BLASTX nr result
ID: Coptis25_contig00000826
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000826 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 224 4e-57 emb|CBI30217.3| unnamed protein product [Vitis vinifera] 221 4e-56 gb|AFK40850.1| unknown [Medicago truncatula] 221 5e-56 ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus... 221 6e-56 gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK... 219 1e-55 >ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis vinifera] Length = 198 Score = 224 bits (572), Expect = 4e-57 Identities = 112/117 (95%), Positives = 115/117 (98%) Frame = -2 Query: 414 AAMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYR 235 AAMVLKTELCRFSGAKIYPG+GIRFVR+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYR Sbjct: 32 AAMVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYR 91 Query: 234 KQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64 KQHKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI Sbjct: 92 KQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 148 >emb|CBI30217.3| unnamed protein product [Vitis vinifera] Length = 165 Score = 221 bits (564), Expect = 4e-56 Identities = 110/115 (95%), Positives = 113/115 (98%) Frame = -2 Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229 MVLKTELCRFSGAKIYPG+GIRFVR+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60 Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64 HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 115 >gb|AFK40850.1| unknown [Medicago truncatula] Length = 163 Score = 221 bits (563), Expect = 5e-56 Identities = 109/115 (94%), Positives = 113/115 (98%) Frame = -2 Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229 MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHNKLKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60 Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64 HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115 >ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis] gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24, putative [Ricinus communis] Length = 186 Score = 221 bits (562), Expect = 6e-56 Identities = 109/117 (93%), Positives = 113/117 (96%) Frame = -2 Query: 414 AAMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYR 235 AAMVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYR Sbjct: 21 AAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYR 80 Query: 234 KQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64 KQHKKDIA EAVKKRRR TKKPYSRSIVGATLEVIQKRRTEK EVRDAAREAALREI Sbjct: 81 KQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 137 >gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK40088.1| unknown [Medicago truncatula] Length = 153 Score = 219 bits (559), Expect = 1e-55 Identities = 108/115 (93%), Positives = 112/115 (97%) Frame = -2 Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229 MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHNKLKPSKLTWTAMYRKQ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60 Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64 HKKDIA EAVKKRRRATKKPYSRSIVG TLEVIQK+RTEK EVRDAAREAALREI Sbjct: 61 HKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALREI 115