDEIHAQMSLQPVNSEKDVFPV 108


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