BLASTX nr result
ID: Coptis25_contig00000812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000812
(287 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002870774.1| predicted protein [Arabidopsis lyrata subsp.... 111 7e-23
ref|NP_568565.2| uncharacterized protein [Arabidopsis thaliana] ... 103 2e-20
gb|AAN60241.1| unknown [Arabidopsis thaliana] 103 2e-20
ref|XP_001770325.1| predicted protein [Physcomitrella patens sub... 81 1e-13
ref|XP_003618539.1| hypothetical protein MTR_6g012780 [Medicago ... 75 4e-12
>ref|XP_002870774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316610|gb|EFH47033.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 111 bits (277), Expect = 7e-23
Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +1
Query: 10 RPSYGQPEEQE-GYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTSGYE 186
+PSYG+ EEQE GY+KPSY R + +EEGYRKPSYGR+EE+EEGY+KPSYGR+
Sbjct: 199 KPSYGRSEEQEEGYRKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGRS---- 250
Query: 187 QNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
EEEEGY+KPSYGR+ EE Y+KPSYG
Sbjct: 251 -EEEEEGYRKPSYGRSE----EEEGSYRKPSYG 278
Score = 108 bits (271), Expect = 4e-22
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 13/107 (12%)
Frame = +1
Query: 4 YGRPSYGQPEEQE-GYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTSG 180
Y +PSYG+ EEQE GY+KPSY R + +EEGYRKPSYGR+EEEEEGY+KPSYGR+
Sbjct: 212 YRKPSYGRSEEQEEGYRKPSYGR----SEEQEEGYRKPSYGRSEEEEEGYRKPSYGRS-- 265
Query: 181 YEQNEEEEGYKKPSYGRT-----SYEQPG-------EEEVYKKPSYG 285
EEE Y+KPSYGR+ SY +P EE Y+KPSYG
Sbjct: 266 ---EEEEGSYRKPSYGRSEDQVESYIKPSYGRSEEQEEGSYRKPSYG 309
Score = 84.3 bits (207), Expect = 9e-15
Identities = 51/116 (43%), Positives = 64/116 (55%), Gaps = 21/116 (18%)
Frame = +1
Query: 1 SYGRPSYGQPEEQEGYQKPSYERPS-SYEQPREEGY---------RKPSYGRNEEEEEGY 150
SYG G+ E + Y R Y + E GY RKPSYGR+EE+EEGY
Sbjct: 153 SYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGYGGRSETEYERKPSYGRSEEQEEGY 212
Query: 151 KKPSYGRTSGYEQNEEEEGYKKPSYGRTSYEQPG-----------EEEVYKKPSYG 285
+KPSYGR+ E+EEGY+KPSYGR+ ++ G EEE Y+KPSYG
Sbjct: 213 RKPSYGRS-----EEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEEEEGYRKPSYG 263
Score = 78.2 bits (191), Expect = 7e-13
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Frame = +1
Query: 1 SYGRPSYGQPEEQ-EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEG-YKKPSYGRT 174
SY +PSYG+ E+Q E Y KPSY R E+ E YRKPSYGR+EE+EEG Y+KPSYGR
Sbjct: 271 SYRKPSYGRSEDQVESYIKPSYGRS---EEQEEGSYRKPSYGRSEEQEEGSYRKPSYGRG 327
Query: 175 SGYEQNEEEEGY------KKPSYGRTSY--EQPGEEEVYKKPSY 282
+ + +E+ ++ SYGR Y E+E KK Y
Sbjct: 328 NDDDDDEQRRNRSGSGDDEEGSYGRKKYGDNDSDEDEEKKKHRY 371
>ref|NP_568565.2| uncharacterized protein [Arabidopsis thaliana]
gi|75171219|sp|Q9FKA5.1|Y5957_ARATH RecName:
Full=Uncharacterized protein At5g39570
gi|9758332|dbj|BAB08888.1| unnamed protein product
[Arabidopsis thaliana] gi|16604364|gb|AAL24188.1|
AT5g39570/MIJ24_40 [Arabidopsis thaliana]
gi|23308191|gb|AAN18065.1| At5g39570/MIJ24_40
[Arabidopsis thaliana] gi|332007065|gb|AED94448.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 381
Score = 103 bits (256), Expect = 2e-20
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Frame = +1
Query: 4 YGRPSYGQPEEQ-EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEG-YKKPSYGRTS 177
Y +PSYG+ EEQ EGY+KPSY R E+ +EEGYRKPSYGR+EE+EEG Y+KPSYGR+
Sbjct: 221 YRKPSYGRSEEQEEGYRKPSYGRS---EEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRS- 276
Query: 178 GYEQNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
+++ E Y KPSYGR+ ++ G Y+KPSYG
Sbjct: 277 ----DDQVESYIKPSYGRSEEQEEGS---YRKPSYG 305
Score = 102 bits (253), Expect = 4e-20
Identities = 53/89 (59%), Positives = 64/89 (71%)
Frame = +1
Query: 19 YGQPEEQEGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTSGYEQNEE 198
YG E E +KPSY R + +EEGYRKPSYGR+EE+EEGY+KPSYGR+ E+
Sbjct: 182 YGGRSESEYERKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGRS-----EEQ 232
Query: 199 EEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
EEGY+KPSYGR+ EQ EE Y+KPSYG
Sbjct: 233 EEGYRKPSYGRSEEEQ---EEGYRKPSYG 258
Score = 92.0 bits (227), Expect = 4e-17
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Frame = +1
Query: 4 YGRPSYGQPEEQ--EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTS 177
Y +PSYG+ EE+ EGY+KPSY R E+ E YRKPSYGR++++ E Y KPSYGR+
Sbjct: 236 YRKPSYGRSEEEQEEGYRKPSYGRS---EEQEEGSYRKPSYGRSDDQVESYIKPSYGRS- 291
Query: 178 GYEQNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
+ +EE Y+KPSYGR+ ++ G K+PSYG
Sbjct: 292 ---EEQEEGSYRKPSYGRSEEQEEGSYR--KQPSYG 322
Score = 71.2 bits (173), Expect = 8e-11
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Frame = +1
Query: 1 SYGRPSYGQPEEQ-EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEG--YKKPSYGR 171
SY +PSYG+ ++Q E Y KPSY R E+ E YRKPSYGR+EE+EEG K+PSYGR
Sbjct: 267 SYRKPSYGRSDDQVESYIKPSYGRS---EEQEEGSYRKPSYGRSEEQEEGSYRKQPSYGR 323
Query: 172 TSGYEQNEEEEGY------KKPSYGRTSY--EQPGEEEVYKK 273
+ + +E+ ++ SYGR Y E+E KK
Sbjct: 324 GNDDDDDEQRRNRSGSGDDEEGSYGRKKYGGNDSDEDEEKKK 365
>gb|AAN60241.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 103 bits (256), Expect = 2e-20
Identities = 55/96 (57%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Frame = +1
Query: 4 YGRPSYGQPEEQ-EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEG-YKKPSYGRTS 177
Y +PSYG+ EEQ EGY+KPSY R E+ +EEGYRKPSYGR+EE+EEG Y+KPSYGR+
Sbjct: 221 YRKPSYGRSEEQEEGYRKPSYGRS---EEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRS- 276
Query: 178 GYEQNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
+++ E Y KPSYGR+ ++ G Y+KPSYG
Sbjct: 277 ----DDQVESYIKPSYGRSEEQEEGS---YRKPSYG 305
Score = 102 bits (253), Expect = 4e-20
Identities = 53/89 (59%), Positives = 64/89 (71%)
Frame = +1
Query: 19 YGQPEEQEGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTSGYEQNEE 198
YG E E +KPSY R + +EEGYRKPSYGR+EE+EEGY+KPSYGR+ E+
Sbjct: 182 YGGRSESEYERKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGRS-----EEQ 232
Query: 199 EEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
EEGY+KPSYGR+ EQ EE Y+KPSYG
Sbjct: 233 EEGYRKPSYGRSEEEQ---EEGYRKPSYG 258
Score = 92.0 bits (227), Expect = 4e-17
Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Frame = +1
Query: 4 YGRPSYGQPEEQ--EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTS 177
Y +PSYG+ EE+ EGY+KPSY R E+ E YRKPSYGR++++ E Y KPSYGR+
Sbjct: 236 YRKPSYGRSEEEQEEGYRKPSYGRS---EEQEEGSYRKPSYGRSDDQVESYIKPSYGRS- 291
Query: 178 GYEQNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
+ +EE Y+KPSYGR+ ++ G K+PSYG
Sbjct: 292 ---EEQEEGSYRKPSYGRSEEQEEGSYR--KQPSYG 322
Score = 71.2 bits (173), Expect = 8e-11
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Frame = +1
Query: 1 SYGRPSYGQPEEQ-EGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEG--YKKPSYGR 171
SY +PSYG+ ++Q E Y KPSY R E+ E YRKPSYGR+EE+EEG K+PSYGR
Sbjct: 267 SYRKPSYGRSDDQVESYIKPSYGRS---EEQEEGSYRKPSYGRSEEQEEGSYRKQPSYGR 323
Query: 172 TSGYEQNEEEEGY------KKPSYGRTSY--EQPGEEEVYKK 273
+ + +E+ ++ SYGR Y E+E KK
Sbjct: 324 GNDDDDDEQRRNRSGSGDDEEGSYGRKKYGGNDSDEDEEKKK 365
>ref|XP_001770325.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678356|gb|EDQ64815.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 388
Score = 80.9 bits (198), Expect = 1e-13
Identities = 52/100 (52%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
Frame = +1
Query: 10 RPSYGQPEEQEGYQKPSYERPSSYEQPREEGYRK--PSYGRNEEEEEGYKK--PSYGRTS 177
RPSYG EE+ GY+KP RP+ E+ E GYRK PSYG E EE GY+K PSYG
Sbjct: 155 RPSYGGEEEESGYRKP---RPAYGEEEEESGYRKPRPSYGEEESEEGGYRKSRPSYG--- 208
Query: 178 GYEQNEEEEGYKK--PSYGRTSYEQPGEEEVYKK--PSYG 285
E+ EE GY+K PSYG E+ EE Y+K PSYG
Sbjct: 209 --EEESEEGGYRKSRPSYG----EEESEEGGYRKSRPSYG 242
Score = 76.3 bits (186), Expect = 3e-12
Identities = 52/111 (46%), Positives = 62/111 (55%), Gaps = 19/111 (17%)
Frame = +1
Query: 10 RPSYGQPEEQEGYQKPSYERPSSYEQPREEG-YRK--PSYGRNEEEEEGYKK--PSYG-- 168
RP+YG+ EE+ GY+KP RPS E+ EEG YRK PSYG E EE GY+K PSYG
Sbjct: 171 RPAYGEEEEESGYRKP---RPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEE 227
Query: 169 ----------RTSGYEQNEEEEGYKK--PSYGRTSYEQPGEEEVYKKPSYG 285
R S E+ EE GY+K PSYG E+ G + KP YG
Sbjct: 228 ESEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEEESEEGGYRK--PKPKYG 276
Score = 68.6 bits (166), Expect = 5e-10
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Frame = +1
Query: 10 RPSYGQPEEQEGYQKPSYERPSSYEQPREEG-YRK--PSYGRNEEEEEGYKK--PSYGRT 174
RPSYG+ E +EG + S RPS E+ EEG YRK PSYG E EE GY+K PSYG
Sbjct: 204 RPSYGEEESEEGGYRKS--RPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKSRPSYG-- 259
Query: 175 SGYEQNEEEEGYKKPSYGRTSYEQPGEEEVYKKPSYG 285
E+ EE GY+KP + Y E Y++ YG
Sbjct: 260 ---EEESEEGGYRKP---KPKYGDDEEVSDYRRSGYG 290
Score = 60.8 bits (146), Expect = 1e-07
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +1
Query: 25 QPEEQEGYQKPSYERPSSYEQPREEGYRK--PSYGRNEEEEEGYKKPSYGRTSGYEQNEE 198
+P E E RPS + E GYRK P+YG EEEE GY+KP R S E+ E
Sbjct: 141 RPSEDEAQPDYGRHRPSYGGEEEESGYRKPRPAYG-EEEEESGYRKP---RPSYGEEESE 196
Query: 199 EEGYKK--PSYGRTSYEQPGEEEVYKK--PSYG 285
E GY+K PSYG E+ EE Y+K PSYG
Sbjct: 197 EGGYRKSRPSYG----EEESEEGGYRKSRPSYG 225
Score = 55.5 bits (132), Expect = 5e-06
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 10 RPSYGQPEEQEG-YQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRTSGYE 186
RPSYG+ E +EG Y+KP +P + YR+ YG EEEE GY++P + + E
Sbjct: 255 RPSYGEEESEEGGYRKP---KPKYGDDEEVSDYRRSGYG--EEEESGYREP---KPTYNE 306
Query: 187 QNEEEEGYKKPSYGRTSYEQPGEEEVY 267
+ EE G+++ YG E P EE Y
Sbjct: 307 EESEESGHRRSRYGEE--EAPAEEGGY 331
>ref|XP_003618539.1| hypothetical protein MTR_6g012780 [Medicago truncatula]
gi|355493554|gb|AES74757.1| hypothetical protein
MTR_6g012780 [Medicago truncatula]
Length = 411
Score = 75.5 bits (184), Expect = 4e-12
Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Frame = +1
Query: 1 SYGRP-SYGQPEEQEGYQKPSYERPSSYEQP---REEGYRKPSYGRNEEEEEGYKKPSYG 168
SYGR SYG+ +E+E KPSY R E+P R E RKPSYGR+++EE KPSYG
Sbjct: 276 SYGRKTSYGRSDEEE---KPSYGRSDEEEKPSYGRSEYERKPSYGRSDDEE----KPSYG 328
Query: 169 RTS-----GYEQNEEEEGYKKPSYGR-TSYEQPGEEEVYKKPSYG 285
RT Y ++++EE KPSYGR TSY + +EE KPSYG
Sbjct: 329 RTEYERKPSYGRSDDEE---KPSYGRKTSYGRSDDEE---KPSYG 367
Score = 73.9 bits (180), Expect = 1e-11
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Frame = +1
Query: 10 RPSYGQPEEQEGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEE-------EGYKKPSYG 168
+PSYG+ +E+E KPSY R +SY + EE KPSYGR++EEE E +KPSYG
Sbjct: 263 KPSYGRSDEEE---KPSYGRKTSYGRSDEE--EKPSYGRSDEEEKPSYGRSEYERKPSYG 317
Query: 169 RTSGYEQNEEEEGYKKPSYGRTSYEQP---GEEEVYKKPSYG 285
R +++EE KPSYGRT YE+ G + +KPSYG
Sbjct: 318 R------SDDEE---KPSYGRTEYERKPSYGRSDDEEKPSYG 350
Score = 73.6 bits (179), Expect = 2e-11
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Frame = +1
Query: 4 YGRPSY---GQPEEQEGYQKPSYERPSSYEQPREEGYRKPSYGRNEEEEEGYKKPSYGRT 174
YGR + G+ E G +K Y Y R E RKPSYGR++EEE KPSYGR
Sbjct: 225 YGRKNEYESGESEYGSGRKKSGYGEEEGYGGGRSEYERKPSYGRSDEEE----KPSYGRK 280
Query: 175 SGYEQNEEEEGYKKPSYGRTSYEQP---GEEEVYKKPSYG 285
+ Y +++EEE KPSYGR+ E+ G E +KPSYG
Sbjct: 281 TSYGRSDEEE---KPSYGRSDEEEKPSYGRSEYERKPSYG 317
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +1
Query: 1 SYGR------PSYGQPEEQEGYQKPSYERPSSYEQPREEGYRKPSYG--RNEEEEEGYKK 156
SYGR PSYG+ +++E KPSY R +SY + +E KPSYG R +++EGY +
Sbjct: 326 SYGRTEYERKPSYGRSDDEE---KPSYGRKTSYGRSDDE--EKPSYGSERRGDDDEGYGR 380
Query: 157 PSYGRTSGYEQNEEEEGYKKPSYGRTSYE 243
YG G + +E + + S+ SY+
Sbjct: 381 KKYGGNDGSDDDEGRKKHHHKSHHHKSYD 409