BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000826
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   224   4e-57
emb|CBI30217.3| unnamed protein product [Vitis vinifera]              221   4e-56
gb|AFK40850.1| unknown [Medicago truncatula]                          221   5e-56
ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus...   221   6e-56
gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK...   219   1e-55

>ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis
           vinifera]
          Length = 198

 Score =  224 bits (572), Expect = 4e-57
 Identities = 112/117 (95%), Positives = 115/117 (98%)
 Frame = -2

Query: 414 AAMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYR 235
           AAMVLKTELCRFSGAKIYPG+GIRFVR+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYR
Sbjct: 32  AAMVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYR 91

Query: 234 KQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64
           KQHKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI
Sbjct: 92  KQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 148


>emb|CBI30217.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  221 bits (564), Expect = 4e-56
 Identities = 110/115 (95%), Positives = 113/115 (98%)
 Frame = -2

Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229
           MVLKTELCRFSGAKIYPG+GIRFVR+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFVRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64
           HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 115


>gb|AFK40850.1| unknown [Medicago truncatula]
          Length = 163

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/115 (94%), Positives = 113/115 (98%)
 Frame = -2

Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHNKLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64
           HKKDIA EAVKKRRRATKKPYSRSIVGATLEVIQK+RTEK EVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115


>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
           gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
           putative [Ricinus communis]
          Length = 186

 Score =  221 bits (562), Expect = 6e-56
 Identities = 109/117 (93%), Positives = 113/117 (96%)
 Frame = -2

Query: 414 AAMVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYR 235
           AAMVLKTELCRFSGAKIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKLTWTAMYR
Sbjct: 21  AAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYR 80

Query: 234 KQHKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64
           KQHKKDIA EAVKKRRR TKKPYSRSIVGATLEVIQKRRTEK EVRDAAREAALREI
Sbjct: 81  KQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 137


>gb|ACJ83918.1| unknown [Medicago truncatula] gi|388504044|gb|AFK40088.1| unknown
           [Medicago truncatula]
          Length = 153

 Score =  219 bits (559), Expect = 1e-55
 Identities = 108/115 (93%), Positives = 112/115 (97%)
 Frame = -2

Query: 408 MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFLNSKCKRYFHNKLKPSKLTWTAMYRKQ 229
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLF+NSKCKRYFHNKLKPSKLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 228 HKKDIAAEAVKKRRRATKKPYSRSIVGATLEVIQKRRTEKAEVRDAAREAALREI 64
           HKKDIA EAVKKRRRATKKPYSRSIVG TLEVIQK+RTEK EVRDAAREAALREI
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALREI 115