BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000821
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34367.3| unnamed protein product [Vitis vinifera]              243   4e-62
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   243   4e-62
gb|ABR16132.1| unknown [Picea sitchensis]                             238   8e-61
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   229   4e-58
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...   228   1e-57

>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score =  243 bits (619), Expect = 4e-62
 Identities = 121/141 (85%), Positives = 126/141 (89%)
 Frame = -3

Query: 783  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDTGADLGYSRHEEQMAL 604
            EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPD+GADL Y R +EQ+AL
Sbjct: 709  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLAL 768

Query: 603  LNKVLSAGDDMVGLEQLQEDADDIALLKARRSFGSMSAMSGAKGMVYMEYNTGRGGRPGQ 424
            L KVLSAGDD VGLEQL EDADDIAL KARRS GSMSAMSGA GMVYMEYNTGR    GQ
Sbjct: 769  LGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRNKHGGQ 828

Query: 423  GQLKSKPKDPSKRHSLFKKRF 361
            GQ+K KPKDPSKRH LFK+RF
Sbjct: 829  GQIKGKPKDPSKRHHLFKRRF 849


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  243 bits (619), Expect = 4e-62
 Identities = 121/141 (85%), Positives = 126/141 (89%)
 Frame = -3

Query: 783  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDTGADLGYSRHEEQMAL 604
            EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPD+GADL Y R +EQ+AL
Sbjct: 630  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLAL 689

Query: 603  LNKVLSAGDDMVGLEQLQEDADDIALLKARRSFGSMSAMSGAKGMVYMEYNTGRGGRPGQ 424
            L KVLSAGDD VGLEQL EDADDIAL KARRS GSMSAMSGA GMVYMEYNTGR    GQ
Sbjct: 690  LGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRNKHGGQ 749

Query: 423  GQLKSKPKDPSKRHSLFKKRF 361
            GQ+K KPKDPSKRH LFK+RF
Sbjct: 750  GQIKGKPKDPSKRHHLFKRRF 770


>gb|ABR16132.1| unknown [Picea sitchensis]
          Length = 772

 Score =  238 bits (608), Expect = 8e-61
 Identities = 117/141 (82%), Positives = 128/141 (90%)
 Frame = -3

Query: 783  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDTGADLGYSRHEEQMAL 604
            EYNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK+ITSLPPPDTGADL Y   E+Q+AL
Sbjct: 631  EYNAFFYSLVSNDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDTGADLNYHTLEDQLAL 690

Query: 603  LNKVLSAGDDMVGLEQLQEDADDIALLKARRSFGSMSAMSGAKGMVYMEYNTGRGGRPGQ 424
            L KVL+AGDD VGLEQL+EDADDI LLKARRS GSMSAMSGA GMVYMEY+TGRG +  Q
Sbjct: 691  LTKVLNAGDDAVGLEQLEEDADDITLLKARRSVGSMSAMSGASGMVYMEYSTGRGKQGMQ 750

Query: 423  GQLKSKPKDPSKRHSLFKKRF 361
            GQ+KSKP+DP+KRH+LFKKRF
Sbjct: 751  GQMKSKPRDPTKRHNLFKKRF 771


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  229 bits (585), Expect = 4e-58
 Identities = 114/141 (80%), Positives = 125/141 (88%)
 Frame = -3

Query: 783  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDTGADLGYSRHEEQMAL 604
            EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G DL Y   +EQ+AL
Sbjct: 627  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPLDSGPDLSYYHLDEQLAL 686

Query: 603  LNKVLSAGDDMVGLEQLQEDADDIALLKARRSFGSMSAMSGAKGMVYMEYNTGRGGRPGQ 424
            L KVL+AGDD VGLEQL+EDADDIAL KARRS GSMSAMSGAKGMVYMEY+TGR    GQ
Sbjct: 687  LAKVLNAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGAKGMVYMEYSTGRNKLAGQ 746

Query: 423  GQLKSKPKDPSKRHSLFKKRF 361
            G +KSKPKDP+KRH LFK+R+
Sbjct: 747  GHIKSKPKDPAKRHYLFKRRY 767


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score =  228 bits (580), Expect = 1e-57
 Identities = 116/142 (81%), Positives = 126/142 (88%)
 Frame = -3

Query: 783  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDTGADLGYSRHEEQMAL 604
            EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D GA+L Y R ++Q+AL
Sbjct: 585  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGAELSYHRLDDQLAL 644

Query: 603  LNKVLSAGDDMVGLEQLQEDADDIALLKARRSFGSMSAMSGAKGMVYMEYNTGRGGRPGQ 424
            L KVL+AGDDMVGLEQL++DAD IAL  ARRS GSMSAMSGA GMVYMEY+TGR    GQ
Sbjct: 645  LGKVLNAGDDMVGLEQLEDDADQIALDAARRSKGSMSAMSGANGMVYMEYSTGR-KLAGQ 703

Query: 423  GQLKSKPKDPSKRHSLFKKRFA 358
            GQLKSKPKDP+KRH LFKKRFA
Sbjct: 704  GQLKSKPKDPAKRHHLFKKRFA 725