BLASTX nr result

ID: Coptis25_contig00000814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000814
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298994.1| predicted protein [Populus trichocarpa] gi|1...   150   7e-34
ref|XP_004153846.1| PREDICTED: uncharacterized protein LOC101218...   143   7e-32
ref|NP_001237273.1| uncharacterized protein LOC100499876 [Glycin...   140   6e-31
ref|XP_002528534.1| conserved hypothetical protein [Ricinus comm...   139   1e-30
ref|NP_001237007.1| uncharacterized protein LOC100306066 [Glycin...   139   2e-30

>ref|XP_002298994.1| predicted protein [Populus trichocarpa] gi|118484433|gb|ABK94093.1|
           unknown [Populus trichocarpa]
           gi|222846252|gb|EEE83799.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  150 bits (378), Expect = 7e-34
 Identities = 81/166 (48%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
 Frame = +1

Query: 271 NSNPSLYSKRTRHVHKSRAPQKFTIFAVTXXXXXXXXXXXXIPSWAQPDSDEPPPWAQDE 450
           +SN S    R  + +  +  +KF + A T            IPSWA+PDSDEPPPWA+ E
Sbjct: 31  DSNQSTVKSRGSY-YAYQKQKKFFVCAATEGSAKSSKSEETIPSWAKPDSDEPPPWAKGE 89

Query: 451 GKE-SLQQTYEAPFYVYLLXXXXXXXXXXXXXFEFINQKPVFGVVNPDNIFYTPLLGFFA 627
           GKE S +Q +E PF+VYLL             FE++NQ+PVFGVVNPD+IFY PLLGFFA
Sbjct: 90  GKENSSKQNFEVPFFVYLLASAITAIAAIGSIFEYVNQRPVFGVVNPDSIFYAPLLGFFA 149

Query: 628 ITGXXXXXXXXXXXXXXXXXXXAFLWFKSVQAANKAGEEQDRKDGY 765
            TG                   AFLWFKSVQAANK  EEQDR+DG+
Sbjct: 150 FTG---------------IPFSAFLWFKSVQAANKEAEEQDRRDGF 180


>ref|XP_004153846.1| PREDICTED: uncharacterized protein LOC101218426 [Cucumis sativus]
           gi|449490678|ref|XP_004158675.1| PREDICTED:
           uncharacterized protein LOC101229448 [Cucumis sativus]
          Length = 172

 Score =  143 bits (361), Expect = 7e-32
 Identities = 72/146 (49%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +1

Query: 331 QKFTIFAVTXXXXXXXXXXXXIPSWAQPDSDEPPPWAQDEGKE-SLQQTYEAPFYVYLLX 507
           +K T+FAVT            IPSWA+ DS+EPPPWA++EGKE   QQ ++ PFYVYLL 
Sbjct: 41  RKLTVFAVTEGSAKSSESEETIPSWAKLDSEEPPPWAKEEGKEIGTQQGFQVPFYVYLLA 100

Query: 508 XXXXXXXXXXXXFEFINQKPVFGVVNPDNIFYTPLLGFFAITGXXXXXXXXXXXXXXXXX 687
                       FE++NQKPVFG++N D+I Y PLLGFFA+TG                 
Sbjct: 101 SSITAIAAIGSVFEYVNQKPVFGIINSDSILYAPLLGFFALTG---------------IP 145

Query: 688 XXAFLWFKSVQAANKAGEEQDRKDGY 765
             AFLWFKSV+ ANK  E+QDR+DGY
Sbjct: 146 TAAFLWFKSVEVANKEAEDQDRRDGY 171


>ref|NP_001237273.1| uncharacterized protein LOC100499876 [Glycine max]
           gi|255627331|gb|ACU14010.1| unknown [Glycine max]
          Length = 177

 Score =  140 bits (353), Expect = 6e-31
 Identities = 71/152 (46%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
 Frame = +1

Query: 316 KSRAPQKFTIFAVTXXXXXXXXXXXXIPSWAQPDSDEPPPWAQDE--GKESLQQTYEAPF 489
           K + P +  + AVT            IPSWA+PDSDEPPPWA+DE     S Q+ +E PF
Sbjct: 40  KRKTPHRLVVVAVTQGSAESSKSDEKIPSWAKPDSDEPPPWARDEPNNNSSQQEGFEIPF 99

Query: 490 YVYLLXXXXXXXXXXXXXFEFINQKPVFGVVNPDNIFYTPLLGFFAITGXXXXXXXXXXX 669
           Y YL              FE++NQKPVFGV++ D++FY PLLGFF  TG           
Sbjct: 100 YAYLFASAITAIAAIGSIFEYVNQKPVFGVLSSDSVFYAPLLGFFVFTG----------- 148

Query: 670 XXXXXXXXAFLWFKSVQAANKAGEEQDRKDGY 765
                   AFLWFKSVQAANK  EEQD++DGY
Sbjct: 149 ----IPSSAFLWFKSVQAANKEAEEQDKRDGY 176


>ref|XP_002528534.1| conserved hypothetical protein [Ricinus communis]
           gi|223532036|gb|EEF33846.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  139 bits (351), Expect = 1e-30
 Identities = 71/146 (48%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = +1

Query: 331 QKFTIFAVTXXXXXXXXXXXXIPSWAQPDSDEPPPWAQDEGK-ESLQQTYEAPFYVYLLX 507
           ++ T+FA T            IP+WA+PDSDEPPPWA+DEG   S +QT E PF+VYLL 
Sbjct: 45  KRLTVFAATEGSADSSKSEENIPTWAKPDSDEPPPWARDEGSGNSAEQTVEIPFFVYLLA 104

Query: 508 XXXXXXXXXXXXFEFINQKPVFGVVNPDNIFYTPLLGFFAITGXXXXXXXXXXXXXXXXX 687
                       FE+ NQ PVFG++  D+IFY PLLGFFA TG                 
Sbjct: 105 SAITAIAAIGSVFEYANQNPVFGILKSDSIFYAPLLGFFAFTG---------------IP 149

Query: 688 XXAFLWFKSVQAANKAGEEQDRKDGY 765
             AFLWFKSVQ ANK  EEQD++DGY
Sbjct: 150 TSAFLWFKSVQVANKEAEEQDKRDGY 175


>ref|NP_001237007.1| uncharacterized protein LOC100306066 [Glycine max]
           gi|255627429|gb|ACU14059.1| unknown [Glycine max]
          Length = 182

 Score =  139 bits (349), Expect = 2e-30
 Identities = 73/175 (41%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
 Frame = +1

Query: 262 NSKNSNP-SLYSKRTRHVHKSRAPQKFTIFAVTXXXXXXXXXXXXIPSWAQPDSDEPPPW 438
           N   S+P + +    ++  K + P +  + AVT            IPSWA+PDSDEPPPW
Sbjct: 22  NQHASHPRTFFGVPHKNQRKRKTPHRLVVVAVTQGSAESSKSDEKIPSWAKPDSDEPPPW 81

Query: 439 AQDE------GKESLQQTYEAPFYVYLLXXXXXXXXXXXXXFEFINQKPVFGVVNPDNIF 600
           A+DE           ++ +E PFY YLL             FE++NQ+PVFGV++ D++F
Sbjct: 82  ARDEPNNKNSNNSQQEEEFEIPFYAYLLASAITAIAAIGSIFEYVNQRPVFGVLSSDSVF 141

Query: 601 YTPLLGFFAITGXXXXXXXXXXXXXXXXXXXAFLWFKSVQAANKAGEEQDRKDGY 765
           Y PLLGFF  TG                   AFLWFKSVQAANK  EEQD+KDGY
Sbjct: 142 YAPLLGFFVFTG---------------IPSSAFLWFKSVQAANKEAEEQDKKDGY 181


Top