BLASTX nr result
ID: Coptis25_contig00000827
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000827
(1687 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA do... 533 e-149
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm... 513 e-143
emb|CBI21475.3| unnamed protein product [Vitis vinifera] 502 e-139
ref|XP_003537505.1| PREDICTED: uncharacterized protein LOC100815... 491 e-136
ref|XP_003532844.1| PREDICTED: uncharacterized protein LOC100795... 485 e-134
>ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
2-like [Vitis vinifera]
Length = 524
Score = 533 bits (1372), Expect = e-149
Identities = 295/529 (55%), Positives = 361/529 (68%), Gaps = 19/529 (3%)
Frame = -2
Query: 1686 SEQILADKLTKLNSTQQCIETLSHWCIFHQSKAEQVVSTWDKQFHSSEMAHKIPYLYLAN 1507
SEQILADKL+KLNSTQQCIETLSHWCIFH+SKAE VV+TWDKQFHSSEMA K+P LYLAN
Sbjct: 6 SEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHSSEMAQKVPLLYLAN 65
Query: 1506 DILQNSKRKGNEFVTEFWKVLPAAVKDIFDNGDDHGKNVVSRLVNIWEERRVFGSRAQGL 1327
DILQNSKRKGNEFV+EFWKVLPAA+K + + GDDHGKNVVSRLV+IWEERRVFGSRAQ L
Sbjct: 66 DILQNSKRKGNEFVSEFWKVLPAALKAVVEKGDDHGKNVVSRLVHIWEERRVFGSRAQSL 125
Query: 1326 KDLMLGKELLPALELSKKRSRAVRILKRDSRSVRIKLSTGGTTEKIVSAFHAVLSEHSDE 1147
D+MLG+EL P LE SKKRSR+V+I++RD RS+R KLS GG+ EKIVSAFH VLS+ S E
Sbjct: 126 NDVMLGEELPPPLEFSKKRSRSVKIVRRDMRSIRTKLSIGGSAEKIVSAFHVVLSDQSTE 185
Query: 1146 DVLMHKCKSSVHRVRKMEKEVEVACRTEEDIKRTTXXXXXXXXXXXLKQCIEKLKSVEAT 967
D M+KCKS+VH VRKME++V+ AC +D KR T LKQCIEKLK VEA
Sbjct: 186 DAEMNKCKSAVHHVRKMERDVDTACLNAKDPKRKTLAKELEDEEDVLKQCIEKLKLVEAN 245
Query: 966 REVLVTQLKEALHEQESELESVRTQIQVAQAQADESCHLRKRLSNEIDVLVPNSNSSATA 787
RE LV+QLKEALHEQESELE++RTQ+QVA AQA+E+ ++RKRL++E + S+ A
Sbjct: 246 REALVSQLKEALHEQESELENIRTQMQVAHAQAEEASNMRKRLNDENFTVAKPSH----A 301
Query: 786 TTPQVDSNGNSGETHKRT----AAAIADKLAASTSSQQIMSAVLSSFVKQEAKKSGLTSA 619
T+P +++N G+ KRT AA +ADKL AS+SSQ IM++VLS+F +EAK +GLT
Sbjct: 302 TSP-LEANAKVGQASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKT 360
Query: 618 TTPPNSFTVASTNPSGDMRLTHERPMTVADSSAFIAAQPLAIATSNPYQTVLIHQSPMHG 439
+T NSFT +N E M V+D + F++ Q L + PYQ+V+I M
Sbjct: 361 STVSNSFTPMPSNSK------PENSMPVSDPNVFMSTQTLTAPPNQPYQSVIIAPPTMQS 414
Query: 438 HPSTPQPQYHLVTNTPSQQYLQASGGIVTGLSYGYSNMVXXXXXXXXXXXXXSHMN---- 271
T Q QYH++ N PSQQYLQ SGGI+ YGY ++ +N
Sbjct: 415 QTPTSQTQYHMLPNPPSQQYLQPSGGIMN--PYGYGSIPPLPPGPPPPPSTLHMVNPMAP 472
Query: 270 -----------MSSQFSXXXXXXXXXXXXXXPSFRPLQPPGMLYYTHPH 157
+ + PSFRPLQ PGM+YY PH
Sbjct: 473 LPQQQSIPLVQQPALLTRHQPMPLTQQPPAPPSFRPLQLPGMVYYGLPH 521
>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
gi|223531583|gb|EEF33412.1| conserved hypothetical
protein [Ricinus communis]
Length = 514
Score = 513 bits (1321), Expect = e-143
Identities = 284/531 (53%), Positives = 360/531 (67%), Gaps = 22/531 (4%)
Frame = -2
Query: 1686 SEQILADKLTKLNSTQQCIETLSHWCIFHQSKAEQVVSTWDKQFHSSEMAHKIPYLYLAN 1507
SEQILADKL+KLNSTQQCIETLSHWCIFH+SKAEQVV TWDKQFH S++A K+P LYLAN
Sbjct: 6 SEQILADKLSKLNSTQQCIETLSHWCIFHRSKAEQVVETWDKQFHGSQIAQKVPLLYLAN 65
Query: 1506 DILQNSKRKGNEFVTEFWKVLPAAVKDIFDNGDDHGKNVVSRLVNIWEERRVFGSRAQGL 1327
DILQNSKRKGNEFV+EFWKVLPAA+KD+ + GDD GK+VV+RLVNIWEERRVFGS A+ L
Sbjct: 66 DILQNSKRKGNEFVSEFWKVLPAALKDLSEKGDDRGKSVVTRLVNIWEERRVFGSSARSL 125
Query: 1326 KDLMLGKELLPALELSKKRSRAVRILKRDSRSVRIKLSTGGTTEKIVSAFHAVLSEHSDE 1147
KD+MLGK+ P LE SKKRSR+V+I+KRDSRS++ KL+ GG EKIVSAFH V +EH E
Sbjct: 126 KDVMLGKDAPPPLEFSKKRSRSVKIMKRDSRSIKTKLTIGGAAEKIVSAFHLVGNEHQTE 185
Query: 1146 DVLMHKCKSSVHRVRKMEKEVEVACRTEEDIKRTTXXXXXXXXXXXLKQCIEKLKSVEAT 967
+ M+ CKS+V+R+RKMEKEV++AC +D KR LKQ IEKLKSVEA+
Sbjct: 186 EAEMNNCKSAVNRIRKMEKEVDIACSNGKDPKRNMLAKEIEEEENLLKQSIEKLKSVEAS 245
Query: 966 REVLVTQLKEALHEQESELESVRTQIQVAQAQADESCHLRKRLSNEIDVLVPNSNSSATA 787
R LV+QLKEALHEQE+ELE++RTQ+QV QAQADE+ ++RKRL++E VP ++T+
Sbjct: 246 RVALVSQLKEALHEQEAELENIRTQMQVGQAQADEASNMRKRLNDE--DYVPR---ASTS 300
Query: 786 TTPQVDSNGNSGETHKRTAAAI----ADKLAASTSSQQIMSAVLSSFVKQEAKKSGLTSA 619
TT VD+N +G+T KR+AAAI ADKLAAS+SSQ IM +VLS+F +EAK +GLT
Sbjct: 301 TTQAVDTNA-TGKTTKRSAAAIAAEVADKLAASSSSQLIMHSVLSTFAAEEAKSAGLTKN 359
Query: 618 TTPPNSFTVASTNPSGDMRLTHERPMTVADSSAFIAAQPLAIATSNPYQTVLIHQSPMHG 439
+ P E+ + ++D + F+ AQ L +++ YQ+V++ M
Sbjct: 360 SKP-------------------EKSLPISDPNVFMPAQSLTAPSNHSYQSVMLAPPTMQN 400
Query: 438 HPSTPQPQYHLVTNTPSQQYLQASGGIVTGLSYGYSNMVXXXXXXXXXXXXXSHMNMSSQ 259
+ Q QYH++ N PSQQY+Q SGGI+T YG + + + ++ Q
Sbjct: 401 QAPSSQAQYHMLPNPPSQQYMQPSGGIITPYGYGSISPLPPGPLPPPPYVVSPMVPLNQQ 460
Query: 258 FS------------------XXXXXXXXXXXXXXPSFRPLQPPGMLYYTHP 160
S PSFRPLQPPGM+YY HP
Sbjct: 461 PSQITQQQPMPLAQQQAPIPQQQPMPLTQQAPGPPSFRPLQPPGMVYYGHP 511
>emb|CBI21475.3| unnamed protein product [Vitis vinifera]
Length = 473
Score = 502 bits (1292), Expect = e-139
Identities = 284/515 (55%), Positives = 343/515 (66%), Gaps = 5/515 (0%)
Frame = -2
Query: 1686 SEQILADKLTKLNSTQQCIETLSHWCIFHQSKAEQVVSTWDKQFHSSEMAHKIPYLYLAN 1507
SEQILADKL+KLNSTQQCIETLSHWCIFH+SKAE VV+TWDKQFHSSEMA K+P LYLAN
Sbjct: 6 SEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHSSEMAQKVPLLYLAN 65
Query: 1506 DILQNSKRKGNEFVTEFWKVLPAAVKDIFDNGDDHGKNVVSRLVNIWEERRVFGSRAQGL 1327
DILQNSKRKGNEFV+EFWKVLPAA+K + + GDDHGKNVVSRLV+IWEERRVFGSRAQ L
Sbjct: 66 DILQNSKRKGNEFVSEFWKVLPAALKAVVEKGDDHGKNVVSRLVHIWEERRVFGSRAQSL 125
Query: 1326 KDLMLGKELLPALELSKKRSRAVRILKRDSRSVRIKLSTGGTTEKIVSAFHAVLSEHSDE 1147
D+MLG+EL P LE SKKRSR+V+I++RD RS+R KLS GG+ EKIVSAFH VLS+ S E
Sbjct: 126 NDVMLGEELPPPLEFSKKRSRSVKIVRRDMRSIRTKLSIGGSAEKIVSAFHVVLSDQSTE 185
Query: 1146 DVLMHKCKSSVHRVRKMEKEVEVACRTEEDIKRTTXXXXXXXXXXXLKQCIEKLKSVEAT 967
D M+KCKS+VH VRKME++V+ AC +D KR T LKQCIEKLK VEA
Sbjct: 186 DAEMNKCKSAVHHVRKMERDVDTACLNAKDPKRKTLAKELEDEEDVLKQCIEKLKLVEAN 245
Query: 966 REVLVTQLKEALHEQESELESVRTQIQVAQAQADESCHLRKRLSNEIDVLVPNSNSSATA 787
RE LV+QLKEALHEQESELE++RTQ+QVA AQA+E+ ++RKRL++E + S+ A
Sbjct: 246 REALVSQLKEALHEQESELENIRTQMQVAHAQAEEASNMRKRLNDENFTVAKPSH----A 301
Query: 786 TTPQVDSNGNSGETHKRT----AAAIADKLAASTSSQQIMSAVLSSFVKQEAKKSGLTSA 619
T+P +++N G+ KRT AA +ADKL AS+SSQ IM++VLS+F +EAK +GLT
Sbjct: 302 TSP-LEANAKVGQASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKT 360
Query: 618 TTPPNSFTVASTNPSGDMRLTHERPMTVADSSAFIAAQPLAIATSNPYQTVLIHQSPMHG 439
+T NSFT +N P +
Sbjct: 361 STVSNSFTPMPSN-----------------------------------------SKPENS 379
Query: 438 HPS-TPQPQYHLVTNTPSQQYLQASGGIVTGLSYGYSNMVXXXXXXXXXXXXXSHMNMSS 262
P+ T Q QYH++ N PSQQYLQ SGGI+ YG + HM ++
Sbjct: 380 MPTPTSQTQYHMLPNPPSQQYLQPSGGIMNPYGYG---SIPPLPPGPPPPPSTLHM-VNP 435
Query: 261 QFSXXXXXXXXXXXXXXPSFRPLQPPGMLYYTHPH 157
PSFRPLQ PGM+YY PH
Sbjct: 436 MAPLPQQQSIPLQPPAPPSFRPLQLPGMVYYGLPH 470
>ref|XP_003537505.1| PREDICTED: uncharacterized protein LOC100815709 [Glycine max]
Length = 552
Score = 491 bits (1264), Expect = e-136
Identities = 280/528 (53%), Positives = 348/528 (65%), Gaps = 5/528 (0%)
Frame = -2
Query: 1686 SEQILADKLTKLNSTQQCIETLSHWCIFHQSKAEQVVSTWDKQFHSSEMAHKIPYLYLAN 1507
SEQILADKL+KLN+TQQCIETLSHWCIFH+SKAE V+TW KQF SEM +IP LYLAN
Sbjct: 6 SEQILADKLSKLNNTQQCIETLSHWCIFHRSKAELFVATWKKQFDKSEMIQRIPLLYLAN 65
Query: 1506 DILQNSKRKGNEFVTEFWKVLPAAVKDIFDNGDDHGKNVVSRLVNIWEERRVFGSRAQGL 1327
DILQNSK KGNEFVTEFWKVLPAA+KD+ GDDHG VVSRL+ IWE+RRVFGSRA+ L
Sbjct: 66 DILQNSKHKGNEFVTEFWKVLPAALKDVIKKGDDHGTRVVSRLIEIWEQRRVFGSRARNL 125
Query: 1326 KDLMLGKELLPALELSKKRSRAVRILKRDSRSVRIKLSTGGTTEKIVSAFHAVLSEHSDE 1147
KDLMLG++ P LE KKRSR+VRI+KRDS S++ KLS GGT EKIVSAFH VLSE S E
Sbjct: 126 KDLMLGEDAPPPLEFGKKRSRSVRIVKRDSHSIKSKLSIGGTAEKIVSAFHLVLSEQSVE 185
Query: 1146 DVLMHKCKSSVHRVRKMEKEVEVACRTEEDIKRTTXXXXXXXXXXXLKQCIEKLKSVEAT 967
D + KCKSSV RVRKMEK+V+ AC +D KR T LK+C+EKLK VEA+
Sbjct: 186 DAEISKCKSSVQRVRKMEKDVDTACSVAKDPKRKTLAKELEEEENILKRCVEKLKLVEAS 245
Query: 966 REVLVTQLKEALHEQESELESVRTQIQVAQAQADESCHLRKRLSNEIDVLVPNSNSSATA 787
R LV+QLKEALHEQESELE+VRTQ+QVAQAQ +E+C++R+ L NE + SA A
Sbjct: 246 RVALVSQLKEALHEQESELENVRTQMQVAQAQIEEACNMRRILDNEDFSQKVSVAKSAAA 305
Query: 786 TTPQVDSNGNSGETHKRTAAAIADKLAASTSSQQIMSAVLSSFVKQEAKKSGLTSATTPP 607
AA +ADKLAAS+SSQ IM++VLS+F +EAK +GLTS +T
Sbjct: 306 -----------------IAAEVADKLAASSSSQLIMTSVLSTFAAEEAKNAGLTSESTS- 347
Query: 606 NSFTVASTNPSGDMRLTHERPMTVADSSAFIAAQPLAIATSNPYQTVLIHQ-SPMHGHPS 430
HE PMT +D F + Q L A ++ Y +VL+ Q P+
Sbjct: 348 ----------------KHEIPMTSSDPHMFRSPQQLIAAPNHSYPSVLVAQPPPLQNAAP 391
Query: 429 TPQPQYHLVTNTPSQQYLQASGGIVTGLSYGYSNMVXXXXXXXXXXXXXSHM---NMSSQ 259
+ Q Q+H+++N PSQQ++Q++GGI+T YGY ++ + + + + Q
Sbjct: 392 SSQGQFHMLSNPPSQQFVQSTGGIIT--PYGYGSIPPLPPAPQLPTHVGAMVPLTHQTLQ 449
Query: 258 FSXXXXXXXXXXXXXXPSFRPLQPPGMLYYT-HPHIQ*AYLSTKLDNL 118
+ P+FRPLQPPGM+YYT H H A L +L N+
Sbjct: 450 ITPHQQIPITQQAPAPPTFRPLQPPGMVYYTNHQHSIHATLGRELANV 497
>ref|XP_003532844.1| PREDICTED: uncharacterized protein LOC100795054 [Glycine max]
Length = 509
Score = 485 bits (1248), Expect = e-134
Identities = 269/526 (51%), Positives = 350/526 (66%), Gaps = 16/526 (3%)
Frame = -2
Query: 1686 SEQILADKLTKLNSTQQCIETLSHWCIFHQSKAEQVVSTWDKQFHSSEMAHKIPYLYLAN 1507
SEQILADKL+KLNSTQQCIETLSHWCIFH+SKAE VV TW+KQFH+SE ++P LYLAN
Sbjct: 6 SEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVGTWNKQFHNSEKVQRVPLLYLAN 65
Query: 1506 DILQNSKRKGNEFVTEFWKVLPAAVKDIFDNGDDHGKNVVSRLVNIWEERRVFGSRAQGL 1327
DILQNS+RKGNEFVTEFWKVLP+A+KD+ + GDD V RLV+IWEERRVFGS+A+ L
Sbjct: 66 DILQNSRRKGNEFVTEFWKVLPSALKDVLEKGDDQENRAVFRLVDIWEERRVFGSQAKSL 125
Query: 1326 KDLMLGKELLPALELSKKRSRAVRILKRDSRSVRIKLSTGGTTEKIVSAFHAVLSEHSDE 1147
K+++LG+E P LE +KKRSR+VRI+K+DSRS++ KLS GGT EKIVSAFH VL+EHS+E
Sbjct: 126 KNVILGEEAPPQLEFNKKRSRSVRIVKKDSRSIKTKLSIGGTAEKIVSAFHTVLNEHSNE 185
Query: 1146 DVLMHKCKSSVHRVRKMEKEVEVACRTEEDIKRTTXXXXXXXXXXXLKQCIEKLKSVEAT 967
D M +CKS+VHRVRKMEK V++AC +D KR T LK+CIE LK VEA+
Sbjct: 186 DAEMSRCKSAVHRVRKMEKNVDIACAVVKDPKRKTLSKELVEEENILKECIENLKLVEAS 245
Query: 966 REVLVTQLKEALHEQESELESVRTQIQVAQAQADESCHLRKRLSNEIDVLVPNSNSSATA 787
R LV LKEALHEQESELE+VRTQIQVAQAQ +E+ ++RKRL +E +S ++ +
Sbjct: 246 RTALVIHLKEALHEQESELENVRTQIQVAQAQVEEASYMRKRLDDE-----DSSYKASIS 300
Query: 786 TTPQVDSNGNSGETHKRTAAAI----ADKLAASTSSQQIMSAVLSSFVKQEAKKSGLTSA 619
TT D N S K++AAAI ADKL ASTSSQ IM++VLS+F +EAK + LTS
Sbjct: 301 TTSLTDVNTKSEAATKKSAAAIAAEVADKLTASTSSQLIMTSVLSTFAAEEAKSACLTSE 360
Query: 618 TTPPNSFTVASTNPSGDMRLTHERPMTVADSSAFIAAQPLAIATSNPYQTVLIHQSPMHG 439
+ + P E+ + ++D + F+++Q L ++ Y +VL+ Q +
Sbjct: 361 ---------SMSKP--------EKSIPISDPNVFVSSQQLIATPNHSYPSVLVPQPTLQN 403
Query: 438 HPSTPQPQYHLVTNTPSQQYLQASGGIVTGLSYGYSNMVXXXXXXXXXXXXXSHMNMSSQ 259
+ Q QY ++ N+ SQ YLQ++GG+++ SYGY ++ + ++ Q
Sbjct: 404 PAAASQGQYQMLCNSSSQHYLQSTGGVIS--SYGYGSITPLPPGPLPPHMVGPVVPLTHQ 461
Query: 258 -----------FSXXXXXXXXXXXXXXPSFRPLQPPGMLYY-THPH 157
+ PSFRPLQPPGM+YY H H
Sbjct: 462 AMQITQQQPTPIAQHQPIKMTQQAPAPPSFRPLQPPGMVYYGNHQH 507